RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 POLQO75417 2590 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 WI2-2373I1.2A0A1W2PRP0 233 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 C9JAW5 83 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 DLX6P56179 175 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 CR1LQ2VPA4 569 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 PRADC1Q9BSG0 188 aa11.6□□□□□ -0.55
SPIDR-201ENST00000297423 XGP55808 180 aa11.59□□□□□ -0.55
SPIDR-201ENST00000297423 ATMQ13315 3056 aa11.59□□□□□ -0.55
SPIDR-201ENST00000297423 ZFYVE26Q68DK2 2539 aa11.59□□□□□ -0.55
SPIDR-201ENST00000297423 IGHV1-3A0A0C4DH29 117 aa11.59□□□□□ -0.55
SPIDR-201ENST00000297423 GAGE2BQ13066 116 aa11.59□□□□□ -0.55
SPIDR-201ENST00000297423 GAGE2EQ4V326 116 aa11.59□□□□□ -0.55
SPIDR-201ENST00000297423 GAGE2DQ9UEU5 116 aa11.59□□□□□ -0.55
SPIDR-201ENST00000297423 C17orf100A8MU93 164 aa11.59□□□□□ -0.55
SPIDR-201ENST00000297423 HHLA3Q9XRX5 114 aa11.59□□□□□ -0.55
SPIDR-201ENST00000297423 THBDP07204 575 aa11.58□□□□□ -0.56
SPIDR-201ENST00000297423 SRSF1Q07955 248 aaKnown RBP eCLIP11.58□□□□□ -0.56
SPIDR-201ENST00000297423 MYMXA0A1B0GTQ4 84 aa11.58□□□□□ -0.56
SPIDR-201ENST00000297423 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-201ENST00000297423 ADIPOQQ15848 244 aa11.58□□□□□ -0.56
SPIDR-201ENST00000297423 C1QTNF4Q9BXJ3 329 aa11.58□□□□□ -0.56
SPIDR-201ENST00000297423 C21orf62Q9NYP8 219 aa11.58□□□□□ -0.56
SPIDR-201ENST00000297423 PKD1L2Q7Z442 2459 aa11.57□□□□□ -0.56
SPIDR-201ENST00000297423 TMEM155Q4W5P6 130 aa11.57□□□□□ -0.56
SPIDR-201ENST00000297423 LYRM7Q5U5X0 104 aa11.57□□□□□ -0.56
SPIDR-201ENST00000297423 Q6ZUT4 128 aa11.57□□□□□ -0.56
SPIDR-201ENST00000297423 C14orf178Q8N769 122 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-201ENST00000297423 PRAC2D3DTV9 90 aa11.57□□□□□ -0.56
SPIDR-201ENST00000297423 LINC01548A6NM66 108 aa11.57□□□□□ -0.56
SPIDR-201ENST00000297423 H3BRN7 92 aa11.57□□□□□ -0.56
SPIDR-201ENST00000297423 H7C1H1 209 aa11.56□□□□□ -0.56
SPIDR-201ENST00000297423 LY6HO94772 140 aa11.56□□□□□ -0.56
SPIDR-201ENST00000297423 SMPXQ9UHP9 88 aa11.56□□□□□ -0.56
SPIDR-201ENST00000297423 TRAV2A0A0B4J234 112 aa11.56□□□□□ -0.56
SPIDR-201ENST00000297423 DYNAPQ8N1N2 210 aa11.56□□□□□ -0.56
SPIDR-201ENST00000297423 CFHR4Q92496 578 aa11.56□□□□□ -0.56
SPIDR-201ENST00000297423 HIGD1BQ9P298 99 aa11.56□□□□□ -0.56
SPIDR-201ENST00000297423 NPC2P61916 151 aa11.56□□□□□ -0.56
SPIDR-201ENST00000297423 SPATA25Q9BR10 227 aa11.56□□□□□ -0.56
SPIDR-201ENST00000297423 CTSZQ9UBR2 303 aa11.56□□□□□ -0.56
SPIDR-201ENST00000297423 KLRD1Q13241 179 aa11.55□□□□□ -0.56
SPIDR-201ENST00000297423 PHLDA3Q9Y5J5 127 aa11.55□□□□□ -0.56
SPIDR-201ENST00000297423 NDPQ00604 133 aa11.55□□□□□ -0.56
SPIDR-201ENST00000297423 Q8N8P6 123 aa11.55□□□□□ -0.56
SPIDR-201ENST00000297423 TM2D2Q9BX73 214 aa11.55□□□□□ -0.56
SPIDR-201ENST00000297423 TMEM14CQ9P0S9 112 aa11.55□□□□□ -0.56
SPIDR-201ENST00000297423 FAM74A4Q5TZK3 123 aa11.55□□□□□ -0.56
SPIDR-201ENST00000297423 PVRIGQ6DKI7 326 aa11.55□□□□□ -0.56
SPIDR-201ENST00000297423 SVIPQ8NHG7 77 aa11.55□□□□□ -0.56
SPIDR-201ENST00000297423 PPDPFLQ8WWR9 84 aa11.55□□□□□ -0.56
SPIDR-201ENST00000297423 ZNF493Q6ZR52 646 aa11.54□□□□□ -0.56
SPIDR-201ENST00000297423 PRORYQ9H606 182 aa11.54□□□□□ -0.56
SPIDR-201ENST00000297423 DOPEY1Q5JWR5 2465 aa11.54□□□□□ -0.56
SPIDR-201ENST00000297423 CRYGCP07315 174 aa11.54□□□□□ -0.56
SPIDR-201ENST00000297423 HERVK_113P61574 105 aa11.54□□□□□ -0.56
SPIDR-201ENST00000297423 A0A087WX48 190 aa11.54□□□□□ -0.56
SPIDR-201ENST00000297423 B9A039 149 aa11.54□□□□□ -0.56
SPIDR-201ENST00000297423 PLNP26678 52 aa11.54□□□□□ -0.56
SPIDR-201ENST00000297423 LOXP28300 417 aaPredicted RBP11.54□□□□□ -0.56
SPIDR-201ENST00000297423 GATA4P43694 442 aa11.54□□□□□ -0.56
SPIDR-201ENST00000297423 Q6ZQT7 251 aa11.54□□□□□ -0.56
SPIDR-201ENST00000297423 NFE4Q86UQ8 179 aa11.54□□□□□ -0.56
SPIDR-201ENST00000297423 PLEKHB2Q96CS7 222 aa11.54□□□□□ -0.56
SPIDR-201ENST00000297423 I3L2K1 104 aa11.53□□□□□ -0.56
SPIDR-201ENST00000297423 K7EIM0 57 aa11.53□□□□□ -0.56
SPIDR-201ENST00000297423 FN1P02751 2386 aaKnown RBP11.53□□□□□ -0.56
SPIDR-201ENST00000297423 E7EQL1 145 aa11.53□□□□□ -0.56
SPIDR-201ENST00000297423 TMEM178BH3BS89 294 aa11.53□□□□□ -0.56
SPIDR-201ENST00000297423 F8VRH5 84 aa11.53□□□□□ -0.56
SPIDR-201ENST00000297423 GAGE5Q13069 117 aa11.53□□□□□ -0.56
SPIDR-201ENST00000297423 GAGE6Q13070 117 aa11.53□□□□□ -0.56
SPIDR-201ENST00000297423 TCTEX1D4Q5JR98 221 aa11.53□□□□□ -0.56
SPIDR-201ENST00000297423 GRNP28799 593 aaKnown RBP11.52□□□□□ -0.56
SPIDR-201ENST00000297423 PHLDA1Q8WV24 401 aaPredicted RBP11.52□□□□□ -0.56
SPIDR-201ENST00000297423 C16orf92Q96LL3 132 aa11.52□□□□□ -0.56
SPIDR-201ENST00000297423 IGHV3OR16-10A0A075B7F0 116 aa11.52□□□□□ -0.57
SPIDR-201ENST00000297423 HERV-K104P63124 156 aa11.52□□□□□ -0.57
SPIDR-201ENST00000297423 RPL39LQ96EH5 51 aaKnown RBP11.52□□□□□ -0.57
SPIDR-201ENST00000297423 DEFB1P60022 68 aa11.52□□□□□ -0.57
SPIDR-201ENST00000297423 TMEM30BQ3MIR4 351 aa11.52□□□□□ -0.57
SPIDR-201ENST00000297423 ANKRD29Q8N6D5 301 aa11.52□□□□□ -0.57
SPIDR-201ENST00000297423 ZNF256Q9Y2P7 627 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-201ENST00000297423 TEX22C9J3V5 150 aa11.52□□□□□ -0.57
SPIDR-201ENST00000297423 LYPD1Q8N2G4 141 aa11.52□□□□□ -0.57
SPIDR-201ENST00000297423 RNF185Q96GF1 192 aa11.52□□□□□ -0.57
SPIDR-201ENST00000297423 LINC00527Q9UJ94 153 aa11.52□□□□□ -0.57
SPIDR-201ENST00000297423 LGALS3P17931 250 aaKnown RBP11.51□□□□□ -0.57
SPIDR-201ENST00000297423 ADORA2A-AS1P86434 159 aa11.51□□□□□ -0.57
SPIDR-201ENST00000297423 CLEC19AQ6UXS0 136 aa11.51□□□□□ -0.57
SPIDR-201ENST00000297423 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
SPIDR-201ENST00000297423 LGALS1P09382 135 aaKnown RBP11.51□□□□□ -0.57
SPIDR-201ENST00000297423 ZNF688P0C7X2 276 aa11.51□□□□□ -0.57
SPIDR-201ENST00000297423 C2orf66Q6UXQ4 117 aa11.51□□□□□ -0.57
SPIDR-201ENST00000297423 BUB1B-PAK6H3BSN5 160 aa11.51□□□□□ -0.57
SPIDR-201ENST00000297423 TEX36Q5VZQ5 186 aa11.51□□□□□ -0.57
SPIDR-201ENST00000297423 NTN5Q8WTR8 489 aaPredicted RBP11.51□□□□□ -0.57
SPIDR-201ENST00000297423 RAB1BQ9H0U4 201 aa11.51□□□□□ -0.57
SPIDR-201ENST00000297423 SHISA9B4DS77 424 aa11.5□□□□□ -0.57
SPIDR-201ENST00000297423 TCL1BO95988 128 aa11.5□□□□□ -0.57
SPIDR-201ENST00000297423 NBR2O15453 112 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms