RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 SMIM27A0A1W2PRY6 76 aa10.11□□□□□ -0.79
LIN28A-202ENST00000326279 IFI27P40305 119 aaPredicted RBP10.11□□□□□ -0.79
LIN28A-202ENST00000326279 LEPP41159 167 aa10.11□□□□□ -0.79
LIN28A-202ENST00000326279 CD5LO43866 347 aa10.11□□□□□ -0.79
LIN28A-202ENST00000326279 FSTL3O95633 263 aa10.11□□□□□ -0.79
LIN28A-202ENST00000326279 C3orf79P0CE67 100 aa10.11□□□□□ -0.79
LIN28A-202ENST00000326279 RRN3P1Q2M238 152 aa10.11□□□□□ -0.79
LIN28A-202ENST00000326279 MSRB1Q9NZV6 116 aa10.11□□□□□ -0.79
LIN28A-202ENST00000326279 TRAV26-2A0A0B4J265 109 aa10.1□□□□□ -0.79
LIN28A-202ENST00000326279 FBLL1A6NHQ2 334 aaKnown RBP10.1□□□□□ -0.79
LIN28A-202ENST00000326279 A8MWP6 167 aa10.1□□□□□ -0.79
LIN28A-202ENST00000326279 IGHV3-53P01767 116 aa10.1□□□□□ -0.79
LIN28A-202ENST00000326279 ZNF25P17030 456 aaPredicted RBP10.1□□□□□ -0.79
LIN28A-202ENST00000326279 PAX2Q02962 417 aa10.1□□□□□ -0.79
LIN28A-202ENST00000326279 OR10J3Q5JRS4 329 aa10.1□□□□□ -0.79
LIN28A-202ENST00000326279 IGF2BP2-AS1Q96M15 143 aa10.1□□□□□ -0.79
LIN28A-202ENST00000326279 WI2-2373I1.2A0A1W2PRP0 233 aa10.1□□□□□ -0.79
LIN28A-202ENST00000326279 FAM231DQ6ZW35 169 aa10.1□□□□□ -0.79
LIN28A-202ENST00000326279 LOC102724200A0A096LPH7 203 aaPredicted RBP10.09□□□□□ -0.79
LIN28A-202ENST00000326279 IGHV7-4-1A0A0J9YVY3 117 aa10.09□□□□□ -0.79
LIN28A-202ENST00000326279 C1orf194Q5T5A4 169 aa10.09□□□□□ -0.79
LIN28A-202ENST00000326279 IGLC2P0DOY2 106 aa10.09□□□□□ -0.79
LIN28A-202ENST00000326279 PYGO2Q9BRQ0 406 aa10.09□□□□□ -0.79
LIN28A-202ENST00000326279 SCGB1D4Q6XE38 83 aa10.09□□□□□ -0.79
LIN28A-202ENST00000326279 GTSF1Q8WW33 167 aa10.09□□□□□ -0.79
LIN28A-202ENST00000326279 NF1P21359 2839 aa10.08□□□□□ -0.8
LIN28A-202ENST00000326279 IGKV3OR2-268A0A0C4DH90 116 aa10.08□□□□□ -0.8
LIN28A-202ENST00000326279 NUTF2P61970 127 aaKnown RBP10.08□□□□□ -0.8
LIN28A-202ENST00000326279 ZNF492Q9P255 531 aa10.08□□□□□ -0.8
LIN28A-202ENST00000326279 SMPXQ9UHP9 88 aa10.08□□□□□ -0.8
LIN28A-202ENST00000326279 NIPBLQ6KC79 2804 aaeCLIP10.08□□□□□ -0.8
LIN28A-202ENST00000326279 OR11H12B2RN74 326 aa10.08□□□□□ -0.8
LIN28A-202ENST00000326279 LGALS1P09382 135 aaKnown RBP10.08□□□□□ -0.8
LIN28A-202ENST00000326279 EDN2P20800 178 aa10.08□□□□□ -0.8
LIN28A-202ENST00000326279 CACNG7P62955 275 aa10.08□□□□□ -0.8
LIN28A-202ENST00000326279 DLX4Q92988 240 aaPredicted RBP10.08□□□□□ -0.8
LIN28A-202ENST00000326279 TRAV8-6A0A0B4J262 113 aa10.08□□□□□ -0.8
LIN28A-202ENST00000326279 MRAPQ8TCY5 172 aa10.08□□□□□ -0.8
LIN28A-202ENST00000326279 KIR2DL4Q99706 377 aa10.08□□□□□ -0.8
LIN28A-202ENST00000326279 IGLV2-8P01709 118 aa10.07□□□□□ -0.8
LIN28A-202ENST00000326279 ANXA2RQ3ZCQ2 193 aa10.07□□□□□ -0.8
LIN28A-202ENST00000326279 ZNF664Q8N3J9 261 aa10.07□□□□□ -0.8
LIN28A-202ENST00000326279 A0A1B0GW15 77 aa10.07□□□□□ -0.8
LIN28A-202ENST00000326279 GNRH2O43555 120 aa10.07□□□□□ -0.8
LIN28A-202ENST00000326279 PIFOQ8TCI5 191 aa10.07□□□□□ -0.8
LIN28A-202ENST00000326279 ALKBH7Q9BT30 221 aaPredicted RBP10.07□□□□□ -0.8
LIN28A-202ENST00000326279 CFHR3Q02985 330 aa10.07□□□□□ -0.8
LIN28A-202ENST00000326279 EBI3Q14213 229 aa10.07□□□□□ -0.8
LIN28A-202ENST00000326279 GTSCR1Q86UQ5 136 aa10.07□□□□□ -0.8
LIN28A-202ENST00000326279 Q6ZWC4 215 aa10.06□□□□□ -0.8
LIN28A-202ENST00000326279 UQCR10Q9UDW1 63 aa10.06□□□□□ -0.8
LIN28A-202ENST00000326279 ZMAT5Q9UDW3 170 aaKnown RBP10.06□□□□□ -0.8
LIN28A-202ENST00000326279 ERASQ7Z444 233 aa10.06□□□□□ -0.8
LIN28A-202ENST00000326279 hDV102S1A0JD36 115 aa10.06□□□□□ -0.8
LIN28A-202ENST00000326279 GATA1P15976 413 aaPredicted RBP10.06□□□□□ -0.8
LIN28A-202ENST00000326279 SCGB3A1Q96QR1 104 aa10.06□□□□□ -0.8
LIN28A-202ENST00000326279 TSSC4Q9Y5U2 329 aaPredicted RBP10.06□□□□□ -0.8
LIN28A-202ENST00000326279 TRGV2A0A075B6R0 118 aa10.05□□□□□ -0.8
LIN28A-202ENST00000326279 DUSP14O95147 198 aaKnown RBP10.05□□□□□ -0.8
LIN28A-202ENST00000326279 LINC01006Q8NI28 216 aa10.05□□□□□ -0.8
LIN28A-202ENST00000326279 TMEM190Q8WZ59 177 aa10.05□□□□□ -0.8
LIN28A-202ENST00000326279 HRNRQ86YZ3 2850 aaPredicted RBP10.05□□□□□ -0.8
LIN28A-202ENST00000326279 A0A1B0GV90 55 aa10.05□□□□□ -0.8
LIN28A-202ENST00000326279 ZNF124Q15973 351 aa10.05□□□□□ -0.8
LIN28A-202ENST00000326279 TMEM61Q8N0U2 210 aa10.05□□□□□ -0.8
LIN28A-202ENST00000326279 Q8N6K4 173 aa10.05□□□□□ -0.8
LIN28A-202ENST00000326279 SLC25A34Q6PIV7 304 aa10.04□□□□□ -0.8
LIN28A-202ENST00000326279 SMIM12Q96EX1 92 aa10.04□□□□□ -0.8
LIN28A-202ENST00000326279 MS4A6AQ9H2W1 248 aa10.04□□□□□ -0.8
LIN28A-202ENST00000326279 HBDP02042 147 aa10.04□□□□□ -0.8
LIN28A-202ENST00000326279 RASL11AQ6T310 242 aa10.04□□□□□ -0.8
LIN28A-202ENST00000326279 NEGR1Q7Z3B1 354 aa10.04□□□□□ -0.8
LIN28A-202ENST00000326279 CD300EQ496F6 205 aaPredicted RBP10.04□□□□□ -0.8
LIN28A-202ENST00000326279 MRPL51Q4U2R6 128 aaKnown RBP10.04□□□□□ -0.8
LIN28A-202ENST00000326279 FAM104BQ5XKR9 115 aa10.04□□□□□ -0.8
LIN28A-202ENST00000326279 ZNF80P51504 273 aaPredicted RBP10.04□□□□□ -0.8
LIN28A-202ENST00000326279 Q0VG73 95 aa10.04□□□□□ -0.8
LIN28A-202ENST00000326279 MRGPRG-AS1Q2M3A8 158 aa10.04□□□□□ -0.8
LIN28A-202ENST00000326279 ZNF876PQ49A33 203 aa10.04□□□□□ -0.8
LIN28A-202ENST00000326279 IFI27L1Q96BM0 104 aa10.04□□□□□ -0.8
LIN28A-202ENST00000326279 CLPSL1A2RUU4 121 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 IGF1P05019 195 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 DEFB130BP0DP73 79 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 DEFB130AP0DP74 79 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 CT83Q5H943 113 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 GFRA4Q9GZZ7 299 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 KLF12Q9Y4X4 402 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 TNFRSF18Q9Y5U5 241 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 AGRNO00468 2067 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 TMEM97Q5BJF2 176 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 OR9G4Q8NGQ1 327 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 RAB37Q96AX2 223 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 ZNF702PQ9H963 129 aa10.03□□□□□ -0.8
LIN28A-202ENST00000326279 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
LIN28A-202ENST00000326279 NPYP01303 97 aa10.02□□□□□ -0.8
LIN28A-202ENST00000326279 C2orf70A6NJV1 201 aa10.02□□□□□ -0.81
LIN28A-202ENST00000326279 TNFRSF6BO95407 300 aa10.02□□□□□ -0.81
LIN28A-202ENST00000326279 IGHG4P01861 327 aa10.02□□□□□ -0.81
LIN28A-202ENST00000326279 PPBPP02775 128 aa10.02□□□□□ -0.81
LIN28A-202ENST00000326279 TMEM170BQ5T4T1 132 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms