RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 IGLL5B9A064 214 aa13.23□□□□□ -0.29
SCAMP4-201ENST00000316097 NDUFA3O95167 84 aa13.23□□□□□ -0.29
SCAMP4-201ENST00000316097 IGHV4-38-2P0DP08 117 aa13.23□□□□□ -0.29
SCAMP4-201ENST00000316097 ZNF479Q96JC4 524 aa13.23□□□□□ -0.29
SCAMP4-201ENST00000316097 NAV2Q8IVL1 2488 aa13.22□□□□□ -0.29
SCAMP4-201ENST00000316097 LINC01546A6NGU7 62 aa13.22□□□□□ -0.29
SCAMP4-201ENST00000316097 IGHV3-23P01764 117 aa13.22□□□□□ -0.29
SCAMP4-201ENST00000316097 CD300EQ496F6 205 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-201ENST00000316097 DOPEY2Q9Y3R5 2298 aa13.22□□□□□ -0.29
SCAMP4-201ENST00000316097 H3BMG7 143 aa13.22□□□□□ -0.29
SCAMP4-201ENST00000316097 NDUFS8O00217 210 aa13.22□□□□□ -0.29
SCAMP4-201ENST00000316097 ATP5LO75964 103 aa13.22□□□□□ -0.29
SCAMP4-201ENST00000316097 FOXI2Q6ZQN5 318 aa13.22□□□□□ -0.29
SCAMP4-201ENST00000316097 SH2D6Q7Z4S9 175 aa13.22□□□□□ -0.29
SCAMP4-201ENST00000316097 MAPKAPK5-AS1Q8N8E1 139 aa13.22□□□□□ -0.29
SCAMP4-201ENST00000316097 APCP25054 2843 aa13.21□□□□□ -0.29
SCAMP4-201ENST00000316097 F8W1H4 67 aa13.21□□□□□ -0.29
SCAMP4-201ENST00000316097 AVPP01185 164 aa13.21□□□□□ -0.29
SCAMP4-201ENST00000316097 RPL7P18124 248 aaKnown RBP13.21□□□□□ -0.29
SCAMP4-201ENST00000316097 TMEM219Q86XT9 240 aa13.21□□□□□ -0.29
SCAMP4-201ENST00000316097 Q8N6K4 173 aa13.21□□□□□ -0.29
SCAMP4-201ENST00000316097 ARPC1AQ92747 370 aa13.21□□□□□ -0.29
SCAMP4-201ENST00000316097 MRPL35Q9NZE8 188 aaKnown RBP13.21□□□□□ -0.29
SCAMP4-201ENST00000316097 MFAP4P55083 255 aa13.21□□□□□ -0.3
SCAMP4-201ENST00000316097 ETDBQ3ZM63 59 aa13.21□□□□□ -0.3
SCAMP4-201ENST00000316097 AMTNQ6UX39 209 aa13.21□□□□□ -0.3
SCAMP4-201ENST00000316097 MTURNQ8N3F0 131 aa13.21□□□□□ -0.3
SCAMP4-201ENST00000316097 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.21□□□□□ -0.36e-10■■■□□ 18.4
SCAMP4-201ENST00000316097 SCGB1A1P11684 91 aa13.2□□□□□ -0.3
SCAMP4-201ENST00000316097 SMPXQ9UHP9 88 aa13.2□□□□□ -0.3
SCAMP4-201ENST00000316097 LINC01548A6NM66 108 aa13.2□□□□□ -0.3
SCAMP4-201ENST00000316097 J3QR89 54 aa13.2□□□□□ -0.3
SCAMP4-201ENST00000316097 CNFNQ9BYD5 112 aa13.2□□□□□ -0.3
SCAMP4-201ENST00000316097 HIF1ANQ9NWT6 349 aa13.2□□□□□ -0.3
SCAMP4-201ENST00000316097 IGHV3OR16-8A0A075B7F1 116 aa13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 F8W735 103 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 IGHG4P01861 327 aa13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 ERCC8Q13216 396 aa13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 C12orf74Q32Q52 190 aa13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 FANCD2OSQ96PS1 177 aa13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 ZNF469Q96JG9 3925 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 CSPG4Q6UVK1 2322 aa13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 FABP5P3A8MUU1 101 aa13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 MSMBP08118 114 aa13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 Q8N8P6 123 aa13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 Q8N9W7 124 aa13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 SMAD5-AS1Q9Y6J3 95 aa13.19□□□□□ -0.3
SCAMP4-201ENST00000316097 EBI3Q14213 229 aa13.18□□□□□ -0.3
SCAMP4-201ENST00000316097 SPAG8Q99932 426 aaPredicted RBP13.18□□□□□ -0.3
SCAMP4-201ENST00000316097 OOSP1A8MZH6 123 aa13.18□□□□□ -0.3
SCAMP4-201ENST00000316097 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.18□□□□□ -0.3
SCAMP4-201ENST00000316097 HIST1H4GQ99525 98 aa13.18□□□□□ -0.3
SCAMP4-201ENST00000316097 HELZ2Q9BYK8 2649 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-201ENST00000316097 IGLV11-55A0A075B6I3 123 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 IGHV1-69DA0A0B4J2H0 117 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 IGHV1-69P01742 117 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 LINC01559Q495D7 138 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 C21orf62Q9NYP8 219 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 IGLV2-18A0A075B6J9 118 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 IGHV7-81A0A0B4J1V7 117 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 TRGV3P03979 118 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 HLA-DRB4P13762 266 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 TTC9CQ8N5M4 171 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 MYOZ3Q8TDC0 251 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 PSMG3-AS1Q96PY0 264 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 HLA-DRB4X5D2U9 266 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 AGRNO00468 2067 aa13.17□□□□□ -0.3
SCAMP4-201ENST00000316097 IGHV3-35A0A0C4DH35 117 aa13.16□□□□□ -0.3
SCAMP4-201ENST00000316097 RNF223E7ERA6 249 aa13.16□□□□□ -0.3
SCAMP4-201ENST00000316097 SRSF2Q01130 221 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-201ENST00000316097 TRAV26-2A0A0B4J265 109 aa13.16□□□□□ -0.3
SCAMP4-201ENST00000316097 PRAC2D3DTV9 90 aa13.16□□□□□ -0.3
SCAMP4-201ENST00000316097 SPATA25Q9BR10 227 aa13.16□□□□□ -0.3
SCAMP4-201ENST00000316097 A0A1B0GV72 72 aa13.15□□□□□ -0.3
SCAMP4-201ENST00000316097 LY6EQ16553 131 aa13.15□□□□□ -0.3
SCAMP4-201ENST00000316097 GAGE13Q4V321 117 aa13.15□□□□□ -0.3
SCAMP4-201ENST00000316097 IL17RELQ6ZVW7 336 aa13.15□□□□□ -0.3
SCAMP4-201ENST00000316097 LINC00527Q9UJ94 153 aa13.15□□□□□ -0.3
SCAMP4-201ENST00000316097 TAL2Q16559 108 aa13.15□□□□□ -0.31
SCAMP4-201ENST00000316097 ATP6V0BQ99437 205 aa13.15□□□□□ -0.31
SCAMP4-201ENST00000316097 B4DSR2 109 aa13.14□□□□□ -0.31
SCAMP4-201ENST00000316097 INSL3P51460 131 aa13.14□□□□□ -0.31
SCAMP4-201ENST00000316097 LAGE3Q14657 143 aa13.14□□□□□ -0.31
SCAMP4-201ENST00000316097 UFC1Q9Y3C8 167 aa13.14□□□□□ -0.31
SCAMP4-201ENST00000316097 A0A087WX48 190 aa13.14□□□□□ -0.31
SCAMP4-201ENST00000316097 ECSCRQ19T08 205 aa13.14□□□□□ -0.31
SCAMP4-201ENST00000316097 RRN3P1Q2M238 152 aa13.14□□□□□ -0.31
SCAMP4-201ENST00000316097 ZNF48Q96MX3 618 aaPredicted RBP13.14□□□□□ -0.31
SCAMP4-201ENST00000316097 G3V318 75 aa13.13□□□□□ -0.31
SCAMP4-201ENST00000316097 RNF182Q8N6D2 247 aa13.13□□□□□ -0.31
SCAMP4-201ENST00000316097 IGKV3D-20A0A0C4DH25 116 aa13.13□□□□□ -0.31
SCAMP4-201ENST00000316097 LCNL1Q6ZST4 164 aa13.13□□□□□ -0.31
SCAMP4-201ENST00000316097 TEX15Q9BXT5 2789 aa13.12□□□□□ -0.31
SCAMP4-201ENST00000316097 A0A096LNT2 108 aa13.12□□□□□ -0.31
SCAMP4-201ENST00000316097 ATP6V0E1O15342 81 aa13.12□□□□□ -0.31
SCAMP4-201ENST00000316097 TGFAP01135 160 aa13.12□□□□□ -0.31
SCAMP4-201ENST00000316097 PLA2G2AP14555 144 aa13.12□□□□□ -0.31
SCAMP4-201ENST00000316097 ATP5G2Q06055 141 aa13.12□□□□□ -0.31
SCAMP4-201ENST00000316097 PRO0461Q9UI25 63 aa13.12□□□□□ -0.31
SCAMP4-201ENST00000316097 CTSGP08311 255 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms