RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 CIDEAO60543 219 aa11.15□□□□□ -0.62
SCUBE2-201ENST00000309263 C15orf32Q32M92 178 aa11.15□□□□□ -0.62
SCUBE2-201ENST00000309263 GAGE13Q4V321 117 aa11.15□□□□□ -0.62
SCUBE2-201ENST00000309263 OR11H1Q8NG94 326 aa11.15□□□□□ -0.62
SCUBE2-201ENST00000309263 OR11H2Q8NH07 326 aa11.15□□□□□ -0.62
SCUBE2-201ENST00000309263 CEACAM3P40198 252 aa11.15□□□□□ -0.62
SCUBE2-201ENST00000309263 C12orf74Q32Q52 190 aa11.15□□□□□ -0.62
SCUBE2-201ENST00000309263 MRPL16Q9NX20 251 aaKnown RBP11.15□□□□□ -0.62
SCUBE2-201ENST00000309263 SCGB2A1O75556 95 aa11.14□□□□□ -0.63
SCUBE2-201ENST00000309263 DEFB1P60022 68 aa11.14□□□□□ -0.63
SCUBE2-201ENST00000309263 ZNF672Q499Z4 452 aaPredicted RBP11.14□□□□□ -0.63
SCUBE2-201ENST00000309263 SMAD5-AS1Q9Y6J3 95 aa11.14□□□□□ -0.63
SCUBE2-201ENST00000309263 ZANQ9Y493 2812 aa11.14□□□□□ -0.63
SCUBE2-201ENST00000309263 LAGE3Q14657 143 aa11.14□□□□□ -0.63
SCUBE2-201ENST00000309263 TRBV6-1A0A0K0K1D8 114 aa11.14□□□□□ -0.63
SCUBE2-201ENST00000309263 TNFRSF13BO14836 293 aaPredicted RBP11.14□□□□□ -0.63
SCUBE2-201ENST00000309263 CTSGP08311 255 aa11.14□□□□□ -0.63
SCUBE2-201ENST00000309263 IGLC6P0CF74 106 aa11.14□□□□□ -0.63
SCUBE2-201ENST00000309263 ATP5LO75964 103 aa11.13□□□□□ -0.63
SCUBE2-201ENST00000309263 SCGB3A1Q96QR1 104 aa11.13□□□□□ -0.63
SCUBE2-201ENST00000309263 GLMPQ8WWB7 406 aa11.13□□□□□ -0.63
SCUBE2-201ENST00000309263 UBTD1Q9HAC8 227 aa11.13□□□□□ -0.63
SCUBE2-201ENST00000309263 DOPEY1Q5JWR5 2465 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 IGLV11-55A0A075B6I3 123 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 B9A039 149 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 CD300EQ496F6 205 aaPredicted RBP11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 FOXI2Q6ZQN5 318 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 SPAG8Q99932 426 aaPredicted RBP11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 PGPEP1Q9NXJ5 209 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 CSMD2Q7Z408 3487 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 IGKV3D-20A0A0C4DH25 116 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 AGPAT4-IT1Q9H0P7 198 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 ZNF462Q96JM2 2506 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 PSMB2P49721 201 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 IGFL3Q6UXB1 125 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 GATD1Q8NB37 220 aa11.12□□□□□ -0.63
SCUBE2-201ENST00000309263 G3V318 75 aa11.11□□□□□ -0.63
SCUBE2-201ENST00000309263 PAX8Q06710 450 aa11.11□□□□□ -0.63
SCUBE2-201ENST00000309263 Q8N8P6 123 aa11.11□□□□□ -0.63
SCUBE2-201ENST00000309263 C14orf178Q8N769 122 aaPredicted RBP11.11□□□□□ -0.63
SCUBE2-201ENST00000309263 F8W735 103 aaPredicted RBP11.1□□□□□ -0.63
SCUBE2-201ENST00000309263 TIMD4Q96H15 378 aa11.1□□□□□ -0.63
SCUBE2-201ENST00000309263 C16orf92Q96LL3 132 aa11.1□□□□□ -0.63
SCUBE2-201ENST00000309263 SPOCK3Q9BQ16 436 aa11.1□□□□□ -0.63
SCUBE2-201ENST00000309263 C20orf78Q9BR46 151 aa11.1□□□□□ -0.63
SCUBE2-201ENST00000309263 H7C2G1 150 aa11.1□□□□□ -0.63
SCUBE2-201ENST00000309263 IGHG4P01861 327 aa11.1□□□□□ -0.63
SCUBE2-201ENST00000309263 SPANXB1Q9NS25 103 aaPredicted RBP11.1□□□□□ -0.63
SCUBE2-201ENST00000309263 SRSF1Q07955 248 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCUBE2-201ENST00000309263 CHTOPQ9Y3Y2 248 aaKnown RBP11.1□□□□□ -0.63
SCUBE2-201ENST00000309263 NDUFS8O00217 210 aa11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 IGF1P05019 195 aa11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 HLA-DRB4P13762 266 aa11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 KLHL30-AS1Q8NEE0 82 aa11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 PTH2Q96A98 100 aa11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 HLA-DRB4X5D2U9 266 aa11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 ZNF815PA8K554 130 aa11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 RPL39LQ96EH5 51 aaKnown RBP11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 A0A1B0GV72 72 aa11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 LINC01549A6NIU2 74 aa11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 F8W1H4 67 aa11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 HOXA3O43365 443 aaPredicted RBP11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 PRRC2AP48634 2157 aaKnown RBP11.09□□□□□ -0.63
SCUBE2-201ENST00000309263 HIGD1BQ9P298 99 aa11.08□□□□□ -0.64
SCUBE2-201ENST00000309263 FASNP49327 2511 aaKnown RBP11.08□□□□□ -0.64
SCUBE2-201ENST00000309263 E9PLD3 99 aa11.08□□□□□ -0.64
SCUBE2-201ENST00000309263 SCGB1C2P0DMR2 95 aa11.08□□□□□ -0.64
SCUBE2-201ENST00000309263 CKS1BP61024 79 aa11.08□□□□□ -0.64
SCUBE2-201ENST00000309263 RAB9AP51151 201 aa11.08□□□□□ -0.64
SCUBE2-201ENST00000309263 CLUHP3Q96NS8 147 aa11.08□□□□□ -0.64
SCUBE2-201ENST00000309263 SMPXQ9UHP9 88 aa11.08□□□□□ -0.64
SCUBE2-201ENST00000309263 PHLDA3Q9Y5J5 127 aa11.08□□□□□ -0.64
SCUBE2-201ENST00000309263 A0A087WX48 190 aa11.07□□□□□ -0.64
SCUBE2-201ENST00000309263 HTN1P15515 57 aa11.07□□□□□ -0.64
SCUBE2-201ENST00000309263 CCDC144NLQ6NUI1 221 aa11.07□□□□□ -0.64
SCUBE2-201ENST00000309263 VMO1Q7Z5L0 202 aa11.07□□□□□ -0.64
SCUBE2-201ENST00000309263 SYT8Q8NBV8 401 aa11.07□□□□□ -0.64
SCUBE2-201ENST00000309263 PHLDA1Q8WV24 401 aaPredicted RBP11.07□□□□□ -0.64
SCUBE2-201ENST00000309263 RNF5Q99942 180 aa11.07□□□□□ -0.64
SCUBE2-201ENST00000309263 LY6DQ14210 128 aa11.07□□□□□ -0.64
SCUBE2-201ENST00000309263 TM2D2Q9BX73 214 aa11.07□□□□□ -0.64
SCUBE2-201ENST00000309263 F5H697 171 aa11.07□□□□□ -0.64
SCUBE2-201ENST00000309263 RRN3P1Q2M238 152 aa11.07□□□□□ -0.64
SCUBE2-201ENST00000309263 LY6LH3BQJ8 138 aa11.06□□□□□ -0.64
SCUBE2-201ENST00000309263 SLC25A16P16260 332 aa11.06□□□□□ -0.64
SCUBE2-201ENST00000309263 SRD5A1P18405 259 aa11.06□□□□□ -0.64
SCUBE2-201ENST00000309263 LINC01548A6NM66 108 aa11.06□□□□□ -0.64
SCUBE2-201ENST00000309263 PRADC1Q9BSG0 188 aa11.06□□□□□ -0.64
SCUBE2-201ENST00000309263 H7C1H1 209 aa11.06□□□□□ -0.64
SCUBE2-201ENST00000309263 TMEM219Q86XT9 240 aa11.06□□□□□ -0.64
SCUBE2-201ENST00000309263 MYMXA0A1B0GTQ4 84 aa11.05□□□□□ -0.64
SCUBE2-201ENST00000309263 ATP6V0E1O15342 81 aa11.05□□□□□ -0.64
SCUBE2-201ENST00000309263 BUB3O43684 328 aa11.05□□□□□ -0.64
SCUBE2-201ENST00000309263 LY6EQ16553 131 aa11.05□□□□□ -0.64
SCUBE2-201ENST00000309263 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.05□□□□□ -0.64
SCUBE2-201ENST00000309263 METTL26Q96S19 204 aa11.05□□□□□ -0.64
SCUBE2-201ENST00000309263 ATP6V0BQ99437 205 aa11.05□□□□□ -0.64
SCUBE2-201ENST00000309263 F8VRH5 84 aa11.05□□□□□ -0.64
SCUBE2-201ENST00000309263 PLNP26678 52 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms