RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 Q6ZQT7 251 aa11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 NDFIP1Q9BT67 221 aa11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 C1QTNF4Q9BXJ3 329 aa11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 HLA-DRB4X5D2U9 266 aa11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 CSMD3Q7Z407 3707 aa11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 COLCA2A8K830 154 aa11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 H3BMM0 161 aa11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 SH2D1AO60880 128 aa11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 KIR3DS1Q14943 382 aa11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 ELOBQ15370 118 aa11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 C15orf54Q8N8G6 183 aa11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 PHLDA1Q8WV24 401 aaPredicted RBP11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 ODF3Q96PU9 254 aa11.63□□□□□ -0.55
SRGAP2C-201ENST00000304465 KLLNB2CW77 178 aa11.62□□□□□ -0.55
SRGAP2C-201ENST00000304465 DEFB4AO15263 64 aa11.62□□□□□ -0.55
SRGAP2C-201ENST00000304465 GATCO43716 136 aaKnown RBP11.62□□□□□ -0.55
SRGAP2C-201ENST00000304465 FAM162BQ5T6X4 162 aa11.62□□□□□ -0.55
SRGAP2C-201ENST00000304465 EBLN2Q6P2I7 272 aa11.62□□□□□ -0.55
SRGAP2C-201ENST00000304465 ZNF705GA8MUZ8 300 aaPredicted RBP11.61□□□□□ -0.55
SRGAP2C-201ENST00000304465 DUSP14O95147 198 aaKnown RBP11.61□□□□□ -0.55
SRGAP2C-201ENST00000304465 GIG44P09565 113 aaPredicted RBP11.61□□□□□ -0.55
SRGAP2C-201ENST00000304465 MIFP14174 115 aa11.61□□□□□ -0.55
SRGAP2C-201ENST00000304465 RYR3Q15413 4870 aa11.61□□□□□ -0.55
SRGAP2C-201ENST00000304465 IMMP2LQ96T52 175 aa11.61□□□□□ -0.55
SRGAP2C-201ENST00000304465 RPP21Q9H633 154 aaKnown RBP11.61□□□□□ -0.55
SRGAP2C-201ENST00000304465 IL36BQ9NZH7 164 aa11.61□□□□□ -0.55
SRGAP2C-201ENST00000304465 C11orf21Q9P2W6 132 aa11.61□□□□□ -0.55
SRGAP2C-201ENST00000304465 LY6G6CO95867 125 aa11.6□□□□□ -0.55
SRGAP2C-201ENST00000304465 P01737 135 aa11.6□□□□□ -0.55
SRGAP2C-201ENST00000304465 NANOS2P60321 138 aaKnown RBP11.6□□□□□ -0.55
SRGAP2C-201ENST00000304465 CT83Q5H943 113 aa11.6□□□□□ -0.55
SRGAP2C-201ENST00000304465 OR4B1Q8NGF8 309 aa11.6□□□□□ -0.55
SRGAP2C-201ENST00000304465 PYGO2Q9BRQ0 406 aa11.6□□□□□ -0.55
SRGAP2C-201ENST00000304465 XCL2Q9UBD3 114 aa11.6□□□□□ -0.55
SRGAP2C-201ENST00000304465 URGCP-MRPS24S4R325 110 aa11.6□□□□□ -0.55
SRGAP2C-201ENST00000304465 IGHV4-28A0A0C4DH34 117 aa11.59□□□□□ -0.55
SRGAP2C-201ENST00000304465 SMIM27A0A1W2PRY6 76 aa11.59□□□□□ -0.55
SRGAP2C-201ENST00000304465 IGKV3-20P01619 116 aa11.59□□□□□ -0.55
SRGAP2C-201ENST00000304465 CXCL1P09341 107 aa11.59□□□□□ -0.55
SRGAP2C-201ENST00000304465 RPL19P84098 196 aaKnown RBP11.59□□□□□ -0.55
SRGAP2C-201ENST00000304465 CLUHP3Q96NS8 147 aa11.59□□□□□ -0.55
SRGAP2C-201ENST00000304465 STARD9Q9P2P6 4700 aa11.59□□□□□ -0.55
SRGAP2C-201ENST00000304465 TGIF2-C20orf24A0A0A6YYL0 155 aa11.58□□□□□ -0.56
SRGAP2C-201ENST00000304465 FABP5P3A8MUU1 101 aa11.58□□□□□ -0.56
SRGAP2C-201ENST00000304465 FAM3BP58499 235 aaPredicted RBP11.58□□□□□ -0.56
SRGAP2C-201ENST00000304465 Q6AWC8 147 aa11.58□□□□□ -0.56
SRGAP2C-201ENST00000304465 Q8NAQ8 132 aa11.58□□□□□ -0.56
SRGAP2C-201ENST00000304465 TSKUQ8WUA8 353 aa11.58□□□□□ -0.56
SRGAP2C-201ENST00000304465 LINC00476Q8WZB0 136 aa11.58□□□□□ -0.56
SRGAP2C-201ENST00000304465 DAZAP1Q96EP5 407 aaKnown RBP11.58□□□□□ -0.56
SRGAP2C-201ENST00000304465 TRBV24-1A0A075B6N3 115 aa11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 OR2D3Q8NGH3 330 aa11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 GTSF1Q8WW33 167 aa11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 IGKV3D-20A0A0C4DH25 116 aa11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 J3KRW8 73 aa11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 M0R2Z0 102 aa11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 CRXO43186 299 aaPredicted RBP11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 GPX1P07203 203 aa11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 GZMBP10144 247 aa11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 RNASE4P34096 147 aaKnown RBP11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 LEPP41159 167 aa11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 LINC01559Q495D7 138 aa11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 CSNK1G2-AS1Q8NCQ2 148 aa11.57□□□□□ -0.56
SRGAP2C-201ENST00000304465 ZNF324O75467 553 aaPredicted RBP11.56□□□□□ -0.56
SRGAP2C-201ENST00000304465 RBMY1A1P0DJD3 496 aaKnown RBP11.56□□□□□ -0.56
SRGAP2C-201ENST00000304465 RBMY1CP0DJD4 496 aa11.56□□□□□ -0.56
SRGAP2C-201ENST00000304465 FOXA3P55318 350 aaPredicted RBP11.56□□□□□ -0.56
SRGAP2C-201ENST00000304465 TCL1AP56279 114 aa11.56□□□□□ -0.56
SRGAP2C-201ENST00000304465 RBMY1FQ15415 496 aaKnown RBP11.56□□□□□ -0.56
SRGAP2C-201ENST00000304465 SPINK13Q1W4C9 94 aa11.56□□□□□ -0.56
SRGAP2C-201ENST00000304465 GFI1BQ5VTD9 330 aa11.56□□□□□ -0.56
SRGAP2C-201ENST00000304465 NEU1Q99519 415 aa11.56□□□□□ -0.56
SRGAP2C-201ENST00000304465 X6R8D5 127 aa11.56□□□□□ -0.56
SRGAP2C-201ENST00000304465 A8MWL6 223 aa11.55□□□□□ -0.56
SRGAP2C-201ENST00000304465 CDKN1BP46527 198 aa11.55□□□□□ -0.56
SRGAP2C-201ENST00000304465 FXYD7P58549 80 aa11.55□□□□□ -0.56
SRGAP2C-201ENST00000304465 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.55□□□□□ -0.56
SRGAP2C-201ENST00000304465 GFRA4Q9GZZ7 299 aa11.55□□□□□ -0.56
SRGAP2C-201ENST00000304465 TRAV12-2A0A075B6T6 113 aa11.54□□□□□ -0.56
SRGAP2C-201ENST00000304465 IGHV3OR16-12A0A075B7B8 117 aa11.54□□□□□ -0.56
SRGAP2C-201ENST00000304465 TRAV21A0A0B4J279 112 aa11.54□□□□□ -0.56
SRGAP2C-201ENST00000304465 A0A1W2PPQ1 181 aa11.54□□□□□ -0.56
SRGAP2C-201ENST00000304465 C7orf71A4D174 169 aa11.54□□□□□ -0.56
SRGAP2C-201ENST00000304465 TMEM189A5PLL7 270 aa11.54□□□□□ -0.56
SRGAP2C-201ENST00000304465 FAM231BA6NCW3 169 aa11.54□□□□□ -0.56
SRGAP2C-201ENST00000304465 S100PP25815 95 aa11.54□□□□□ -0.56
SRGAP2C-201ENST00000304465 NUP35Q8NFH5 326 aa11.54□□□□□ -0.56
SRGAP2C-201ENST00000304465 TRAV9-1A0A075B6T8 112 aa11.53□□□□□ -0.56
SRGAP2C-201ENST00000304465 TMSB15BA0A087X1C1 80 aa11.53□□□□□ -0.56
SRGAP2C-201ENST00000304465 ORM1P02763 201 aa11.53□□□□□ -0.56
SRGAP2C-201ENST00000304465 TYMSP04818 313 aa11.53□□□□□ -0.56
SRGAP2C-201ENST00000304465 TSPOP30536 169 aa11.53□□□□□ -0.56
SRGAP2C-201ENST00000304465 KCNIP4Q6PIL6 250 aa11.53□□□□□ -0.56
SRGAP2C-201ENST00000304465 DYNC2H1Q8NCM8 4307 aaKnown RBP11.53□□□□□ -0.56
SRGAP2C-201ENST00000304465 TRAV12-3A0A0B4J271 114 aa11.52□□□□□ -0.56
SRGAP2C-201ENST00000304465 HIGD1CA8MV81 97 aa11.52□□□□□ -0.56
SRGAP2C-201ENST00000304465 IGLC6P0CF74 106 aa11.52□□□□□ -0.56
SRGAP2C-201ENST00000304465 RAB5AP20339 215 aa11.52□□□□□ -0.56
SRGAP2C-201ENST00000304465 FAM210BQ96KR6 192 aa11.52□□□□□ -0.56
SRGAP2C-201ENST00000304465 NAT8BQ9UHF3 227 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms