RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 SEC11BP0C7V7 166 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 NEGR1Q7Z3B1 354 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 OR10G4Q8NGN3 311 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 OR10G9Q8NGN4 311 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 OR10G7Q8NGN6 311 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 STOML3Q8TAV4 291 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 PCNPQ8WW12 178 aaKnown RBP13.31□□□□□ -0.28
ITGA4-202ENST00000339307 SCRT2Q9NQ03 307 aa13.31□□□□□ -0.28
ITGA4-202ENST00000339307 PGPA6NDG6 321 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 EREGO14944 169 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 TPT1P13693 172 aaKnown RBP13.3□□□□□ -0.28
ITGA4-202ENST00000339307 SRIP30626 198 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 FAM74A1Q5RGS3 127 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 ZNF479Q96JC4 524 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 SH3BGRL3Q9H299 93 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 TNFRSF18Q9Y5U5 241 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 TRGV11A0A075B6L2 103 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 EIF5AL1Q6IS14 154 aaKnown RBP13.3□□□□□ -0.28
ITGA4-202ENST00000339307 SLC51BQ86UW2 128 aa13.3□□□□□ -0.28
ITGA4-202ENST00000339307 TRAV9-2A0A087WT02 112 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 UMAD1C9J7I0 102 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 AKR1C8PQ5T2L2 129 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 PQLC2Q6ZP29 291 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 C9orf62Q8N4C0 152 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 SPXQ9BT56 116 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 OTORQ9NRC9 128 aa13.29□□□□□ -0.28
ITGA4-202ENST00000339307 GYPEP15421 78 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 FUSP35637 526 aaKnown RBP eCLIP13.28□□□□□ -0.28
ITGA4-202ENST00000339307 CDC34P49427 236 aaPredicted RBP13.28□□□□□ -0.28
ITGA4-202ENST00000339307 ERVFC1-1P60608 527 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 RAB2AP61019 212 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 Q6AWC8 147 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 GOLT1AQ6ZVE7 132 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 Q8N1X5 172 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 ACTR3CQ9C0K3 210 aaPredicted RBP13.28□□□□□ -0.28
ITGA4-202ENST00000339307 LENEPQ9Y5L5 61 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 LY96Q9Y6Y9 160 aa13.28□□□□□ -0.28
ITGA4-202ENST00000339307 HSPG2P98160 4391 aa13.27□□□□□ -0.29
ITGA4-202ENST00000339307 K7EQD1 137 aa13.27□□□□□ -0.29
ITGA4-202ENST00000339307 HMGB3O15347 200 aaKnown RBP13.27□□□□□ -0.29
ITGA4-202ENST00000339307 GNRH2O43555 120 aa13.27□□□□□ -0.29
ITGA4-202ENST00000339307 OR4C5Q8NGB2 326 aa13.27□□□□□ -0.29
ITGA4-202ENST00000339307 LRP1BQ9NZR2 4599 aa13.26□□□□□ -0.29
ITGA4-202ENST00000339307 F6UZH7 168 aa13.26□□□□□ -0.29
ITGA4-202ENST00000339307 Q6ZRN7 208 aaPredicted RBP13.26□□□□□ -0.29
ITGA4-202ENST00000339307 NFE4Q86UQ8 179 aa13.26□□□□□ -0.29
ITGA4-202ENST00000339307 RASL10AQ92737 203 aa13.26□□□□□ -0.29
ITGA4-202ENST00000339307 ORM1P02763 201 aa13.25□□□□□ -0.29
ITGA4-202ENST00000339307 STAG3L2P0CL84 134 aa13.25□□□□□ -0.29
ITGA4-202ENST00000339307 STAG3L3P0CL85 134 aa13.25□□□□□ -0.29
ITGA4-202ENST00000339307 DPPA3Q6W0C5 159 aa13.25□□□□□ -0.29
ITGA4-202ENST00000339307 RAB24Q969Q5 203 aa13.25□□□□□ -0.29
ITGA4-202ENST00000339307 TREM1Q9NP99 234 aa13.25□□□□□ -0.29
ITGA4-202ENST00000339307 TRAV8-1A0A0A6YYK1 113 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 C9JCJ5 164 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 EVI2AP22794 236 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 GNG5P63218 68 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 WFDC10BQ8IUB3 73 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 IQCF2Q8IXL9 164 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 TMED6Q8WW62 240 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 TXNDC17Q9BRA2 123 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 PGPEP1Q9NXJ5 209 aa13.24□□□□□ -0.29
ITGA4-202ENST00000339307 TRAV21A0A0B4J279 112 aa13.23□□□□□ -0.29
ITGA4-202ENST00000339307 CTXND1A0A1B0GTU2 59 aa13.23□□□□□ -0.29
ITGA4-202ENST00000339307 M0R2P5 195 aa13.23□□□□□ -0.29
ITGA4-202ENST00000339307 RAB5CP51148 216 aa13.23□□□□□ -0.29
ITGA4-202ENST00000339307 SGK494Q96LW2 274 aa13.23□□□□□ -0.29
ITGA4-202ENST00000339307 SDF2L1Q9HCN8 221 aa13.23□□□□□ -0.29
ITGA4-202ENST00000339307 TRAV4A0A0B4J268 109 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 IGHV3-16A0A0C4DH30 117 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 CXorf1O96002 111 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 NHLRC2Q8NBF2 726 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 SUN5Q8TC36 379 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 NDFIP1Q9BT67 221 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 TMEM167BQ9NRX6 74 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 MSRB1Q9NZV6 116 aa13.22□□□□□ -0.29
ITGA4-202ENST00000339307 LOC100131303A0A0U1RQF7 123 aa13.21□□□□□ -0.3
ITGA4-202ENST00000339307 TYMSP04818 313 aa13.21□□□□□ -0.3
ITGA4-202ENST00000339307 DNAH10OSP0CZ25 163 aa13.21□□□□□ -0.3
ITGA4-202ENST00000339307 TDRG1Q3Y452 100 aa13.21□□□□□ -0.3
ITGA4-202ENST00000339307 KCNS1Q96KK3 526 aa13.21□□□□□ -0.3
ITGA4-202ENST00000339307 ARL14EPLP0DKL9 152 aa13.2□□□□□ -0.3
ITGA4-202ENST00000339307 PPT1P50897 306 aa13.2□□□□□ -0.3
ITGA4-202ENST00000339307 ARL6IP6Q8N6S5 226 aa13.2□□□□□ -0.3
ITGA4-202ENST00000339307 TVP23CQ96ET8 276 aa13.2□□□□□ -0.3
ITGA4-202ENST00000339307 CRYGDP07320 174 aa13.19□□□□□ -0.3
ITGA4-202ENST00000339307 NKX2-5P52952 324 aaPredicted RBP13.19□□□□□ -0.3
ITGA4-202ENST00000339307 ZNF726P1Q15940 193 aa13.19□□□□□ -0.3
ITGA4-202ENST00000339307 A0A087WTM6 91 aa13.18□□□□□ -0.3
ITGA4-202ENST00000339307 GCHFRP30047 84 aa13.18□□□□□ -0.3
ITGA4-202ENST00000339307 SULT1A2P50226 295 aa13.18□□□□□ -0.3
ITGA4-202ENST00000339307 MBD3L1Q8WWY6 194 aa13.18□□□□□ -0.3
ITGA4-202ENST00000339307 DNAH5Q8TE73 4624 aa13.17□□□□□ -0.3
ITGA4-202ENST00000339307 IGHV3-73A0A0B4J1V6 119 aa13.17□□□□□ -0.3
ITGA4-202ENST00000339307 K7EQM0 130 aa13.17□□□□□ -0.3
ITGA4-202ENST00000339307 CDPF1Q6NVV7 123 aa13.17□□□□□ -0.3
ITGA4-202ENST00000339307 MAP1LC3B2A6NCE7 125 aa13.16□□□□□ -0.3
ITGA4-202ENST00000339307 FBLL1A6NHQ2 334 aaKnown RBP13.16□□□□□ -0.3
ITGA4-202ENST00000339307 EPM2AB3EWF7 344 aa13.16□□□□□ -0.3
ITGA4-202ENST00000339307 K7EP13 123 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms