RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 URB1-AS1Q96HZ7 61 aa11.17□□□□□ -0.62
TPM3-205ENST00000328159 MSRB1Q9NZV6 116 aa11.17□□□□□ -0.62
TPM3-205ENST00000328159 A0A1W2PRX2 142 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 KLLNB2CW77 178 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 HSBP1O75506 76 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 EBLN2Q6P2I7 272 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 ODF3Q96PU9 254 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 JMJD8Q96S16 334 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 TMEM191AQ9H0A3 160 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 NOTCH2Q04721 2471 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 NDUFA7O95182 113 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 OR5AL1P0C617 328 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 LEPP41159 167 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 FHL3Q13643 280 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 FAM19A2Q8N3H0 131 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 OR10AG1Q8NH19 301 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 CITED2Q99967 270 aaPredicted RBP11.16□□□□□ -0.62
TPM3-205ENST00000328159 GSN-AS1Q9NRJ2 163 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 U3KQK5 164 aa11.16□□□□□ -0.62
TPM3-205ENST00000328159 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.62
TPM3-205ENST00000328159 SNAI2O43623 268 aa11.15□□□□□ -0.62
TPM3-205ENST00000328159 S100A12P80511 92 aa11.15□□□□□ -0.62
TPM3-205ENST00000328159 ANXA2RQ3ZCQ2 193 aa11.15□□□□□ -0.62
TPM3-205ENST00000328159 MRPL51Q4U2R6 128 aaKnown RBP11.15□□□□□ -0.62
TPM3-205ENST00000328159 DYNLRB2Q8TF09 96 aa11.15□□□□□ -0.62
TPM3-205ENST00000328159 TSSC4Q9Y5U2 329 aaPredicted RBP11.15□□□□□ -0.62
TPM3-205ENST00000328159 D6R8Y8 96 aa11.14□□□□□ -0.63
TPM3-205ENST00000328159 H3BVH4 76 aa11.14□□□□□ -0.63
TPM3-205ENST00000328159 CCL24O00175 119 aa11.14□□□□□ -0.63
TPM3-205ENST00000328159 DUSP14O95147 198 aaKnown RBP11.14□□□□□ -0.63
TPM3-205ENST00000328159 SCGB1D1O95968 90 aa11.14□□□□□ -0.63
TPM3-205ENST00000328159 CACNG7P62955 275 aa11.14□□□□□ -0.63
TPM3-205ENST00000328159 DMRTA1Q5VZB9 504 aa11.14□□□□□ -0.63
TPM3-205ENST00000328159 FOXI2Q6ZQN5 318 aa11.14□□□□□ -0.63
TPM3-205ENST00000328159 CHCHD1Q96BP2 118 aaKnown RBP11.14□□□□□ -0.63
TPM3-205ENST00000328159 TMEM61Q8N0U2 210 aa11.13□□□□□ -0.63
TPM3-205ENST00000328159 PRELID3AQ96N28 172 aa11.13□□□□□ -0.63
TPM3-205ENST00000328159 IGHV4-4A0A075B6R2 117 aa11.13□□□□□ -0.63
TPM3-205ENST00000328159 M0R2Z0 102 aa11.13□□□□□ -0.63
TPM3-205ENST00000328159 IGKV3-20P01619 116 aa11.13□□□□□ -0.63
TPM3-205ENST00000328159 ASIPP42127 132 aa11.13□□□□□ -0.63
TPM3-205ENST00000328159 DEFB114Q30KQ6 69 aa11.13□□□□□ -0.63
TPM3-205ENST00000328159 ORMDL3Q8N138 153 aa11.13□□□□□ -0.63
TPM3-205ENST00000328159 RNF185Q96GF1 192 aa11.13□□□□□ -0.63
TPM3-205ENST00000328159 RNF114Q9Y508 228 aa11.13□□□□□ -0.63
TPM3-205ENST00000328159 C7orf71A4D174 169 aa11.12□□□□□ -0.63
TPM3-205ENST00000328159 LINC00614P0C842 121 aa11.12□□□□□ -0.63
TPM3-205ENST00000328159 MED14OSP0DP75 135 aa11.12□□□□□ -0.63
TPM3-205ENST00000328159 RAB4AP20338 218 aa11.12□□□□□ -0.63
TPM3-205ENST00000328159 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
TPM3-205ENST00000328159 AGRNO00468 2067 aa11.12□□□□□ -0.63
TPM3-205ENST00000328159 SORL1Q92673 2214 aa11.12□□□□□ -0.63
TPM3-205ENST00000328159 S100A4P26447 101 aaKnown RBP11.11□□□□□ -0.63
TPM3-205ENST00000328159 CKS2P33552 79 aa11.11□□□□□ -0.63
TPM3-205ENST00000328159 KRTDAPP60985 99 aa11.11□□□□□ -0.63
TPM3-205ENST00000328159 TIMM8BQ9Y5J9 83 aaPredicted RBP11.11□□□□□ -0.63
TPM3-205ENST00000328159 NF1P21359 2839 aa11.11□□□□□ -0.63
TPM3-205ENST00000328159 TRAV12-3A0A0B4J271 114 aa11.11□□□□□ -0.63
TPM3-205ENST00000328159 GNRH2O43555 120 aa11.11□□□□□ -0.63
TPM3-205ENST00000328159 TSPOP30536 169 aa11.11□□□□□ -0.63
TPM3-205ENST00000328159 PROK1P58294 105 aa11.11□□□□□ -0.63
TPM3-205ENST00000328159 DEFB131AP59861 70 aa11.11□□□□□ -0.63
TPM3-205ENST00000328159 SMIM15Q7Z3B0 74 aa11.11□□□□□ -0.63
TPM3-205ENST00000328159 INAFM1C9JVW0 142 aa11.1□□□□□ -0.63
TPM3-205ENST00000328159 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
TPM3-205ENST00000328159 CD300EQ496F6 205 aaPredicted RBP11.1□□□□□ -0.63
TPM3-205ENST00000328159 SCRT2Q9NQ03 307 aa11.1□□□□□ -0.63
TPM3-205ENST00000328159 IGHV1-24A0A0C4DH33 117 aa11.09□□□□□ -0.63
TPM3-205ENST00000328159 KNCNA6PVL3 124 aa11.09□□□□□ -0.63
TPM3-205ENST00000328159 NCR2O95944 276 aa11.09□□□□□ -0.63
TPM3-205ENST00000328159 PPBPP02775 128 aa11.09□□□□□ -0.63
TPM3-205ENST00000328159 EVI2AP22794 236 aa11.09□□□□□ -0.63
TPM3-205ENST00000328159 CDKN1BP46527 198 aa11.09□□□□□ -0.63
TPM3-205ENST00000328159 FAM159AQ6UWV7 190 aa11.09□□□□□ -0.63
TPM3-205ENST00000328159 AMTNQ6UX39 209 aa11.09□□□□□ -0.63
TPM3-205ENST00000328159 PRSS3P2Q8NHM4 247 aa11.09□□□□□ -0.63
TPM3-205ENST00000328159 TRAV25A0A0B4J276 109 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 OR4C46A6NHA9 309 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 NPYP01303 97 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 PMCHL1Q16048 86 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 SPINK13Q1W4C9 94 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 FA2HQ7L5A8 372 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 SPAG8Q99932 426 aaPredicted RBP11.08□□□□□ -0.64
TPM3-205ENST00000328159 MAP6D1Q9H9H5 199 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 TRAV12-2A0A075B6T6 113 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 C3orf79P0CE67 100 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 RNASE3P12724 160 aaKnown RBP11.08□□□□□ -0.64
TPM3-205ENST00000328159 HLA-DRB4P13762 266 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 FOSL1P15407 271 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 SIGLEC8Q9NYZ4 499 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 PHLDA3Q9Y5J5 127 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 HLA-DRB4X5D2U9 266 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 WNK1Q9H4A3 2382 aa11.08□□□□□ -0.64
TPM3-205ENST00000328159 SETD2Q9BYW2 2564 aaPredicted RBP11.07□□□□□ -0.64
TPM3-205ENST00000328159 OTOGQ6ZRI0 2925 aa11.07□□□□□ -0.64
TPM3-205ENST00000328159 LOC389332A0A1B0GUA5 103 aa11.07□□□□□ -0.64
TPM3-205ENST00000328159 A8MTW9 85 aa11.07□□□□□ -0.64
TPM3-205ENST00000328159 ADARB2-AS1A8MUL3 147 aa11.07□□□□□ -0.64
TPM3-205ENST00000328159 M0R381 172 aa11.07□□□□□ -0.64
TPM3-205ENST00000328159 SPRY2O43597 315 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms