RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 OR10J3Q5JRS4 329 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 TMEM170BQ5T4T1 132 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 HIST2H2BDQ6DRA6 164 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 Q6ZS46 218 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 A0A087WWL8 130 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 M0R143 59 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 MEIG1Q5JSS6 88 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 C14orf144Q96I85 54 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 FRYQ5TBA9 3013 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 TYMSP04818 313 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 GCSHP23434 173 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 FOXE3Q13461 319 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 RASL11AQ6T310 242 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 C1orf159Q96HA4 380 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 DDTP30046 118 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 CACNG7P62955 275 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 PYY3Q5JQD4 70 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 LRRC75A-AS1Q8N1F1 130 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 Q8N6K4 173 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 DMXL2Q8TDJ6 3036 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 SMIM27A0A1W2PRY6 76 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 SNAI2O43623 268 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 EGR2P11161 476 aaPredicted RBP7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 PLA2G2AP14555 144 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 CHCHD5Q9BSY4 110 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 TMEM160Q9NX00 188 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 MAST4O15021 2626 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 A0A087WX48 190 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 K7ERU9 68 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 PPP1R17O96001 155 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 IGLC2P0DOY2 106 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 ANXA2RQ3ZCQ2 193 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 CT83Q5H943 113 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 C1QTNF4Q9BXJ3 329 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 GFRA4Q9GZZ7 299 aa7.17□□□□□ -1.26
TMEM39A-201ENST00000319172 TRGV11A0A075B6L2 103 aa7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 LOC102724200A0A096LPH7 203 aaPredicted RBP7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 H7C2G1 150 aa7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 SCGB3A1Q96QR1 104 aa7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 FOXC2Q99958 501 aa7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 FRMD6-AS1P0C7T7 363 aa7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 IGF2BP2-AS1Q96M15 143 aa7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 RCHY1Q96PM5 261 aa7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 MCRIP2Q9BUT9 160 aaKnown RBP7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 MS4A6AQ9H2W1 248 aa7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 A8MWP6 167 aa7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 CCL24O00175 119 aa7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 JOSD1Q15040 202 aaPredicted RBP7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 ATRQ13535 2644 aa7.16□□□□□ -1.26
TMEM39A-201ENST00000319172 IGKV3D-20A0A0C4DH25 116 aa7.15□□□□□ -1.26
TMEM39A-201ENST00000319172 UBE2DNLQ8IWF7 75 aa7.15□□□□□ -1.26
TMEM39A-201ENST00000319172 C18orf32Q8TCD1 76 aa7.15□□□□□ -1.26
TMEM39A-201ENST00000319172 DMXL1Q9Y485 3027 aa7.15□□□□□ -1.26
TMEM39A-201ENST00000319172 DNAJC9-AS1A6NH13 148 aa7.15□□□□□ -1.26
TMEM39A-201ENST00000319172 HBDP02042 147 aa7.15□□□□□ -1.26
TMEM39A-201ENST00000319172 OR4C5Q8NGB2 326 aa7.15□□□□□ -1.26
TMEM39A-201ENST00000319172 ST20Q9HBF5 79 aa7.15□□□□□ -1.26
TMEM39A-201ENST00000319172 FAM231BA6NCW3 169 aa7.15□□□□□ -1.27
TMEM39A-201ENST00000319172 IGF1P05019 195 aa7.15□□□□□ -1.27
TMEM39A-201ENST00000319172 ZNF25P17030 456 aaPredicted RBP7.15□□□□□ -1.27
TMEM39A-201ENST00000319172 CFAP46Q8IYW2 2715 aa7.15□□□□□ -1.27
TMEM39A-201ENST00000319172 USP24Q9UPU5 2620 aa7.15□□□□□ -1.27
TMEM39A-201ENST00000319172 IFI27P40305 119 aaPredicted RBP7.15□□□□□ -1.27
TMEM39A-201ENST00000319172 HINT1P49773 126 aaPredicted RBP7.15□□□□□ -1.27
TMEM39A-201ENST00000319172 NXT2Q9NPJ8 142 aaKnown RBP7.15□□□□□ -1.27
TMEM39A-201ENST00000319172 F8P00451 2351 aa7.14□□□□□ -1.27
TMEM39A-201ENST00000319172 ZNF876PQ49A33 203 aa7.14□□□□□ -1.27
TMEM39A-201ENST00000319172 DMRTA1Q5VZB9 504 aa7.14□□□□□ -1.27
TMEM39A-201ENST00000319172 PRSS57Q6UWY2 283 aa7.14□□□□□ -1.27
TMEM39A-201ENST00000319172 Q6YL49 198 aa7.14□□□□□ -1.27
TMEM39A-201ENST00000319172 OR9G4Q8NGQ1 327 aa7.14□□□□□ -1.27
TMEM39A-201ENST00000319172 DPH3P1Q9H4G8 78 aa7.14□□□□□ -1.27
TMEM39A-201ENST00000319172 UQCR10Q9UDW1 63 aa7.14□□□□□ -1.27
TMEM39A-201ENST00000319172 LGALS3P17931 250 aaKnown RBP7.14□□□□□ -1.27
TMEM39A-201ENST00000319172 WIPF2Q8TF74 440 aaPredicted RBP7.14□□□□□ -1.27
TMEM39A-201ENST00000319172 COL27A1Q8IZC6 1860 aaPredicted RBP7.14□□□□□ -1.27
TMEM39A-201ENST00000319172 TRAV8-6A0A0B4J262 113 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 TRAV26-2A0A0B4J265 109 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 FAM104BQ5XKR9 115 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 APRG1Q8IVJ8 170 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 MRAPQ8TCY5 172 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 A4D1N5 150 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 GNRH2O43555 120 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 INSP01308 110 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 IGHG4P01861 327 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 C3orf79P0CE67 100 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 CIRBPQ14011 172 aaKnown RBP7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 SLC25A34Q6PIV7 304 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 CHCHD1Q96BP2 118 aaKnown RBP7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 PYGO2Q9BRQ0 406 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 ATP5LO75964 103 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 KLF12Q9Y4X4 402 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 TSSC4Q9Y5U2 329 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 C2orf70A6NJV1 201 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 VWC2LB2RUY7 222 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 SRSF2Q01130 221 aaKnown RBP7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 SRSF1Q07955 248 aaKnown RBP eCLIP7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 IFI27L1Q96BM0 104 aa7.13□□□□□ -1.27
TMEM39A-201ENST00000319172 ALKBH7Q9BT30 221 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms