RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ERCC8Q13216 396 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 OR2D3Q8NGH3 330 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 AP1S3Q96PC3 154 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 TRAV10A0A0B4J240 114 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 TRAV12-3A0A0B4J271 114 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 C19orf71A6NCJ1 209 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 SNAI2O43623 268 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 ZNF324O75467 553 aaPredicted RBP3.77□□□□□ -1.81
LRIT3-201ENST00000327908 FAM3BP58499 235 aaPredicted RBP3.77□□□□□ -1.81
LRIT3-201ENST00000327908 ADIRFQ15847 76 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 FER1L6-AS1Q8NA97 138 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 C15orf53Q8NAA6 179 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 CSNK1G2-AS1Q8NCQ2 148 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 TSKUQ8WUA8 353 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 PCNPQ8WW12 178 aaKnown RBP3.77□□□□□ -1.81
LRIT3-201ENST00000327908 ISOC2Q96AB3 205 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 NAT8BQ9UHF3 227 aa3.77□□□□□ -1.81
LRIT3-201ENST00000327908 IGHV4-4A0A075B6R2 117 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 TRAV4A0A0B4J268 109 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 NXPH4O95158 308 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 CTRLP40313 264 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 DAD1P61803 113 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 C10orf91Q5T1B1 145 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 LINC01551Q86U37 167 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 SFRP2Q96HF1 295 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 NAGKQ9UJ70 344 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 PHLDA3Q9Y5J5 127 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 RELNP78509 3460 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 FOXA3P55318 350 aaPredicted RBP3.76□□□□□ -1.81
LRIT3-201ENST00000327908 LINC00612Q8N6U2 182 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 C9orf85Q96MD7 179 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 CITED4Q96RK1 184 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 TACC2O95359 2948 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 LINC01549A6NIU2 74 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 F6UB75 175 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 C3orf84H3BNL1 204 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 M0R036 132 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 CRXO43186 299 aaPredicted RBP3.76□□□□□ -1.81
LRIT3-201ENST00000327908 IGKV3-20P01619 116 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 MT-ND6P03923 174 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 ATP5G1P05496 136 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 G0S2P27469 103 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 DEFB135Q30KP9 77 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 IGFL4Q6B9Z1 124 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 C1orf158Q8N1D5 194 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 ZC2HC1AQ96GY0 325 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 DNAJC30Q96LL9 226 aa3.76□□□□□ -1.81
LRIT3-201ENST00000327908 TRAV34A0A0B4J273 112 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 IGHV3-16A0A0C4DH30 117 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 M0R2Z0 102 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 SPINK4O60575 86 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 RPL23P62829 140 aaKnown RBP3.75□□□□□ -1.81
LRIT3-201ENST00000327908 BTN1A1Q13410 526 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 DMRTA1Q5VZB9 504 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 Q8TAT8 98 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 RNASE8Q8TDE3 154 aaKnown RBP3.75□□□□□ -1.81
LRIT3-201ENST00000327908 PRADC1Q9BSG0 188 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 EDA2RQ9HAV5 297 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 TRBV10-1A0A0K0K1A3 114 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 GDF5OSQ5U4N7 250 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 WWC2-AS2Q96NR7 200 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 SSBP4Q9BWG4 385 aaPredicted RBP3.75□□□□□ -1.81
LRIT3-201ENST00000327908 CNFNQ9BYD5 112 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 LAMTOR2Q9Y2Q5 125 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 IGHV4-28A0A0C4DH34 117 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 PPBPP02775 128 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 TYMSP04818 313 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 SPANXN1Q5VSR9 72 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 OCC1Q8TAD7 63 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 RASL10AQ92737 203 aa3.75□□□□□ -1.81
LRIT3-201ENST00000327908 A0A1B0GUT8 65 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 BTF3P20290 206 aaKnown RBP3.74□□□□□ -1.81
LRIT3-201ENST00000327908 TIRAPP58753 221 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 PRR27Q6MZM9 219 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 Q8NAQ8 132 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 NUDT10Q8NFP7 164 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 C11orf45Q8TAV5 145 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 NUDT11Q96G61 164 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 C8orf49Q96NF6 230 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 SCRT2Q9NQ03 307 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 GSN-AS1Q9NRJ2 163 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 X6R8D5 127 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 TRAV8-1A0A0A6YYK1 113 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 M0R381 172 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 PHOX2AO14813 284 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 RS1O15537 224 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 RAB4BP61018 213 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 HIST2H2BDQ6DRA6 164 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 MRAP2Q96G30 205 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 JMJD1CQ15652 2540 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 TRAV26-1A0A087WT03 109 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 K7EP13 123 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 IGLV2-8P01709 118 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 IGLC6P0CF74 106 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 RHOHQ15669 191 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 GATD1Q8NB37 220 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 DPH3P1Q9H4G8 78 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 SMCO4Q9NRQ5 59 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 DKK2Q9UBU2 259 aa3.74□□□□□ -1.81
LRIT3-201ENST00000327908 TRGV2A0A075B6R0 118 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms