RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 IGHV3-16A0A0C4DH30 117 aa10.81□□□□□ -0.68
SPAST-201ENST00000315285 FOXE3Q13461 319 aa10.81□□□□□ -0.68
SPAST-201ENST00000315285 MSMPQ1L6U9 139 aa10.81□□□□□ -0.68
SPAST-201ENST00000315285 ODF3L1Q8IXM7 274 aa10.81□□□□□ -0.68
SPAST-201ENST00000315285 NPBQ8NG41 125 aa10.81□□□□□ -0.68
SPAST-201ENST00000315285 CFHR4Q92496 578 aa10.81□□□□□ -0.68
SPAST-201ENST00000315285 TRAV8-3A0A0A6YYJ7 113 aa10.8□□□□□ -0.68
SPAST-201ENST00000315285 ZNF625Q96I27 306 aaPredicted RBP10.8□□□□□ -0.68
SPAST-201ENST00000315285 JPT2Q9H910 190 aa10.8□□□□□ -0.68
SPAST-201ENST00000315285 IGLV11-55A0A075B6I3 123 aa10.8□□□□□ -0.68
SPAST-201ENST00000315285 RBAKDNA6NC62 111 aa10.8□□□□□ -0.68
SPAST-201ENST00000315285 DEFB130BP0DP73 79 aa10.8□□□□□ -0.68
SPAST-201ENST00000315285 DEFB130AP0DP74 79 aa10.8□□□□□ -0.68
SPAST-201ENST00000315285 DYSFO75923 2080 aa10.8□□□□□ -0.68
SPAST-201ENST00000315285 NCKAP5O14513 1909 aa10.8□□□□□ -0.68
SPAST-201ENST00000315285 IGHV7-81A0A0B4J1V7 117 aa10.8□□□□□ -0.68
SPAST-201ENST00000315285 K7EP34 96 aa10.8□□□□□ -0.68
SPAST-201ENST00000315285 WISP2O76076 250 aa10.8□□□□□ -0.68
SPAST-201ENST00000315285 MRPL53Q96EL3 112 aaKnown RBP10.8□□□□□ -0.68
SPAST-201ENST00000315285 F6UB75 175 aa10.79□□□□□ -0.68
SPAST-201ENST00000315285 CENPVL3A0A0U1RRI6 287 aa10.79□□□□□ -0.68
SPAST-201ENST00000315285 H3BUA1 57 aa10.79□□□□□ -0.68
SPAST-201ENST00000315285 PRR14LQ5THK1 2151 aa10.79□□□□□ -0.68
SPAST-201ENST00000315285 CR1LQ2VPA4 569 aa10.79□□□□□ -0.68
SPAST-201ENST00000315285 LENEPQ9Y5L5 61 aa10.79□□□□□ -0.68
SPAST-201ENST00000315285 K7EP13 123 aa10.79□□□□□ -0.68
SPAST-201ENST00000315285 SIVA1O15304 175 aa10.79□□□□□ -0.68
SPAST-201ENST00000315285 IGLV2-23P01705 113 aa10.79□□□□□ -0.68
SPAST-201ENST00000315285 P0C879 139 aa10.79□□□□□ -0.68
SPAST-201ENST00000315285 TDRG1Q3Y452 100 aa10.79□□□□□ -0.68
SPAST-201ENST00000315285 GAGE12JA6NER3 117 aa10.78□□□□□ -0.68
SPAST-201ENST00000315285 INS-IGF2F8WCM5 200 aa10.78□□□□□ -0.68
SPAST-201ENST00000315285 GAGE4Q13068 117 aa10.78□□□□□ -0.68
SPAST-201ENST00000315285 GAGE5Q13069 117 aa10.78□□□□□ -0.68
SPAST-201ENST00000315285 ETDBQ3ZM63 59 aa10.78□□□□□ -0.68
SPAST-201ENST00000315285 TRBV20-1A0A075B6N2 111 aa10.78□□□□□ -0.68
SPAST-201ENST00000315285 A0A1W2PPM0 123 aa10.78□□□□□ -0.68
SPAST-201ENST00000315285 E7EUB6 86 aa10.78□□□□□ -0.68
SPAST-201ENST00000315285 CEND1Q8N111 149 aa10.78□□□□□ -0.68
SPAST-201ENST00000315285 J3QLI3 93 aa10.78□□□□□ -0.68
SPAST-201ENST00000315285 CTSGP08311 255 aa10.78□□□□□ -0.68
SPAST-201ENST00000315285 TAL2Q16559 108 aa10.78□□□□□ -0.68
SPAST-201ENST00000315285 MRPL36Q9P0J6 103 aaKnown RBP10.77□□□□□ -0.68
SPAST-201ENST00000315285 IGLV1-47P01700 117 aa10.77□□□□□ -0.68
SPAST-201ENST00000315285 GNRH2O43555 120 aa10.77□□□□□ -0.69
SPAST-201ENST00000315285 GATA1P15976 413 aaPredicted RBP10.77□□□□□ -0.69
SPAST-201ENST00000315285 LINC00173Q6ZV60 143 aa10.77□□□□□ -0.69
SPAST-201ENST00000315285 MED12LQ86YW9 2145 aa10.77□□□□□ -0.69
SPAST-201ENST00000315285 ELANEP08246 267 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 LGALS1P09382 135 aaKnown RBP10.76□□□□□ -0.69
SPAST-201ENST00000315285 ZNF493Q6ZR52 646 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 GTSF1Q8WW33 167 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 ADAMTS9Q9P2N4 1935 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 K7ERJ3 54 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 SPINK8P0C7L1 97 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 KLF12Q9Y4X4 402 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 IGHV3-38A0A0C4DH36 116 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 TEX22C9J3V5 150 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 AZU1P20160 251 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 Q6ZVH6 145 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 PCP2Q8IVA1 136 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 ZNRF2Q8NHG8 242 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 ATP6V0BQ99437 205 aa10.76□□□□□ -0.69
SPAST-201ENST00000315285 F8W1H4 67 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 SS18Q15532 418 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 Q96MF0 132 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 NDUFA12Q9UI09 145 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 TNCP24821 2201 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 CHD3Q12873 2000 aaKnown RBP10.75□□□□□ -0.69
SPAST-201ENST00000315285 PROP1O75360 226 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 J3QQQ9 107 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 SRSF2Q01130 221 aaKnown RBP10.75□□□□□ -0.69
SPAST-201ENST00000315285 CFHR3Q02985 330 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 OVOL2Q9BRP0 275 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 MSRB1Q9NZV6 116 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 RNF114Q9Y508 228 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 PRSS29PA6NIE9 313 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 FRMD6-AS1P0C7T7 363 aa10.75□□□□□ -0.69
SPAST-201ENST00000315285 BRWD1-AS2P59051 145 aa10.74□□□□□ -0.69
SPAST-201ENST00000315285 ZNF295-AS1Q8N0V1 137 aa10.74□□□□□ -0.69
SPAST-201ENST00000315285 TCF15Q12870 199 aa10.74□□□□□ -0.69
SPAST-201ENST00000315285 SPRY2O43597 315 aa10.74□□□□□ -0.69
SPAST-201ENST00000315285 BUB3O43684 328 aa10.74□□□□□ -0.69
SPAST-201ENST00000315285 TRBV25-1A0A075B6N4 114 aa10.74□□□□□ -0.69
SPAST-201ENST00000315285 K7EMI3 77 aa10.74□□□□□ -0.69
SPAST-201ENST00000315285 LINC01545Q5VT33 79 aa10.74□□□□□ -0.69
SPAST-201ENST00000315285 PRO1854Q9UHT4 67 aa10.74□□□□□ -0.69
SPAST-201ENST00000315285 DEFB125Q8N687 156 aa10.73□□□□□ -0.69
SPAST-201ENST00000315285 Q8N9W7 124 aa10.73□□□□□ -0.69
SPAST-201ENST00000315285 CUL9Q8IWT3 2517 aa10.73□□□□□ -0.69
SPAST-201ENST00000315285 IGHV4-59P01825 116 aa10.73□□□□□ -0.69
SPAST-201ENST00000315285 FGF6P10767 208 aa10.73□□□□□ -0.69
SPAST-201ENST00000315285 DEFB112Q30KQ8 113 aa10.73□□□□□ -0.69
SPAST-201ENST00000315285 TSSC4Q9Y5U2 329 aaPredicted RBP10.73□□□□□ -0.69
SPAST-201ENST00000315285 CACNA1AO00555 2505 aa10.73□□□□□ -0.69
SPAST-201ENST00000315285 IGHV4-61A0A0C4DH41 118 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 WI2-2373I1.2A0A1W2PRP0 233 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 VWC2LB2RUY7 222 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 H3BMG7 143 aa10.72□□□□□ -0.69
SPAST-201ENST00000315285 FOXI2Q6ZQN5 318 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms