RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 WNK1Q9H4A3 2382 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 TRBV6-1A0A0K0K1D8 114 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 FAM231BA6NCW3 169 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 GAGE10A6NGK3 116 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 K7ERU9 68 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 FAM106AQ4KMX7 169 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 LINC01545Q5VT33 79 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 AP1S3Q96PC3 154 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 GFRA4Q9GZZ7 299 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 AGPAT4-IT1Q9H0P7 198 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 MS4A6AQ9H2W1 248 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 COX8AP10176 69 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 C16orf54Q6UWD8 224 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 C20orf173Q96LM9 149 aa9.48□□□□□ -0.89
RNF4-201ENST00000314289 GATA3P23771 443 aa9.47□□□□□ -0.89
RNF4-201ENST00000314289 CRIP2P52943 208 aaPredicted RBP9.47□□□□□ -0.89
RNF4-201ENST00000314289 TMEM97Q5BJF2 176 aa9.47□□□□□ -0.89
RNF4-201ENST00000314289 ZNF747Q9BV97 191 aa9.47□□□□□ -0.89
RNF4-201ENST00000314289 FASNP49327 2511 aaKnown RBP9.47□□□□□ -0.89
RNF4-201ENST00000314289 F6UB75 175 aa9.47□□□□□ -0.89
RNF4-201ENST00000314289 HAX1O00165 279 aa9.47□□□□□ -0.89
RNF4-201ENST00000314289 LOXL1Q08397 574 aaPredicted RBP9.47□□□□□ -0.89
RNF4-201ENST00000314289 GLMPQ8WWB7 406 aa9.47□□□□□ -0.89
RNF4-201ENST00000314289 RAB37Q96AX2 223 aa9.47□□□□□ -0.89
RNF4-201ENST00000314289 MSRB1Q9NZV6 116 aa9.47□□□□□ -0.89
RNF4-201ENST00000314289 GCN1Q92616 2671 aaKnown RBP9.46□□□□□ -0.89
RNF4-201ENST00000314289 H3BUT2 72 aa9.46□□□□□ -0.89
RNF4-201ENST00000314289 HOXA3O43365 443 aaPredicted RBP9.46□□□□□ -0.89
RNF4-201ENST00000314289 IFI27P40305 119 aaPredicted RBP9.46□□□□□ -0.89
RNF4-201ENST00000314289 OR10AG1Q8NH19 301 aa9.46□□□□□ -0.89
RNF4-201ENST00000314289 NPFFR1Q9GZQ6 430 aa9.46□□□□□ -0.89
RNF4-201ENST00000314289 U3KQE9 123 aa9.46□□□□□ -0.89
RNF4-201ENST00000314289 IGLV1-40P01703 118 aa9.46□□□□□ -0.9
RNF4-201ENST00000314289 RPS20P60866 119 aaKnown RBP9.46□□□□□ -0.9
RNF4-201ENST00000314289 GPHB5Q86YW7 130 aa9.46□□□□□ -0.9
RNF4-201ENST00000314289 WFDC3Q8IUB2 231 aa9.46□□□□□ -0.9
RNF4-201ENST00000314289 CSTL1Q9H114 145 aa9.46□□□□□ -0.9
RNF4-201ENST00000314289 SPRY2O43597 315 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 ZNF575Q86XF7 245 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 WFDC12Q8WWY7 111 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 RIGQ13278 110 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 AMN1Q8IY45 258 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 WFDC11Q8NEX6 87 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 USMG5Q96IX5 58 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 JMJD8Q96S16 334 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 SLC50A1Q9BRV3 221 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 UNC79Q9P2D8 2635 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 NIPBLQ6KC79 2804 aaeCLIP9.45□□□□□ -0.9
RNF4-201ENST00000314289 NDUFA4O00483 81 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 RHPN1-AS1Q9BWJ2 59 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 C11orf21Q9P2W6 132 aa9.45□□□□□ -0.9
RNF4-201ENST00000314289 AGRNO00468 2067 aa9.44□□□□□ -0.9
RNF4-201ENST00000314289 SMKR1H3BMG3 65 aa9.44□□□□□ -0.9
RNF4-201ENST00000314289 CACNG7P62955 275 aa9.44□□□□□ -0.9
RNF4-201ENST00000314289 TWIST1Q15672 202 aa9.44□□□□□ -0.9
RNF4-201ENST00000314289 TMEM78Q5T7P6 136 aa9.44□□□□□ -0.9
RNF4-201ENST00000314289 D6R8Y8 96 aa9.44□□□□□ -0.9
RNF4-201ENST00000314289 CFHR3Q02985 330 aa9.44□□□□□ -0.9
RNF4-201ENST00000314289 PRSS57Q6UWY2 283 aa9.44□□□□□ -0.9
RNF4-201ENST00000314289 PDZD2O15018 2839 aa9.43□□□□□ -0.9
RNF4-201ENST00000314289 SEC11AP67812 179 aa9.43□□□□□ -0.9
RNF4-201ENST00000314289 KIR3DS1Q14943 382 aa9.43□□□□□ -0.9
RNF4-201ENST00000314289 FER1L6-AS1Q8NA97 138 aa9.43□□□□□ -0.9
RNF4-201ENST00000314289 FABP5P3A8MUU1 101 aa9.43□□□□□ -0.9
RNF4-201ENST00000314289 NMUP48645 174 aa9.43□□□□□ -0.9
RNF4-201ENST00000314289 PRR9Q5T870 116 aa9.43□□□□□ -0.9
RNF4-201ENST00000314289 GTF2H5Q6ZYL4 71 aa9.43□□□□□ -0.9
RNF4-201ENST00000314289 KMT2BQ9UMN6 2715 aaPredicted RBP9.43□□□□□ -0.9
RNF4-201ENST00000314289 A0A0G2JLM5 398 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 PSMB8P28062 276 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 TMEM190Q8WZ59 177 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 AKAP9Q99996 3911 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 FGF6P10767 208 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 BMI1P35226 326 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 KRTAP1-3Q8IUG1 177 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 VPREB3Q9UKI3 123 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 A0A096LNJ9 63 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 IGKV3D-20A0A0C4DH25 116 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 A6NDN8 102 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 J3QLI3 93 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 SIGLEC8Q9NYZ4 499 aa9.42□□□□□ -0.9
RNF4-201ENST00000314289 NOTCH3Q9UM47 2321 aa9.41□□□□□ -0.9
RNF4-201ENST00000314289 C9orf118A6NHY6 69 aa9.41□□□□□ -0.9
RNF4-201ENST00000314289 GAS8-AS1O95177 125 aa9.41□□□□□ -0.9
RNF4-201ENST00000314289 DEFB136Q30KP8 78 aa9.41□□□□□ -0.9
RNF4-201ENST00000314289 C18orf65Q6ZTR6 163 aa9.41□□□□□ -0.9
RNF4-201ENST00000314289 DAZ1Q9NQZ3 744 aaKnown RBP9.41□□□□□ -0.9
RNF4-201ENST00000314289 H3BUA1 57 aa9.41□□□□□ -0.9
RNF4-201ENST00000314289 IGHV7-4-1A0A0J9YVY3 117 aa9.4□□□□□ -0.9
RNF4-201ENST00000314289 Q6YL49 198 aa9.4□□□□□ -0.9
RNF4-201ENST00000314289 PCP2Q8IVA1 136 aa9.4□□□□□ -0.9
RNF4-201ENST00000314289 PRELID3AQ96N28 172 aa9.4□□□□□ -0.9
RNF4-201ENST00000314289 DUX3Q96PT4 197 aa9.4□□□□□ -0.9
RNF4-201ENST00000314289 UFSP1Q6NVU6 142 aa9.4□□□□□ -0.9
RNF4-201ENST00000314289 H3BRM9 83 aa9.4□□□□□ -0.91
RNF4-201ENST00000314289 SYNJ2BPP57105 145 aa9.4□□□□□ -0.91
RNF4-201ENST00000314289 OR2K2Q8NGT1 345 aa9.4□□□□□ -0.91
RNF4-201ENST00000314289 C18orf15Q96N68 181 aa9.4□□□□□ -0.91
RNF4-201ENST00000314289 C9orf139Q6ZV77 190 aa9.39□□□□□ -0.91
RNF4-201ENST00000314289 COX8CQ7Z4L0 72 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms