RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 USF3Q68DE3 2245 aa13□□□□□ -0.33
SNAPC4-201ENST00000298532 NBASA2RRP1 2371 aa13□□□□□ -0.33
SNAPC4-201ENST00000298532 G3V318 75 aa13□□□□□ -0.33
SNAPC4-201ENST00000298532 SRSF2Q01130 221 aaKnown RBP13□□□□□ -0.33
SNAPC4-201ENST00000298532 NDUFA4O00483 81 aa12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 C11orf44Q8N8P7 122 aa12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 FGF23Q9GZV9 251 aaPredicted RBP12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 SYNJ2BPP57105 145 aa12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 PCNX2A6NKB5 2137 aa12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 CHD3Q12873 2000 aaKnown RBP12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 KLK9Q9UKQ9 250 aa12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 MSMBP08118 114 aa12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 INS-IGF2F8WCM5 200 aa12.98□□□□□ -0.33
SNAPC4-201ENST00000298532 C8orf31Q8N9H6 132 aa12.98□□□□□ -0.33
SNAPC4-201ENST00000298532 HIGD1BQ9P298 99 aa12.98□□□□□ -0.33
SNAPC4-201ENST00000298532 SS18L2Q9UHA2 77 aa12.98□□□□□ -0.33
SNAPC4-201ENST00000298532 C11orf53Q8IXP5 236 aa12.98□□□□□ -0.33
SNAPC4-201ENST00000298532 BPESC1Q9GZL8 116 aa12.98□□□□□ -0.33
SNAPC4-201ENST00000298532 GP9P14770 177 aa12.97□□□□□ -0.33
SNAPC4-201ENST00000298532 TRAV13-2A0A0B4J235 113 aa12.97□□□□□ -0.33
SNAPC4-201ENST00000298532 RNF114Q9Y508 228 aa12.97□□□□□ -0.33
SNAPC4-201ENST00000298532 DYNAPQ8N1N2 210 aa12.97□□□□□ -0.33
SNAPC4-201ENST00000298532 KRTAP27-1Q3LI81 207 aa12.97□□□□□ -0.33
SNAPC4-201ENST00000298532 IGHV1-69DA0A0B4J2H0 117 aa12.96□□□□□ -0.33
SNAPC4-201ENST00000298532 RBAKDNA6NC62 111 aa12.96□□□□□ -0.33
SNAPC4-201ENST00000298532 FAM215AQ9Y5M1 114 aa12.96□□□□□ -0.33
SNAPC4-201ENST00000298532 FXYD2P54710 66 aa12.96□□□□□ -0.33
SNAPC4-201ENST00000298532 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.33
SNAPC4-201ENST00000298532 C11orf1Q9H5F2 150 aa12.96□□□□□ -0.33
SNAPC4-201ENST00000298532 LENEPQ9Y5L5 61 aa12.96□□□□□ -0.34
SNAPC4-201ENST00000298532 PFN2P35080 140 aa12.96□□□□□ -0.34
SNAPC4-201ENST00000298532 WFDC2Q14508 124 aa12.96□□□□□ -0.34
SNAPC4-201ENST00000298532 TEN1Q86WV5 123 aa12.96□□□□□ -0.34
SNAPC4-201ENST00000298532 RNF138Q8WVD3 245 aa12.96□□□□□ -0.34
SNAPC4-201ENST00000298532 RHOHQ15669 191 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 KAAG1Q9UBP8 84 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 CRYBA4P53673 196 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 CFHR4Q92496 578 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 MRPL53Q96EL3 112 aaKnown RBP12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 RNF223E7ERA6 249 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 ACYP1P07311 99 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 GATA1P15976 413 aaPredicted RBP12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 PATE2Q6UY27 113 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 HERVK_113P63121 156 aa12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 TMEM126AQ9H061 195 aa12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 FAM167A-AS1Q96KT0 104 aa12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 Q96MF0 132 aa12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 IGHV3-16A0A0C4DH30 117 aa12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 RPL35AP18077 110 aaKnown RBP12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 GTSF1Q8WW33 167 aa12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 G3V4G9 280 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 HAMPP81172 84 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 ZFHX2Q9C0A1 2572 aaPredicted RBP12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 SPRY4Q9C004 299 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 MALRD1Q5VYJ5 2156 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 WT1P19544 449 aaPredicted RBP12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 C3orf56Q8N813 242 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 KLHL30-AS1Q8NEE0 82 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 ZNRF2Q8NHG8 242 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 F8WEM9 126 aa12.92□□□□□ -0.34
SNAPC4-201ENST00000298532 TRAV12-2A0A075B6T6 113 aa12.92□□□□□ -0.34
SNAPC4-201ENST00000298532 TMEM243Q9BU79 118 aa12.92□□□□□ -0.34
SNAPC4-201ENST00000298532 FRMD6-AS1P0C7T7 363 aa12.92□□□□□ -0.34
SNAPC4-201ENST00000298532 FOXE3Q13461 319 aa12.91□□□□□ -0.34
SNAPC4-201ENST00000298532 XCL2Q9UBD3 114 aa12.91□□□□□ -0.34
SNAPC4-201ENST00000298532 IGHV3-38A0A0C4DH36 116 aa12.91□□□□□ -0.34
SNAPC4-201ENST00000298532 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.91□□□□□ -0.342e-7■■■■■ 28.4
SNAPC4-201ENST00000298532 EML6Q6ZMW3 1958 aa12.91□□□□□ -0.34
SNAPC4-201ENST00000298532 RUSC1-AS1Q66K80 236 aa12.91□□□□□ -0.34
SNAPC4-201ENST00000298532 NSUN5P1Q3KNT7 163 aa12.9□□□□□ -0.34
SNAPC4-201ENST00000298532 SMIM20Q8N5G0 67 aa12.9□□□□□ -0.34
SNAPC4-201ENST00000298532 RPL32P62910 135 aaKnown RBP12.9□□□□□ -0.34
SNAPC4-201ENST00000298532 IGHV1-69P01742 117 aa12.9□□□□□ -0.34
SNAPC4-201ENST00000298532 FOXI1Q12951 378 aa12.9□□□□□ -0.34
SNAPC4-201ENST00000298532 ABCA4P78363 2273 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 CR1LQ2VPA4 569 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 PCNX1Q96RV3 2341 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 BAALC-AS2P0C853 105 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 DEFB130BP0DP73 79 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 DEFB130AP0DP74 79 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 DENND4AQ7Z401 1863 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 IGKV1-17P01599 117 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 MSRB1Q9NZV6 116 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 IGHV7-4-1A0A0J9YVY3 117 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 PRSS47A8MTI9 375 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 CRLF1O75462 422 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 TTTY13Q9BZ97 58 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 PRORYQ9H606 182 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 C2orf70A6NJV1 201 aa12.88□□□□□ -0.35
SNAPC4-201ENST00000298532 C22orf46C9J442 243 aa12.88□□□□□ -0.35
SNAPC4-201ENST00000298532 KMT2EQ8IZD2 1858 aa12.88□□□□□ -0.35
SNAPC4-201ENST00000298532 GNRH2O43555 120 aa12.88□□□□□ -0.35
SNAPC4-201ENST00000298532 TRAV12-1A0A0B4J245 112 aa12.88□□□□□ -0.35
SNAPC4-201ENST00000298532 I3L2K1 104 aa12.88□□□□□ -0.35
SNAPC4-201ENST00000298532 A4D1N5 150 aa12.87□□□□□ -0.35
SNAPC4-201ENST00000298532 RBMY1FQ15415 496 aaKnown RBP12.87□□□□□ -0.35
SNAPC4-201ENST00000298532 TINCRA0A1B0GVN0 87 aa12.87□□□□□ -0.35
SNAPC4-201ENST00000298532 IGLV2-14P01704 120 aa12.87□□□□□ -0.35
SNAPC4-201ENST00000298532 LINC01620Q4KN68 170 aa12.87□□□□□ -0.35
SNAPC4-201ENST00000298532 RNASE13Q5GAN3 156 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms