RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 D6R8Y8 96 aa12.77□□□□□ -0.37
SSR4-201ENST00000320857 J3KRW8 73 aa12.77□□□□□ -0.37
SSR4-201ENST00000320857 OR5AL1P0C617 328 aa12.77□□□□□ -0.37
SSR4-201ENST00000320857 SLURP1P55000 103 aa12.77□□□□□ -0.37
SSR4-201ENST00000320857 TCTEX1D4Q5JR98 221 aa12.77□□□□□ -0.37
SSR4-201ENST00000320857 PRELID3AQ96N28 172 aa12.77□□□□□ -0.37
SSR4-201ENST00000320857 SONP18583 2426 aaKnown RBP12.76□□□□□ -0.37
SSR4-201ENST00000320857 INAFM1C9JVW0 142 aa12.76□□□□□ -0.37
SSR4-201ENST00000320857 SNAI2O43623 268 aa12.76□□□□□ -0.37
SSR4-201ENST00000320857 RNASE4P34096 147 aaKnown RBP12.76□□□□□ -0.37
SSR4-201ENST00000320857 DEFB136Q30KP8 78 aa12.76□□□□□ -0.37
SSR4-201ENST00000320857 PSMG4Q5JS54 123 aa12.76□□□□□ -0.37
SSR4-201ENST00000320857 ZNF664Q8N3J9 261 aa12.76□□□□□ -0.37
SSR4-201ENST00000320857 OR11H1Q8NG94 326 aa12.76□□□□□ -0.37
SSR4-201ENST00000320857 PRO1933Q9H354 126 aa12.76□□□□□ -0.37
SSR4-201ENST00000320857 ZNF688P0C7X2 276 aa12.75□□□□□ -0.37
SSR4-201ENST00000320857 CKS2P33552 79 aa12.75□□□□□ -0.37
SSR4-201ENST00000320857 SMIM15Q7Z3B0 74 aa12.75□□□□□ -0.37
SSR4-201ENST00000320857 KLHL30-AS1Q8NEE0 82 aa12.75□□□□□ -0.37
SSR4-201ENST00000320857 ODF3Q96PU9 254 aa12.75□□□□□ -0.37
SSR4-201ENST00000320857 MSRB1Q9NZV6 116 aa12.75□□□□□ -0.37
SSR4-201ENST00000320857 RNF114Q9Y508 228 aa12.75□□□□□ -0.37
SSR4-201ENST00000320857 ANK3Q12955 4377 aaKnown RBP12.74□□□□□ -0.37
SSR4-201ENST00000320857 IGHV4-4A0A075B6R2 117 aa12.74□□□□□ -0.37
SSR4-201ENST00000320857 PPBPP02775 128 aa12.74□□□□□ -0.37
SSR4-201ENST00000320857 CSN3P07498 182 aa12.74□□□□□ -0.37
SSR4-201ENST00000320857 C3orf79P0CE67 100 aa12.74□□□□□ -0.37
SSR4-201ENST00000320857 LEPP41159 167 aa12.74□□□□□ -0.37
SSR4-201ENST00000320857 Q6ZQT7 251 aa12.74□□□□□ -0.37
SSR4-201ENST00000320857 FA2HQ7L5A8 372 aa12.74□□□□□ -0.37
SSR4-201ENST00000320857 PRSS3P2Q8NHM4 247 aa12.74□□□□□ -0.37
SSR4-201ENST00000320857 IGHV1-24A0A0C4DH33 117 aa12.73□□□□□ -0.37
SSR4-201ENST00000320857 KLLNB2CW77 178 aa12.73□□□□□ -0.37
SSR4-201ENST00000320857 RNASE1P07998 156 aaKnown RBP12.73□□□□□ -0.37
SSR4-201ENST00000320857 ASIPP42127 132 aa12.73□□□□□ -0.37
SSR4-201ENST00000320857 EBLN2Q6P2I7 272 aa12.73□□□□□ -0.37
SSR4-201ENST00000320857 TEX43Q6ZNM6 134 aa12.73□□□□□ -0.37
SSR4-201ENST00000320857 A0A0J9YX75 114 aa12.73□□□□□ -0.37
SSR4-201ENST00000320857 DUSP14O95147 198 aaKnown RBP12.73□□□□□ -0.37
SSR4-201ENST00000320857 MED14OSP0DP75 135 aa12.73□□□□□ -0.37
SSR4-201ENST00000320857 SPANXN1Q5VSR9 72 aa12.73□□□□□ -0.37
SSR4-201ENST00000320857 OR9G4Q8NGQ1 327 aa12.73□□□□□ -0.37
SSR4-201ENST00000320857 OR10AG1Q8NH19 301 aa12.73□□□□□ -0.37
SSR4-201ENST00000320857 RNF185Q96GF1 192 aa12.73□□□□□ -0.37
SSR4-201ENST00000320857 H3BVH4 76 aa12.72□□□□□ -0.37
SSR4-201ENST00000320857 S100A4P26447 101 aaKnown RBP12.72□□□□□ -0.37
SSR4-201ENST00000320857 ANXA2RQ3ZCQ2 193 aa12.72□□□□□ -0.37
SSR4-201ENST00000320857 ADAMTSL5Q6ZMM2 481 aa12.72□□□□□ -0.37
SSR4-201ENST00000320857 ZNF418Q8TF45 676 aaPredicted RBP12.72□□□□□ -0.37
SSR4-201ENST00000320857 AP5S1Q9NUS5 200 aa12.72□□□□□ -0.37
SSR4-201ENST00000320857 LAMTOR2Q9Y2Q5 125 aa12.72□□□□□ -0.37
SSR4-201ENST00000320857 TRAV2A0A0B4J234 112 aa12.71□□□□□ -0.37
SSR4-201ENST00000320857 BTF3P20290 206 aaKnown RBP12.71□□□□□ -0.37
SSR4-201ENST00000320857 Q8N976 141 aa12.71□□□□□ -0.37
SSR4-201ENST00000320857 C16orf95Q9H693 158 aa12.71□□□□□ -0.37
SSR4-201ENST00000320857 LEPROTL1O95214 131 aa12.7□□□□□ -0.38
SSR4-201ENST00000320857 DDTP30046 118 aa12.7□□□□□ -0.38
SSR4-201ENST00000320857 PMCHL1Q16048 86 aa12.7□□□□□ -0.38
SSR4-201ENST00000320857 FOXI2Q6ZQN5 318 aa12.7□□□□□ -0.38
SSR4-201ENST00000320857 TSPOP30536 169 aa12.7□□□□□ -0.38
SSR4-201ENST00000320857 HILS1P60008 231 aa12.7□□□□□ -0.38
SSR4-201ENST00000320857 KIR3DS1Q14943 382 aa12.7□□□□□ -0.38
SSR4-201ENST00000320857 VAMP8Q9BV40 100 aa12.7□□□□□ -0.38
SSR4-201ENST00000320857 SIGLEC8Q9NYZ4 499 aa12.7□□□□□ -0.38
SSR4-201ENST00000320857 HIVEP2P31629 2446 aa12.69□□□□□ -0.38
SSR4-201ENST00000320857 TEP1Q99973 2627 aaKnown RBP12.69□□□□□ -0.38
SSR4-201ENST00000320857 LOC389332A0A1B0GUA5 103 aa12.69□□□□□ -0.38
SSR4-201ENST00000320857 C7orf71A4D174 169 aa12.69□□□□□ -0.38
SSR4-201ENST00000320857 SMKR1H3BMG3 65 aa12.69□□□□□ -0.38
SSR4-201ENST00000320857 TCF21O43680 179 aa12.69□□□□□ -0.38
SSR4-201ENST00000320857 NPYP01303 97 aa12.69□□□□□ -0.38
SSR4-201ENST00000320857 IFI27P40305 119 aaPredicted RBP12.69□□□□□ -0.38
SSR4-201ENST00000320857 DLX4Q92988 240 aaPredicted RBP12.69□□□□□ -0.38
SSR4-201ENST00000320857 DUX3Q96PT4 197 aa12.69□□□□□ -0.38
SSR4-201ENST00000320857 HSPB8Q9UJY1 196 aa12.69□□□□□ -0.38
SSR4-201ENST00000320857 TIMM8BQ9Y5J9 83 aaPredicted RBP12.69□□□□□ -0.38
SSR4-201ENST00000320857 KIR2DL5BA0A0G2JN68 375 aa12.68□□□□□ -0.38
SSR4-201ENST00000320857 KIR2DL5BA0A0G2JPC4 375 aa12.68□□□□□ -0.38
SSR4-201ENST00000320857 NCR2O95944 276 aa12.68□□□□□ -0.38
SSR4-201ENST00000320857 FAM159AQ6UWV7 190 aa12.68□□□□□ -0.38
SSR4-201ENST00000320857 KIR2DL5AQ8N109 375 aa12.68□□□□□ -0.38
SSR4-201ENST00000320857 DYNLRB2Q8TF09 96 aa12.68□□□□□ -0.38
SSR4-201ENST00000320857 TMEM70Q9BUB7 260 aa12.68□□□□□ -0.38
SSR4-201ENST00000320857 MAP1LC3AQ9H492 121 aa12.68□□□□□ -0.38
SSR4-201ENST00000320857 PHLDA3Q9Y5J5 127 aa12.68□□□□□ -0.38
SSR4-201ENST00000320857 EVI2AP22794 236 aa12.67□□□□□ -0.38
SSR4-201ENST00000320857 DEFA6Q01524 100 aa12.67□□□□□ -0.38
SSR4-201ENST00000320857 SCRT2Q9NQ03 307 aa12.67□□□□□ -0.38
SSR4-201ENST00000320857 GNRH2O43555 120 aa12.66□□□□□ -0.38
SSR4-201ENST00000320857 CD28P10747 220 aa12.66□□□□□ -0.38
SSR4-201ENST00000320857 LINC01006Q8NI28 216 aa12.66□□□□□ -0.38
SSR4-201ENST00000320857 RAX2Q96IS3 184 aa12.66□□□□□ -0.38
SSR4-201ENST00000320857 C20orf144Q9BQM9 153 aa12.66□□□□□ -0.38
SSR4-201ENST00000320857 MAP1LC3CQ9BXW4 147 aa12.66□□□□□ -0.38
SSR4-201ENST00000320857 TRAV12-3A0A0B4J271 114 aa12.65□□□□□ -0.38
SSR4-201ENST00000320857 C20orf202A1L168 122 aa12.65□□□□□ -0.38
SSR4-201ENST00000320857 TNFRSF6BO95407 300 aa12.65□□□□□ -0.38
SSR4-201ENST00000320857 CDKN1BP46527 198 aa12.65□□□□□ -0.38
SSR4-201ENST00000320857 JMJD8Q96S16 334 aa12.65□□□□□ -0.38
SSR4-201ENST00000320857 TSSC4Q9Y5U2 329 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1040.3 ms