RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 ZNF575Q86XF7 245 aa6.58□□□□□ -1.36
LSAMP-201ENST00000333617 Q8N2B8 174 aa6.58□□□□□ -1.36
LSAMP-201ENST00000333617 FAM19A2Q8N3H0 131 aa6.58□□□□□ -1.36
LSAMP-201ENST00000333617 TMEM86BQ8N661 226 aa6.58□□□□□ -1.36
LSAMP-201ENST00000333617 RNF152Q8N8N0 203 aa6.58□□□□□ -1.36
LSAMP-201ENST00000333617 CHCHD1Q96BP2 118 aaKnown RBP6.58□□□□□ -1.36
LSAMP-201ENST00000333617 DUX5Q96PT3 197 aa6.58□□□□□ -1.36
LSAMP-201ENST00000333617 PRO1933Q9H354 126 aa6.58□□□□□ -1.36
LSAMP-201ENST00000333617 MUC4Q99102 2169 aa6.58□□□□□ -1.36
LSAMP-201ENST00000333617 MUC21A0A0G2JKD1 596 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 MUC21A0A140T8X8 626 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 TMEM213A2RRL7 107 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 M0R2Z0 102 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 ID1P41134 155 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 TWIST1Q15672 202 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 MUC21Q5SSG8 566 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 FAM104BQ5XKR9 115 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 ZNF664Q8N3J9 261 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 URB1-AS1Q96HZ7 61 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 HECTD1Q9ULT8 2610 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 IGHV4OR15-8A0A075B7B6 117 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 A0A087WW49 117 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 IGKV3D-20A0A0C4DH25 116 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 M0QZ24 198 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 SRD5A1P18405 259 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 OR8A1Q8NGG7 326 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 CNFNQ9BYD5 112 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 C11orf21Q9P2W6 132 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 SELENOKQ9Y6D0 94 aa6.57□□□□□ -1.36
LSAMP-201ENST00000333617 LGALS9O00182 355 aa6.56□□□□□ -1.36
LSAMP-201ENST00000333617 LINC00614P0C842 121 aa6.56□□□□□ -1.36
LSAMP-201ENST00000333617 SYNJ2BPP57105 145 aa6.56□□□□□ -1.36
LSAMP-201ENST00000333617 DEFB1P60022 68 aa6.56□□□□□ -1.36
LSAMP-201ENST00000333617 AMN1Q8IY45 258 aa6.56□□□□□ -1.36
LSAMP-201ENST00000333617 KLHDC1Q8N7A1 406 aa6.56□□□□□ -1.36
LSAMP-201ENST00000333617 FOXC2Q99958 501 aa6.56□□□□□ -1.36
LSAMP-201ENST00000333617 TMEM191AQ9H0A3 160 aa6.56□□□□□ -1.36
LSAMP-201ENST00000333617 U3KQK5 164 aa6.56□□□□□ -1.36
LSAMP-201ENST00000333617 CUBNO60494 3623 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 TRAV21A0A0B4J279 112 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 IGHV1-24A0A0C4DH33 117 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 TRBV7-9A0A0J9YWB2 115 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 D6R8Y8 96 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 F6UB75 175 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 C3orf79P0CE67 100 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 RAB4AP20338 218 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 DDTP30046 118 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 HOXD3P31249 432 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-201ENST00000333617 PRR9Q5T870 116 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 TEX43Q6ZNM6 134 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 ORMDL3Q8N138 153 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 ZFAND2AQ8N6M9 145 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 DCANP1Q8TF63 244 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 FAM19A4Q96LR4 140 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 PRELID3AQ96N28 172 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 MS4A6AQ9H2W1 248 aa6.55□□□□□ -1.36
LSAMP-201ENST00000333617 DNAJC9-AS1A6NH13 148 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 C2orf70A6NJV1 201 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 J3KRW8 73 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 CD5LO43866 347 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 CSN3P07498 182 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 CKS2P33552 79 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 DEFA6Q01524 100 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 PMCHL1Q16048 86 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 MRPL51Q4U2R6 128 aaKnown RBP6.54□□□□□ -1.36
LSAMP-201ENST00000333617 Q6ZQT7 251 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 APRG1Q8IVJ8 170 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 Q8N976 141 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 YAE1D1Q9NRH1 226 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 MSRB1Q9NZV6 116 aa6.54□□□□□ -1.36
LSAMP-201ENST00000333617 OR5AL1P0C617 328 aa6.53□□□□□ -1.36
LSAMP-201ENST00000333617 BTF3P20290 206 aaKnown RBP6.53□□□□□ -1.36
LSAMP-201ENST00000333617 RNASE4P34096 147 aaKnown RBP6.53□□□□□ -1.36
LSAMP-201ENST00000333617 TFPI2P48307 235 aa6.53□□□□□ -1.36
LSAMP-201ENST00000333617 SNRPD3P62318 126 aaKnown RBP6.53□□□□□ -1.36
LSAMP-201ENST00000333617 CACNG7P62955 275 aa6.53□□□□□ -1.36
LSAMP-201ENST00000333617 CTAG1AP78358 180 aa6.53□□□□□ -1.36
LSAMP-201ENST00000333617 FA2HQ7L5A8 372 aa6.53□□□□□ -1.36
LSAMP-201ENST00000333617 SYT8Q8NBV8 401 aa6.53□□□□□ -1.36
LSAMP-201ENST00000333617 PRSS3P2Q8NHM4 247 aa6.53□□□□□ -1.36
LSAMP-201ENST00000333617 VAMP8Q9BV40 100 aa6.53□□□□□ -1.36
LSAMP-201ENST00000333617 KIR2DL5BA0A0G2JN68 375 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 KIR2DL5BA0A0G2JPC4 375 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 LINC01619G3V211 115 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 K7EQG2 157 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 SNAI2O43623 268 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 LEPROTL1O95214 131 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 PPBPP02775 128 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 ZNF688P0C7X2 276 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 SLURP1P55000 103 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 DEFB136Q30KP8 78 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 PSMG4Q5JS54 123 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 KHDC1LQ5JSQ8 128 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 SPANXN1Q5VSR9 72 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 EBLN2Q6P2I7 272 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 Q6ZSV7 163 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 C18orf65Q6ZTR6 163 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 SMIM15Q7Z3B0 74 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 KIR2DL5AQ8N109 375 aa6.52□□□□□ -1.36
LSAMP-201ENST00000333617 OR10AG1Q8NH19 301 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms