RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 GP9P14770 177 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 DPH3P1Q9H4G8 78 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 ERG28Q9UKR5 140 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 TSPAN13O95857 204 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 RNASE1P07998 156 aaKnown RBP12.94□□□□□ -0.34
SFXN1-201ENST00000321442 SLC25A16P16260 332 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 TMEM95Q3KNT9 176 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 NPFFR1Q9GZQ6 430 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 TEX48A0A1B0GUV7 120 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 SHISA9B4DS77 424 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 FCN3O75636 299 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 TMEM14CQ9P0S9 112 aa12.94□□□□□ -0.34
SFXN1-201ENST00000321442 C2orf66Q6UXQ4 117 aa12.93□□□□□ -0.34
SFXN1-201ENST00000321442 TRAV41A0A0B4J266 112 aa12.93□□□□□ -0.34
SFXN1-201ENST00000321442 LINC00311Q8N616 119 aa12.93□□□□□ -0.34
SFXN1-201ENST00000321442 LINC01559Q495D7 138 aa12.93□□□□□ -0.34
SFXN1-201ENST00000321442 LINC01545Q5VT33 79 aa12.93□□□□□ -0.34
SFXN1-201ENST00000321442 SH2D6Q7Z4S9 175 aa12.93□□□□□ -0.34
SFXN1-201ENST00000321442 PAX1P15863 534 aa12.93□□□□□ -0.34
SFXN1-201ENST00000321442 NPFFO15130 113 aa12.92□□□□□ -0.34
SFXN1-201ENST00000321442 SCRT2Q9NQ03 307 aa12.92□□□□□ -0.34
SFXN1-201ENST00000321442 TOMM7Q9P0U1 55 aa12.92□□□□□ -0.34
SFXN1-201ENST00000321442 AZU1P20160 251 aa12.92□□□□□ -0.34
SFXN1-201ENST00000321442 ADORA2A-AS1P86434 159 aa12.92□□□□□ -0.34
SFXN1-201ENST00000321442 ZNF876PQ49A33 203 aa12.92□□□□□ -0.34
SFXN1-201ENST00000321442 SP5Q6BEB4 398 aaPredicted RBP12.92□□□□□ -0.34
SFXN1-201ENST00000321442 RNF223E7ERA6 249 aa12.91□□□□□ -0.34
SFXN1-201ENST00000321442 GAGE2BQ13066 116 aa12.91□□□□□ -0.34
SFXN1-201ENST00000321442 GAGE2EQ4V326 116 aa12.91□□□□□ -0.34
SFXN1-201ENST00000321442 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
SFXN1-201ENST00000321442 GAGE2DQ9UEU5 116 aa12.91□□□□□ -0.34
SFXN1-201ENST00000321442 ATG2AQ2TAZ0 1938 aa12.91□□□□□ -0.34
SFXN1-201ENST00000321442 NCKAP5O14513 1909 aa12.91□□□□□ -0.34
SFXN1-201ENST00000321442 ATP6V0E1O15342 81 aa12.91□□□□□ -0.34
SFXN1-201ENST00000321442 Q8N8P6 123 aa12.91□□□□□ -0.34
SFXN1-201ENST00000321442 C9JAW5 83 aa12.9□□□□□ -0.34
SFXN1-201ENST00000321442 CD28P10747 220 aa12.9□□□□□ -0.34
SFXN1-201ENST00000321442 Q71RC1 249 aaPredicted RBP12.9□□□□□ -0.34
SFXN1-201ENST00000321442 H3BUX3 64 aa12.9□□□□□ -0.34
SFXN1-201ENST00000321442 IGF2-ASQ6U949 168 aa12.9□□□□□ -0.34
SFXN1-201ENST00000321442 OR13C6PQ8NH95 151 aa12.9□□□□□ -0.34
SFXN1-201ENST00000321442 AKAP13Q12802 2813 aa12.9□□□□□ -0.34
SFXN1-201ENST00000321442 GAGE12HA6NDE8 117 aa12.9□□□□□ -0.34
SFXN1-201ENST00000321442 OVOL1O14753 267 aa12.9□□□□□ -0.34
SFXN1-201ENST00000321442 SAA4P35542 130 aa12.9□□□□□ -0.34
SFXN1-201ENST00000321442 LOXL1Q08397 574 aaPredicted RBP12.9□□□□□ -0.34
SFXN1-201ENST00000321442 TRBV25-1A0A075B6N4 114 aa12.89□□□□□ -0.35
SFXN1-201ENST00000321442 TMEM238C9JI98 176 aa12.89□□□□□ -0.35
SFXN1-201ENST00000321442 PRADC1Q9BSG0 188 aa12.89□□□□□ -0.35
SFXN1-201ENST00000321442 C9orf139Q6ZV77 190 aa12.89□□□□□ -0.35
SFXN1-201ENST00000321442 FXYD2P54710 66 aa12.89□□□□□ -0.35
SFXN1-201ENST00000321442 DYNAPQ8N1N2 210 aa12.89□□□□□ -0.35
SFXN1-201ENST00000321442 C10orf126Q8N4M7 172 aa12.89□□□□□ -0.35
SFXN1-201ENST00000321442 ITLN2Q8WWU7 325 aaPredicted RBP12.89□□□□□ -0.35
SFXN1-201ENST00000321442 TMEM262E9PQX1 116 aa12.88□□□□□ -0.35
SFXN1-201ENST00000321442 UBE2L6O14933 153 aa12.88□□□□□ -0.35
SFXN1-201ENST00000321442 DNAL4O96015 105 aa12.88□□□□□ -0.35
SFXN1-201ENST00000321442 SCGB1A1P11684 91 aa12.88□□□□□ -0.35
SFXN1-201ENST00000321442 YAE1D1Q9NRH1 226 aa12.88□□□□□ -0.35
SFXN1-201ENST00000321442 MUC3AQ02505 3323 aa12.88□□□□□ -0.35
SFXN1-201ENST00000321442 CTRLP40313 264 aa12.88□□□□□ -0.35
SFXN1-201ENST00000321442 SPXQ9BT56 116 aa12.88□□□□□ -0.35
SFXN1-201ENST00000321442 TP53TG1Q9Y2A0 90 aa12.88□□□□□ -0.35
SFXN1-201ENST00000321442 LINC00310P59036 64 aa12.87□□□□□ -0.35
SFXN1-201ENST00000321442 CEND1Q8N111 149 aa12.87□□□□□ -0.35
SFXN1-201ENST00000321442 FRYQ5TBA9 3013 aa12.87□□□□□ -0.35
SFXN1-201ENST00000321442 C3orf36Q3SXR2 165 aa12.87□□□□□ -0.35
SFXN1-201ENST00000321442 ZFAND6Q6FIF0 208 aa12.87□□□□□ -0.35
SFXN1-201ENST00000321442 KLF12Q9Y4X4 402 aa12.87□□□□□ -0.35
SFXN1-201ENST00000321442 VCYO14598 125 aa12.87□□□□□ -0.35
SFXN1-201ENST00000321442 LINC00477Q96M19 166 aa12.87□□□□□ -0.35
SFXN1-201ENST00000321442 SRSF8Q9BRL6 282 aaKnown RBP12.87□□□□□ -0.35
SFXN1-201ENST00000321442 F8VRH5 84 aa12.86□□□□□ -0.35
SFXN1-201ENST00000321442 K7EIM0 57 aa12.86□□□□□ -0.35
SFXN1-201ENST00000321442 C12orf74Q32Q52 190 aa12.86□□□□□ -0.35
SFXN1-201ENST00000321442 OVOL3O00110 214 aa12.86□□□□□ -0.35
SFXN1-201ENST00000321442 C8orf86Q6ZUL3 223 aa12.86□□□□□ -0.35
SFXN1-201ENST00000321442 LINC01587Q99440 93 aa12.86□□□□□ -0.35
SFXN1-201ENST00000321442 RHPN1-AS1Q9BWJ2 59 aa12.86□□□□□ -0.35
SFXN1-201ENST00000321442 IGKV1D-37A0A075B6S9 117 aa12.86□□□□□ -0.35
SFXN1-201ENST00000321442 EIF4EBP1Q13541 118 aaPredicted RBP12.86□□□□□ -0.35
SFXN1-201ENST00000321442 AGPAT4-IT1Q9H0P7 198 aa12.86□□□□□ -0.35
SFXN1-201ENST00000321442 WFDC2Q14508 124 aa12.86□□□□□ -0.35
SFXN1-201ENST00000321442 MINOS1Q5TGZ0 78 aa12.86□□□□□ -0.35
SFXN1-201ENST00000321442 MINOS1-NBL1R4GNA1 71 aa12.86□□□□□ -0.35
SFXN1-201ENST00000321442 NBEAQ8NFP9 2946 aa12.85□□□□□ -0.35
SFXN1-201ENST00000321442 SPATA12Q7Z6I5 190 aa12.85□□□□□ -0.35
SFXN1-201ENST00000321442 ANKRD17O75179 2603 aaKnown RBP12.85□□□□□ -0.35
SFXN1-201ENST00000321442 F8W1H4 67 aa12.85□□□□□ -0.35
SFXN1-201ENST00000321442 HLA-DRB4P13762 266 aa12.85□□□□□ -0.35
SFXN1-201ENST00000321442 FOXE3Q13461 319 aa12.85□□□□□ -0.35
SFXN1-201ENST00000321442 SMIM2Q9BVW6 85 aa12.85□□□□□ -0.35
SFXN1-201ENST00000321442 HLA-DRB4X5D2U9 266 aa12.85□□□□□ -0.35
SFXN1-201ENST00000321442 TNRC18O15417 2968 aaPredicted RBP12.85□□□□□ -0.35
SFXN1-201ENST00000321442 MYMXA0A1B0GTQ4 84 aa12.85□□□□□ -0.35
SFXN1-201ENST00000321442 I3L2K1 104 aa12.84□□□□□ -0.35
SFXN1-201ENST00000321442 M0R1W7 72 aa12.84□□□□□ -0.35
SFXN1-201ENST00000321442 RRN3P1Q2M238 152 aa12.84□□□□□ -0.35
SFXN1-201ENST00000321442 CGB3P0DN86 165 aa12.84□□□□□ -0.35
SFXN1-201ENST00000321442 CGB7P0DN87 165 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms