RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 SEC11BP0C7V7 166 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 NEGR1Q7Z3B1 354 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 OR10G4Q8NGN3 311 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 OR10G9Q8NGN4 311 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 OR10G7Q8NGN6 311 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 STOML3Q8TAV4 291 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 PCNPQ8WW12 178 aaKnown RBP13.31□□□□□ -0.28
ITGA4-202ENST00000339307 SCRT2Q9NQ03 307 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 PGPA6NDG6 321 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 EREGO14944 169 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 TPT1P13693 172 aaKnown RBP13.3□□□□□ -0.28
ITGA4-202ENST00000339307 SRIP30626 198 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 FAM74A1Q5RGS3 127 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 ZNF479Q96JC4 524 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 SH3BGRL3Q9H299 93 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 TNFRSF18Q9Y5U5 241 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 TRGV11A0A075B6L2 103 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 EIF5AL1Q6IS14 154 aaKnown RBP13.3□□□□□ -0.28
ITGA4-202ENST00000339307 SLC51BQ86UW2 128 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 TRAV9-2A0A087WT02 112 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 UMAD1C9J7I0 102 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 AKR1C8PQ5T2L2 129 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 PQLC2Q6ZP29 291 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 C9orf62Q8N4C0 152 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 SPXQ9BT56 116 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 OTORQ9NRC9 128 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 GYPEP15421 78 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 FUSP35637 526 aaKnown RBP eCLIP13.28□□□□□ -0.28
ITGA4-202ENST00000339307 CDC34P49427 236 aaPredicted RBP13.28□□□□□ -0.28
ITGA4-202ENST00000339307 ERVFC1-1P60608 527 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 RAB2AP61019 212 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 Q6AWC8 147 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 GOLT1AQ6ZVE7 132 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 Q8N1X5 172 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 ACTR3CQ9C0K3 210 aaPredicted RBP13.28□□□□□ -0.28
ITGA4-202ENST00000339307 LENEPQ9Y5L5 61 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 LY96Q9Y6Y9 160 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 HSPG2P98160 4391 aa13.27□□□□□ -0.29
ITGA4-202ENST00000339307 K7EQD1 137 aa13.27□□□□□ -0.29
ITGA4-202ENST00000339307 HMGB3O15347 200 aaKnown RBP13.27□□□□□ -0.29
ITGA4-202ENST00000339307 GNRH2O43555 120 aa13.27□□□□□ -0.29
ITGA4-202ENST00000339307 OR4C5Q8NGB2 326 aa13.27□□□□□ -0.29
ITGA4-202ENST00000339307 LRP1BQ9NZR2 4599 aa13.26□□□□□ -0.29
ITGA4-202ENST00000339307 F6UZH7 168 aa13.26□□□□□ -0.29
ITGA4-202ENST00000339307 Q6ZRN7 208 aaPredicted RBP13.26□□□□□ -0.29
ITGA4-202ENST00000339307 NFE4Q86UQ8 179 aa13.26□□□□□ -0.29
ITGA4-202ENST00000339307 RASL10AQ92737 203 aa13.26□□□□□ -0.29
ITGA4-202ENST00000339307 ORM1P02763 201 aa13.25□□□□□ -0.29
ITGA4-202ENST00000339307 STAG3L2P0CL84 134 aa13.25□□□□□ -0.29
ITGA4-202ENST00000339307 STAG3L3P0CL85 134 aa13.25□□□□□ -0.29
ITGA4-202ENST00000339307 DPPA3Q6W0C5 159 aa13.25□□□□□ -0.29
ITGA4-202ENST00000339307 RAB24Q969Q5 203 aa13.25□□□□□ -0.29
ITGA4-202ENST00000339307 TREM1Q9NP99 234 aa13.25□□□□□ -0.29
ITGA4-202ENST00000339307 TRAV8-1A0A0A6YYK1 113 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 C9JCJ5 164 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 EVI2AP22794 236 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 GNG5P63218 68 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 WFDC10BQ8IUB3 73 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 IQCF2Q8IXL9 164 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 TMED6Q8WW62 240 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 TXNDC17Q9BRA2 123 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 PGPEP1Q9NXJ5 209 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 TRAV21A0A0B4J279 112 aa13.23□□□□□ -0.29
ITGA4-202ENST00000339307 CTXND1A0A1B0GTU2 59 aa13.23□□□□□ -0.29
ITGA4-202ENST00000339307 M0R2P5 195 aa13.23□□□□□ -0.29
ITGA4-202ENST00000339307 RAB5CP51148 216 aa13.23□□□□□ -0.29
ITGA4-202ENST00000339307 SGK494Q96LW2 274 aa13.23□□□□□ -0.29
ITGA4-202ENST00000339307 SDF2L1Q9HCN8 221 aa13.23□□□□□ -0.29
ITGA4-202ENST00000339307 TRAV4A0A0B4J268 109 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 IGHV3-16A0A0C4DH30 117 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 CXorf1O96002 111 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 NHLRC2Q8NBF2 726 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 SUN5Q8TC36 379 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 NDFIP1Q9BT67 221 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 TMEM167BQ9NRX6 74 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 MSRB1Q9NZV6 116 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 LOC100131303A0A0U1RQF7 123 aa13.21□□□□□ -0.3
ITGA4-202ENST00000339307 TYMSP04818 313 aa13.21□□□□□ -0.3
ITGA4-202ENST00000339307 DNAH10OSP0CZ25 163 aa13.21□□□□□ -0.3
ITGA4-202ENST00000339307 TDRG1Q3Y452 100 aa13.21□□□□□ -0.3
ITGA4-202ENST00000339307 KCNS1Q96KK3 526 aa13.21□□□□□ -0.3
ITGA4-202ENST00000339307 ARL14EPLP0DKL9 152 aa13.2□□□□□ -0.3
ITGA4-202ENST00000339307 PPT1P50897 306 aa13.2□□□□□ -0.3
ITGA4-202ENST00000339307 ARL6IP6Q8N6S5 226 aa13.2□□□□□ -0.3
ITGA4-202ENST00000339307 TVP23CQ96ET8 276 aa13.2□□□□□ -0.3
ITGA4-202ENST00000339307 CRYGDP07320 174 aa13.19□□□□□ -0.3
ITGA4-202ENST00000339307 NKX2-5P52952 324 aaPredicted RBP13.19□□□□□ -0.3
ITGA4-202ENST00000339307 ZNF726P1Q15940 193 aa13.19□□□□□ -0.3
ITGA4-202ENST00000339307 A0A087WTM6 91 aa13.18□□□□□ -0.3
ITGA4-202ENST00000339307 GCHFRP30047 84 aa13.18□□□□□ -0.3
ITGA4-202ENST00000339307 SULT1A2P50226 295 aa13.18□□□□□ -0.3
ITGA4-202ENST00000339307 MBD3L1Q8WWY6 194 aa13.18□□□□□ -0.3
ITGA4-202ENST00000339307 DNAH5Q8TE73 4624 aa13.17□□□□□ -0.3
ITGA4-202ENST00000339307 IGHV3-73A0A0B4J1V6 119 aa13.17□□□□□ -0.3
ITGA4-202ENST00000339307 K7EQM0 130 aa13.17□□□□□ -0.3
ITGA4-202ENST00000339307 CDPF1Q6NVV7 123 aa13.17□□□□□ -0.3
ITGA4-202ENST00000339307 MAP1LC3B2A6NCE7 125 aa13.16□□□□□ -0.3
ITGA4-202ENST00000339307 FBLL1A6NHQ2 334 aaKnown RBP13.16□□□□□ -0.3
ITGA4-202ENST00000339307 EPM2AB3EWF7 344 aa13.16□□□□□ -0.3
ITGA4-202ENST00000339307 K7EP13 123 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms