RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 IGHV7-4-1A0A0J9YVY3 117 aa10.08□□□□□ -0.8
COL3A1-201ENST00000304636 FRMD6-AS1P0C7T7 363 aa10.08□□□□□ -0.8
COL3A1-201ENST00000304636 FXYD2P54710 66 aa10.08□□□□□ -0.8
COL3A1-201ENST00000304636 NSUN5P1Q3KNT7 163 aa10.08□□□□□ -0.8
COL3A1-201ENST00000304636 IGHV3-16A0A0C4DH30 117 aa10.08□□□□□ -0.8
COL3A1-201ENST00000304636 CTSZQ9UBR2 303 aa10.08□□□□□ -0.8
COL3A1-201ENST00000304636 KIAA1671Q9BY89 1806 aa10.07□□□□□ -0.8
COL3A1-201ENST00000304636 GATA3P23771 443 aa10.07□□□□□ -0.8
COL3A1-201ENST00000304636 G3V4G9 280 aa10.07□□□□□ -0.8
COL3A1-201ENST00000304636 IGKV1-17P01599 117 aa10.07□□□□□ -0.8
COL3A1-201ENST00000304636 ROS1P08922 2347 aa10.07□□□□□ -0.8
COL3A1-201ENST00000304636 B5MCH6 92 aa10.07□□□□□ -0.8
COL3A1-201ENST00000304636 ACYP1P07311 99 aa10.07□□□□□ -0.8
COL3A1-201ENST00000304636 LINC01356Q8N9X3 169 aa10.07□□□□□ -0.8
COL3A1-201ENST00000304636 ZNRF2Q8NHG8 242 aa10.07□□□□□ -0.8
COL3A1-201ENST00000304636 K7EIM0 57 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 PFN2P35080 140 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 TMEM243Q9BU79 118 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 XCL2Q9UBD3 114 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 F8WEM9 126 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 GNRH2O43555 120 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 MSMBP08118 114 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 ODF3L1Q8IXM7 274 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 IGKV1OR2-108A0A075B7D4 117 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 TRBV6-1A0A0K0K1D8 114 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 WFDC2Q14508 124 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 TEN1Q86WV5 123 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 YPEL4Q96NS1 127 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 IGHV3-38A0A0C4DH36 116 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 C2orf70A6NJV1 201 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 H3BUA1 57 aa10.06□□□□□ -0.8
COL3A1-201ENST00000304636 NUP210Q8TEM1 1887 aaPredicted RBP10.06□□□□□ -0.8
COL3A1-201ENST00000304636 INTS1Q8N201 2190 aaKnown RBP10.05□□□□□ -0.8
COL3A1-201ENST00000304636 SPTBN1Q01082 2364 aaKnown RBP10.05□□□□□ -0.8
COL3A1-201ENST00000304636 PRSS47A8MTI9 375 aa10.05□□□□□ -0.8
COL3A1-201ENST00000304636 SPRNQ5BIV9 151 aa10.05□□□□□ -0.8
COL3A1-201ENST00000304636 MSRB1Q9NZV6 116 aa10.05□□□□□ -0.8
COL3A1-201ENST00000304636 P0C879 139 aa10.05□□□□□ -0.8
COL3A1-201ENST00000304636 NOTCH4Q99466 2003 aa10.05□□□□□ -0.8
COL3A1-201ENST00000304636 LINC01619G3V211 115 aa10.05□□□□□ -0.8
COL3A1-201ENST00000304636 NPBQ8NG41 125 aa10.05□□□□□ -0.8
COL3A1-201ENST00000304636 ABCA1O95477 2261 aa10.05□□□□□ -0.8
COL3A1-201ENST00000304636 SS18L2Q9UHA2 77 aa10.05□□□□□ -0.8
COL3A1-201ENST00000304636 RPL32P62910 135 aaKnown RBP10.04□□□□□ -0.8
COL3A1-201ENST00000304636 SPATA12Q7Z6I5 190 aa10.04□□□□□ -0.8
COL3A1-201ENST00000304636 C19orf71A6NCJ1 209 aa10.04□□□□□ -0.8
COL3A1-201ENST00000304636 IGLV11-55A0A075B6I3 123 aa10.03□□□□□ -0.8
COL3A1-201ENST00000304636 DEFB130BP0DP73 79 aa10.03□□□□□ -0.8
COL3A1-201ENST00000304636 DEFB130AP0DP74 79 aa10.03□□□□□ -0.8
COL3A1-201ENST00000304636 CRYBA4P53673 196 aa10.03□□□□□ -0.8
COL3A1-201ENST00000304636 PRR30Q53SZ7 412 aaPredicted RBP10.03□□□□□ -0.8
COL3A1-201ENST00000304636 RPL39LQ96EH5 51 aaKnown RBP10.03□□□□□ -0.8
COL3A1-201ENST00000304636 WNK2Q9Y3S1 2297 aa10.03□□□□□ -0.8
COL3A1-201ENST00000304636 GNLYP22749 145 aa10.03□□□□□ -0.8
COL3A1-201ENST00000304636 CTRLP40313 264 aa10.03□□□□□ -0.8
COL3A1-201ENST00000304636 FOXI1Q12951 378 aa10.03□□□□□ -0.8
COL3A1-201ENST00000304636 TCTEX1D4Q5JR98 221 aa10.03□□□□□ -0.8
COL3A1-201ENST00000304636 RITA1Q96K30 269 aa10.03□□□□□ -0.8
COL3A1-201ENST00000304636 A0A1B0GXF2 115 aa10.02□□□□□ -0.8
COL3A1-201ENST00000304636 WI2-2373I1.2A0A1W2PRP0 233 aa10.02□□□□□ -0.8
COL3A1-201ENST00000304636 SUMO4Q6EEV6 95 aa10.02□□□□□ -0.8
COL3A1-201ENST00000304636 CNOT1A5YKK6 2376 aaKnown RBP10.02□□□□□ -0.81
COL3A1-201ENST00000304636 PRSS33Q8NF86 280 aa10.02□□□□□ -0.81
COL3A1-201ENST00000304636 DOCK7Q96N67 2140 aa10.02□□□□□ -0.81
COL3A1-201ENST00000304636 F6UB75 175 aa10.02□□□□□ -0.81
COL3A1-201ENST00000304636 IGLV2-23P01705 113 aa10.02□□□□□ -0.81
COL3A1-201ENST00000304636 RNASE13Q5GAN3 156 aaKnown RBP10.02□□□□□ -0.81
COL3A1-201ENST00000304636 ZFP2Q6ZN57 461 aa10.02□□□□□ -0.81
COL3A1-201ENST00000304636 IGFBPL1Q8WX77 278 aa10.02□□□□□ -0.81
COL3A1-201ENST00000304636 TMEM126AQ9H061 195 aa10.02□□□□□ -0.81
COL3A1-201ENST00000304636 PKDREJQ9NTG1 2253 aa10.02□□□□□ -0.81
COL3A1-201ENST00000304636 BAALC-AS2P0C853 105 aa10.02□□□□□ -0.81
COL3A1-201ENST00000304636 CR1LQ2VPA4 569 aa10.02□□□□□ -0.81
COL3A1-201ENST00000304636 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.81
COL3A1-201ENST00000304636 HOXB4P17483 251 aaPredicted RBP10.01□□□□□ -0.81
COL3A1-201ENST00000304636 A4D1N5 150 aa10.01□□□□□ -0.81
COL3A1-201ENST00000304636 CTSGP08311 255 aa10.01□□□□□ -0.81
COL3A1-201ENST00000304636 ODF1Q14990 250 aa10.01□□□□□ -0.81
COL3A1-201ENST00000304636 ATP6V0E2Q8NHE4 81 aa10.01□□□□□ -0.81
COL3A1-201ENST00000304636 ZNF503Q96F45 646 aa10.01□□□□□ -0.81
COL3A1-201ENST00000304636 E9PLD3 99 aa10.01□□□□□ -0.81
COL3A1-201ENST00000304636 ZNF295-AS1Q8N0V1 137 aa10.01□□□□□ -0.81
COL3A1-201ENST00000304636 TOMM6Q96B49 74 aa10.01□□□□□ -0.81
COL3A1-201ENST00000304636 HAMPP81172 84 aa10.01□□□□□ -0.81
COL3A1-201ENST00000304636 MUSTN1Q8IVN3 82 aa10.01□□□□□ -0.81
COL3A1-201ENST00000304636 POLEQ07864 2286 aa10□□□□□ -0.81
COL3A1-201ENST00000304636 IGLV2-8P01709 118 aa10□□□□□ -0.81
COL3A1-201ENST00000304636 RBMY1FQ15415 496 aaKnown RBP10□□□□□ -0.81
COL3A1-201ENST00000304636 CRLF1O75462 422 aa10□□□□□ -0.81
COL3A1-201ENST00000304636 HERV-K104P63124 156 aa10□□□□□ -0.81
COL3A1-201ENST00000304636 Q9H8V8 135 aa10□□□□□ -0.81
COL3A1-201ENST00000304636 ZNF106Q9H2Y7 1883 aaKnown RBP10□□□□□ -0.81
COL3A1-201ENST00000304636 LINC01620Q4KN68 170 aa10□□□□□ -0.81
COL3A1-201ENST00000304636 EML6Q6ZMW3 1958 aa9.99□□□□□ -0.81
COL3A1-201ENST00000304636 K7ENP7 123 aa9.99□□□□□ -0.81
COL3A1-201ENST00000304636 BUB3O43684 328 aa9.99□□□□□ -0.81
COL3A1-201ENST00000304636 CHD3Q12873 2000 aaKnown RBP9.99□□□□□ -0.81
COL3A1-201ENST00000304636 CFHR3Q02985 330 aa9.99□□□□□ -0.81
COL3A1-201ENST00000304636 PLA2G2CQ5R387 149 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms