RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 A0A1W2PRF3 423 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 A0A1W2PRM7 423 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 VWC2LB2RUY7 222 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 WT1-ASQ06250 92 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 TFF2Q03403 129 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 LCNL1Q6ZST4 164 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 IGHV1OR15-1A0A075B7D0 117 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 BEX4Q9NWD9 120 aaPredicted RBP7□□□□□ -1.29
COL6A5-202ENST00000312481 A0A1B0GXF2 115 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 Q0VFX4 171 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 GATA2P23769 480 aaPredicted RBP7□□□□□ -1.29
COL6A5-202ENST00000312481 hDV102S1A0JD36 115 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 CDKN1AP38936 164 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 PLA2G2CQ5R387 149 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 PRIMA1Q86XR5 153 aa7□□□□□ -1.29
COL6A5-202ENST00000312481 A0A087WV48 116 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 C11orf86A6NJI1 115 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 E9PLD3 99 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 TRGV4A0A0C4DH28 118 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 TRBV10-1A0A0K0K1A3 114 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 M0QXV9 152 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 TM2D2Q9BX73 214 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 TIMM17BO60830 172 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 NDUFS7O75251 213 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 NDUFC1O43677 76 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 MAJINQ3KP22 176 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 SPATA25Q9BR10 227 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 IGHV1-58A0A0C4DH39 117 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 F8WEM9 126 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 TP73-AS1Q9UF72 201 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 A0A0G2JNJ9 132 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 Q9UFV3 132 aa6.99□□□□□ -1.29
COL6A5-202ENST00000312481 A4D1N5 150 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 ZNF491Q8N8L2 437 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 ZC2HC1AQ96GY0 325 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 FAM167A-AS1Q96KT0 104 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 CNFNQ9BYD5 112 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 TP53TG1Q9Y2A0 90 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 IGKV2-40A0A087WW87 121 aaPredicted RBP6.98□□□□□ -1.29
COL6A5-202ENST00000312481 FAM240AA0A1B0GVK7 77 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 CGB1A6NKQ9 187 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 IGKV2D-40P01614 121 aaPredicted RBP6.98□□□□□ -1.29
COL6A5-202ENST00000312481 YPEL4Q96NS1 127 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 APOC4P55056 127 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 ZNF876PQ49A33 203 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 IGHV7-4-1A0A0J9YVY3 117 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 RHPN1-AS1Q9BWJ2 59 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 CRIM1Q9NZV1 1036 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 COL27A1Q8IZC6 1860 aaPredicted RBP6.98□□□□□ -1.29
COL6A5-202ENST00000312481 IGF2RP11717 2491 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 VSIG2Q96IQ7 327 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 C9JAW5 83 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 TRACP01848 142 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 TOMM6Q96B49 74 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 DSCR8Q96T75 97 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 CITED2Q99967 270 aaPredicted RBP6.98□□□□□ -1.29
COL6A5-202ENST00000312481 PRRC2CQ9Y520 2896 aaKnown RBP6.98□□□□□ -1.29
COL6A5-202ENST00000312481 C12orf74Q32Q52 190 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 C9orf153Q5TBE3 101 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 LHFPL4Q7Z7J7 247 aa6.98□□□□□ -1.29
COL6A5-202ENST00000312481 ST6GALNAC6Q969X2 333 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 TMEM243Q9BU79 118 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 CEP295Q9C0D2 2601 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 IGLV11-55A0A075B6I3 123 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 TRAV3A0A0B4J244 114 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 C19orf71A6NCJ1 209 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 SAA4P35542 130 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 TFPI2P48307 235 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 RNF183Q96D59 192 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 IGHV3OR16-12A0A075B7B8 117 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 PPIFP30405 207 aaKnown RBP6.97□□□□□ -1.29
COL6A5-202ENST00000312481 WFDC12Q8WWY7 111 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 HOXD3P31249 432 aaPredicted RBP6.97□□□□□ -1.29
COL6A5-202ENST00000312481 ZFP2Q6ZN57 461 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 GATD1Q8NB37 220 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 LOXP28300 417 aaPredicted RBP6.97□□□□□ -1.29
COL6A5-202ENST00000312481 SLC25A29Q8N8R3 303 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 IGHV4-39P01824 125 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 PIP4P1Q86T03 277 aa6.97□□□□□ -1.29
COL6A5-202ENST00000312481 PINLYPA6NC86 204 aa6.96□□□□□ -1.29
COL6A5-202ENST00000312481 C6orf226Q5I0X4 101 aa6.96□□□□□ -1.29
COL6A5-202ENST00000312481 CFC1BP0CG36 223 aa6.96□□□□□ -1.29
COL6A5-202ENST00000312481 CFC1P0CG37 223 aa6.96□□□□□ -1.29
COL6A5-202ENST00000312481 CYYR1Q96J86 154 aa6.96□□□□□ -1.29
COL6A5-202ENST00000312481 SPAG8Q99932 426 aaPredicted RBP6.96□□□□□ -1.29
COL6A5-202ENST00000312481 FGF6P10767 208 aa6.96□□□□□ -1.29
COL6A5-202ENST00000312481 NDUFA12Q9UI09 145 aa6.96□□□□□ -1.29
COL6A5-202ENST00000312481 LY6G6EA0A0G2JKS1 128 aa6.96□□□□□ -1.3
COL6A5-202ENST00000312481 FOXG1P55316 489 aaPredicted RBP6.96□□□□□ -1.3
COL6A5-202ENST00000312481 U3KQA8 63 aa6.96□□□□□ -1.3
COL6A5-202ENST00000312481 G3V4G9 280 aa6.96□□□□□ -1.3
COL6A5-202ENST00000312481 K7EN84 100 aa6.96□□□□□ -1.3
COL6A5-202ENST00000312481 PAX4O43316 350 aa6.96□□□□□ -1.3
COL6A5-202ENST00000312481 ITLN2Q8WWU7 325 aaPredicted RBP6.96□□□□□ -1.3
COL6A5-202ENST00000312481 AJUBAQ96IF1 538 aa6.96□□□□□ -1.3
COL6A5-202ENST00000312481 METRNQ9UJH8 293 aa6.96□□□□□ -1.3
COL6A5-202ENST00000312481 U3KQK5 164 aa6.96□□□□□ -1.3
COL6A5-202ENST00000312481 TRAV40A0A0B4J280 105 aa6.96□□□□□ -1.3
COL6A5-202ENST00000312481 J3KT08 172 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms