RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 IGHV4-4A0A075B6R2 117 aa7.81□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 FABP5P3A8MUU1 101 aa7.81□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 LTAP01374 205 aa7.81□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 TYMSP04818 313 aa7.81□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 ZNF80P51504 273 aaPredicted RBP7.81□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 TDRG1Q3Y452 100 aa7.81□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 FAM162BQ5T6X4 162 aa7.81□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 C11orf52Q96A22 123 aa7.81□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 SPXQ9BT56 116 aa7.81□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 F5H768 121 aa7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 SPINK4O60575 86 aa7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 S100A4P26447 101 aaKnown RBP7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 RPL35P42766 123 aaKnown RBP7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 LGALS9BQ3B8N2 356 aa7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 TEX261Q6UWH6 196 aa7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 Q6ZTI0 123 aa7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 BAGE2Q86Y30 109 aa7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 NHLRC2Q8NBF2 726 aa7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 ZC2HC1AQ96GY0 325 aa7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 FAM210BQ96KR6 192 aa7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 NDUFAF3Q9BU61 184 aa7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 MRPL16Q9NX20 251 aaKnown RBP7.8□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 RBFOX3A6NFN3 312 aa7.79□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 B4DEV8 164 aa7.79□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 GNRH2O43555 120 aa7.79□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 SH2D1AO60880 128 aa7.79□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 ORM1P02763 201 aa7.79□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 COX8CQ7Z4L0 72 aa7.79□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 LINC00612Q8N6U2 182 aa7.79□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 MED9Q9NWA0 146 aa7.79□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 MDFICQ9P1T7 246 aa7.79□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 IGHV3-16A0A0C4DH30 117 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 LCE6AA0A183 80 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 M0R2P5 195 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 ASIPP42127 132 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 GNG4P50150 75 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 OR5I1Q13606 314 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 CENPWQ5EE01 88 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 TOR2AQ5JU69 321 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 PRR27Q6MZM9 219 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 C15orf53Q8NAA6 179 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 LYPD6BQ8NI32 183 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 DERL1Q9BUN8 251 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 EIF5A2Q9GZV4 153 aaKnown RBP7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 CSMD3Q7Z407 3707 aa7.78□□□□□ -1.16
CSPG4P1Y-201ENST00000306641 MUC4Q99102 2169 aa7.77□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 M0R036 132 aa7.77□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 LY6G6CO95867 125 aa7.77□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 MGST1P10620 155 aaKnown RBP7.77□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 ZNF674Q2M3X9 581 aa7.77□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 ZNF506Q5JVG8 444 aa7.77□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 TMEM88Q6PEY1 159 aa7.77□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 SMIM12Q96EX1 92 aa7.77□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 BIN3Q9NQY0 253 aa7.77□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 C11orf21Q9P2W6 132 aa7.77□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 APLNQ9ULZ1 77 aa7.77□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 STARD9Q9P2P6 4700 aa7.76□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 IGKV3D-20A0A0C4DH25 116 aa7.76□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 TMEM250H0YL14 139 aa7.76□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 CEBPGP53567 150 aa7.76□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 LINC01559Q495D7 138 aa7.76□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 LINC00476Q8WZB0 136 aa7.76□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 DAZAP1Q96EP5 407 aaKnown RBP7.76□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 C18orf15Q96N68 181 aa7.76□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 FAM210AQ96ND0 272 aa7.76□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 NACAE9PAV3 2078 aa7.75□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 TMSB15BA0A087X1C1 80 aa7.75□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 KRBOX1C9JBD0 128 aa7.75□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 C9JCJ5 164 aa7.75□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 H3BVH4 76 aa7.75□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 IGHV3-53P01767 116 aa7.75□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 CRIP1P50238 77 aa7.75□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 RASL10AQ92737 203 aa7.75□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 C9orf85Q96MD7 179 aa7.75□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 MLST8Q9BVC4 326 aa7.75□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 PARLQ9H300 379 aa7.75□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 TRAV4A0A0B4J268 109 aa7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 TRGV4A0A0C4DH28 118 aa7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 RAB19A4D1S5 217 aa7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 NUDT3O95989 172 aa7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 RNASE3P12724 160 aaKnown RBP7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 RAB14P61106 215 aa7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 SLAQ13239 276 aa7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 ZNF876PQ49A33 203 aa7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 LGALS9CQ6DKI2 356 aa7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 UBE2DNLQ8IWF7 75 aa7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 SYT8Q8NBV8 401 aa7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 OR4C5Q8NGB2 326 aa7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 PCNPQ8WW12 178 aaKnown RBP7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 IL36BQ9NZH7 164 aa7.74□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 TRAV26-1A0A087WT03 109 aa7.73□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 A0A0J9YY99 117 aa7.73□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 GRIFINA4D1Z8 144 aa7.73□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 NDUFS6O75380 124 aaKnown RBP7.73□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 P0DMU3 169 aa7.73□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 FAM231AP0DMU4 169 aa7.73□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 FAM231CP0DMU5 169 aa7.73□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 HOXA5P20719 270 aa7.73□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 PHLDA3Q9Y5J5 127 aa7.73□□□□□ -1.17
CSPG4P1Y-201ENST00000306641 XKRY2A2RUG3 117 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms