RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 DEFB109BQ30KR1 87 aa8.5□□□□□ -1.05
SNX20-201ENST00000300590 C11orf21Q9P2W6 132 aa8.5□□□□□ -1.05
SNX20-201ENST00000300590 BUB1B-PAK6H3BSN5 160 aa8.49□□□□□ -1.05
SNX20-201ENST00000300590 PLNP26678 52 aa8.49□□□□□ -1.05
SNX20-201ENST00000300590 MFAP4P55083 255 aa8.49□□□□□ -1.05
SNX20-201ENST00000300590 PDE6HQ13956 83 aa8.49□□□□□ -1.05
SNX20-201ENST00000300590 PPDPFLQ8WWR9 84 aa8.49□□□□□ -1.05
SNX20-201ENST00000300590 IGLV2-18A0A075B6J9 118 aa8.49□□□□□ -1.05
SNX20-201ENST00000300590 IGKV3D-20A0A0C4DH25 116 aa8.49□□□□□ -1.05
SNX20-201ENST00000300590 M0R381 172 aa8.49□□□□□ -1.05
SNX20-201ENST00000300590 C1orf210Q8IVY1 113 aa8.49□□□□□ -1.05
SNX20-201ENST00000300590 TCL1BO95988 128 aa8.48□□□□□ -1.05
SNX20-201ENST00000300590 DLX6P56179 175 aa8.48□□□□□ -1.05
SNX20-201ENST00000300590 RAX2Q96IS3 184 aa8.48□□□□□ -1.05
SNX20-201ENST00000300590 FAM110AQ9BQ89 295 aa8.48□□□□□ -1.05
SNX20-201ENST00000300590 SMAD5-AS1Q9Y6J3 95 aa8.48□□□□□ -1.05
SNX20-201ENST00000300590 IGHG4P01861 327 aa8.48□□□□□ -1.05
SNX20-201ENST00000300590 BSPH1Q075Z2 132 aa8.48□□□□□ -1.05
SNX20-201ENST00000300590 C21orf62Q9NYP8 219 aa8.48□□□□□ -1.05
SNX20-201ENST00000300590 FAM215AQ9Y5M1 114 aa8.48□□□□□ -1.05
SNX20-201ENST00000300590 A8MWV9 139 aa8.47□□□□□ -1.05
SNX20-201ENST00000300590 TEN1Q86WV5 123 aa8.47□□□□□ -1.05
SNX20-201ENST00000300590 ANKRD29Q8N6D5 301 aa8.47□□□□□ -1.05
SNX20-201ENST00000300590 YAE1D1Q9NRH1 226 aa8.47□□□□□ -1.05
SNX20-201ENST00000300590 SPTA1P02549 2419 aa8.47□□□□□ -1.05
SNX20-201ENST00000300590 ASH1LQ9NR48 2969 aaKnown RBP8.47□□□□□ -1.05
SNX20-201ENST00000300590 MBD3L4A6NDZ8 208 aaPredicted RBP8.47□□□□□ -1.05
SNX20-201ENST00000300590 MBD3L3A6NE82 208 aaPredicted RBP8.47□□□□□ -1.05
SNX20-201ENST00000300590 MBD3L5A6NJ08 208 aaPredicted RBP8.47□□□□□ -1.05
SNX20-201ENST00000300590 MGPP08493 103 aa8.47□□□□□ -1.05
SNX20-201ENST00000300590 NRACQ8N912 160 aa8.47□□□□□ -1.05
SNX20-201ENST00000300590 MBD3L2Q8NHZ7 208 aaPredicted RBP8.47□□□□□ -1.05
SNX20-201ENST00000300590 IGLV1-47P01700 117 aa8.46□□□□□ -1.05
SNX20-201ENST00000300590 ZNF688P0C7X2 276 aa8.46□□□□□ -1.05
SNX20-201ENST00000300590 FAM159AQ6UWV7 190 aa8.46□□□□□ -1.05
SNX20-201ENST00000300590 RPL39LQ96EH5 51 aaKnown RBP8.46□□□□□ -1.05
SNX20-201ENST00000300590 FANCD2OSQ96PS1 177 aa8.46□□□□□ -1.06
SNX20-201ENST00000300590 C9JAW5 83 aa8.45□□□□□ -1.06
SNX20-201ENST00000300590 IFITM1P13164 125 aa8.45□□□□□ -1.06
SNX20-201ENST00000300590 CD59P13987 128 aa8.45□□□□□ -1.06
SNX20-201ENST00000300590 MEIG1Q5JSS6 88 aa8.45□□□□□ -1.06
SNX20-201ENST00000300590 AGPAT4-IT1Q9H0P7 198 aa8.45□□□□□ -1.06
SNX20-201ENST00000300590 RAB1BQ9H0U4 201 aa8.45□□□□□ -1.06
SNX20-201ENST00000300590 BEX4Q9NWD9 120 aaPredicted RBP8.45□□□□□ -1.06
SNX20-201ENST00000300590 RELNP78509 3460 aa8.45□□□□□ -1.06
SNX20-201ENST00000300590 TMEM262E9PQX1 116 aa8.45□□□□□ -1.06
SNX20-201ENST00000300590 NDUFV3P56181 108 aaKnown RBP8.45□□□□□ -1.06
SNX20-201ENST00000300590 TRPT1Q86TN4 253 aaKnown RBP8.45□□□□□ -1.06
SNX20-201ENST00000300590 C14orf178Q8N769 122 aaPredicted RBP8.45□□□□□ -1.06
SNX20-201ENST00000300590 CRIP2P52943 208 aaPredicted RBP8.44□□□□□ -1.06
SNX20-201ENST00000300590 C2orf66Q6UXQ4 117 aa8.44□□□□□ -1.06
SNX20-201ENST00000300590 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
SNX20-201ENST00000300590 NBR2O15453 112 aa8.44□□□□□ -1.06
SNX20-201ENST00000300590 BRI3O95415 125 aa8.44□□□□□ -1.06
SNX20-201ENST00000300590 ATP6V0E2Q8NHE4 81 aa8.44□□□□□ -1.06
SNX20-201ENST00000300590 THBDP07204 575 aa8.44□□□□□ -1.06
SNX20-201ENST00000300590 S100A4P26447 101 aaKnown RBP8.44□□□□□ -1.06
SNX20-201ENST00000300590 LINC01559Q495D7 138 aa8.44□□□□□ -1.06
SNX20-201ENST00000300590 LYRM7Q5U5X0 104 aa8.44□□□□□ -1.06
SNX20-201ENST00000300590 Q6ZS46 218 aa8.44□□□□□ -1.06
SNX20-201ENST00000300590 C8orf31Q8N9H6 132 aa8.44□□□□□ -1.06
SNX20-201ENST00000300590 OR11H6Q8NGC7 330 aa8.44□□□□□ -1.06
SNX20-201ENST00000300590 RNASE6Q93091 150 aaKnown RBP8.44□□□□□ -1.06
SNX20-201ENST00000300590 CNFNQ9BYD5 112 aa8.44□□□□□ -1.06
SNX20-201ENST00000300590 TRAV4A0A0B4J268 109 aa8.43□□□□□ -1.06
SNX20-201ENST00000300590 LINC01546A6NGU7 62 aa8.43□□□□□ -1.06
SNX20-201ENST00000300590 F8W735 103 aaPredicted RBP8.43□□□□□ -1.06
SNX20-201ENST00000300590 TMEM170BQ5T4T1 132 aa8.43□□□□□ -1.06
SNX20-201ENST00000300590 ASCL5Q7RTU5 278 aa8.43□□□□□ -1.06
SNX20-201ENST00000300590 NDUFA11Q86Y39 141 aa8.43□□□□□ -1.06
SNX20-201ENST00000300590 RASL10AQ92737 203 aa8.43□□□□□ -1.06
SNX20-201ENST00000300590 AJUBAQ96IF1 538 aa8.43□□□□□ -1.06
SNX20-201ENST00000300590 IGF1P05019 195 aa8.43□□□□□ -1.06
SNX20-201ENST00000300590 NDPQ00604 133 aa8.43□□□□□ -1.06
SNX20-201ENST00000300590 BAALCQ8WXS3 180 aa8.43□□□□□ -1.06
SNX20-201ENST00000300590 IGHV3-64A0A075B6Q5 118 aa8.42□□□□□ -1.06
SNX20-201ENST00000300590 CRLF1O75462 422 aa8.42□□□□□ -1.06
SNX20-201ENST00000300590 LY6HO94772 140 aa8.42□□□□□ -1.06
SNX20-201ENST00000300590 CTSGP08311 255 aa8.42□□□□□ -1.06
SNX20-201ENST00000300590 DEFB1P60022 68 aa8.42□□□□□ -1.06
SNX20-201ENST00000300590 DCHS2Q6V1P9 2916 aa8.42□□□□□ -1.06
SNX20-201ENST00000300590 UBE2D1P51668 147 aa8.42□□□□□ -1.06
SNX20-201ENST00000300590 ATP5J2P56134 94 aa8.42□□□□□ -1.06
SNX20-201ENST00000300590 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
SNX20-201ENST00000300590 Q1RN00 199 aa8.42□□□□□ -1.06
SNX20-201ENST00000300590 NEXN-AS1Q8NBZ9 246 aa8.42□□□□□ -1.06
SNX20-201ENST00000300590 M0QXV9 152 aa8.42□□□□□ -1.06
SNX20-201ENST00000300590 DUSP14O95147 198 aaKnown RBP8.42□□□□□ -1.06
SNX20-201ENST00000300590 VCX2Q9H322 139 aa8.42□□□□□ -1.06
SNX20-201ENST00000300590 IGHV7-4-1A0A0J9YVY3 117 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 CDX4O14627 284 aaPredicted RBP8.41□□□□□ -1.06
SNX20-201ENST00000300590 SLC25A20O43772 301 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 IGHV4-39P01824 125 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 CD7P09564 240 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 CFC1BP0CG36 223 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 CFC1P0CG37 223 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 PPDPFQ9H3Y8 114 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 RIF1Q5UIP0 2472 aaKnown RBP8.41□□□□□ -1.06
SNX20-201ENST00000300590 IGLV11-55A0A075B6I3 123 aa8.41□□□□□ -1.06
SNX20-201ENST00000300590 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms