RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 Q6ZS92 163 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 IGHV7-4-1A0A0J9YVY3 117 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 IGKV1-39P01597 117 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 IGKV1D-39P04432 117 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 ZNF747Q9BV97 191 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 KAAG1Q9UBP8 84 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 EGR2P11161 476 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-201ENST00000302516 IGFL3Q6UXB1 125 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 LYPD2Q6UXB3 125 aa6.08□□□□□ -1.44
SF3B3-201ENST00000302516 MCRIP2Q9BUT9 160 aaKnown RBP6.07□□□□□ -1.44
SF3B3-201ENST00000302516 IGHV1-69P01742 117 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 CFC1BP0CG36 223 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 CFC1P0CG37 223 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 PRR20EP86478 221 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 PRR20CP86479 221 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 PRR20DP86480 221 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 PRR20BP86481 221 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 PRR20AP86496 221 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 SPG11Q96JI7 2443 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 WT1-ASQ06250 92 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 TMEM105Q8N8V8 129 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 C15orf53Q8NAA6 179 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 IGLC1P0CG04 106 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 IGHV3-53P01767 116 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 H0YGX0 51 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 DAD1P61803 113 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 TEN1Q86WV5 123 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 TRAV12-1A0A0B4J245 112 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 IGLV1-44P01699 117 aa6.07□□□□□ -1.44
SF3B3-201ENST00000302516 TRAV26-2A0A0B4J265 109 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 SYNJ2BPP57105 145 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 MSMBP08118 114 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 PRR31Q5SQ13 230 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 IGFL4Q6B9Z1 124 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 LINC00527Q9UJ94 153 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 SPINK13Q1W4C9 94 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 SH2D6Q7Z4S9 175 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 TEX48A0A1B0GUV7 120 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 E7EQL1 145 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 ANXA2RQ3ZCQ2 193 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 SLX1AQ9BQ83 275 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 DEFB131AP59861 70 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 DSCAMO60469 2012 aa6.06□□□□□ -1.44
SF3B3-201ENST00000302516 COL8A2P25067 703 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 Q71RC1 249 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-201ENST00000302516 ICOSQ9Y6W8 199 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 BRD3OSQ6XYD6 125 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 HAMPP81172 84 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 FUSP35637 526 aaKnown RBP eCLIP6.05□□□□□ -1.44
SF3B3-201ENST00000302516 WDR86Q86TI4 376 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 SPATA25Q9BR10 227 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 KLK9Q9UKQ9 250 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 IGF2BP2-AS1Q96M15 143 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 CCL25O15444 150 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 IGHG2P01859 326 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 FOXE3Q13461 319 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 F6UB75 175 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 DEFB130BP0DP73 79 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 DEFB130AP0DP74 79 aa6.05□□□□□ -1.44
SF3B3-201ENST00000302516 WNK1Q9H4A3 2382 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 IGLV3-9A0A075B6K5 115 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 LOXP28300 417 aaPredicted RBP6.04□□□□□ -1.44
SF3B3-201ENST00000302516 LINC00205P59089 165 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 SELENOKQ9Y6D0 94 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 BAALC-AS2P0C853 105 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 DKK2Q9UBU2 259 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 TRBV6-1A0A0K0K1D8 114 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 PFN2P35080 140 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 BDP1A6H8Y1 2624 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 IGLL5B9A064 214 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 DAZ2Q13117 558 aaKnown RBP6.04□□□□□ -1.44
SF3B3-201ENST00000302516 KRTAP27-1Q3LI81 207 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 DAZ4Q86SG3 579 aaKnown RBP6.04□□□□□ -1.44
SF3B3-201ENST00000302516 UBE2E2Q96LR5 201 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 BPESC1Q9GZL8 116 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 DAZ3Q9NR90 486 aaKnown RBP6.04□□□□□ -1.44
SF3B3-201ENST00000302516 A0A0B4J2C4 111 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 ELANEP08246 267 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 CACNA1AO00555 2505 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 hADV29S1A0JD25 119 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 PRSS29PA6NIE9 313 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 MED14OSP0DP75 135 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 RBM3P98179 157 aaKnown RBP6.04□□□□□ -1.44
SF3B3-201ENST00000302516 MLANAQ16655 118 aa6.04□□□□□ -1.44
SF3B3-201ENST00000302516 EXPH5Q8NEV8 1989 aa6.03□□□□□ -1.44
SF3B3-201ENST00000302516 GP9P14770 177 aa6.03□□□□□ -1.44
SF3B3-201ENST00000302516 CRYBA4P53673 196 aa6.03□□□□□ -1.44
SF3B3-201ENST00000302516 NPBQ8NG41 125 aa6.03□□□□□ -1.44
SF3B3-201ENST00000302516 ARHGAP32A7KAX9 2087 aa6.03□□□□□ -1.44
SF3B3-201ENST00000302516 F5H768 121 aa6.03□□□□□ -1.44
SF3B3-201ENST00000302516 NBL1P41271 181 aa6.03□□□□□ -1.44
SF3B3-201ENST00000302516 CTRLP40313 264 aa6.03□□□□□ -1.44
SF3B3-201ENST00000302516 C11orf44Q8N8P7 122 aa6.03□□□□□ -1.44
SF3B3-201ENST00000302516 HOXB4P17483 251 aaPredicted RBP6.03□□□□□ -1.44
SF3B3-201ENST00000302516 C5orf24Q7Z6I8 188 aa6.03□□□□□ -1.44
SF3B3-201ENST00000302516 PDE6GP18545 87 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 ZNRF2Q8NHG8 242 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 CR1LQ2VPA4 569 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 Q6ZR03 302 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 CITED2Q99967 270 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms