RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 GFRA4Q9GZZ7 299 aa10.63□□□□□ -0.71
HPS3-201ENST00000296051 GTSF1Q8WW33 167 aa10.63□□□□□ -0.71
HPS3-201ENST00000296051 C1QTNF4Q9BXJ3 329 aa10.63□□□□□ -0.71
HPS3-201ENST00000296051 GATA1P15976 413 aaPredicted RBP10.62□□□□□ -0.71
HPS3-201ENST00000296051 HIST2H2BCQ6DN03 193 aa10.62□□□□□ -0.71
HPS3-201ENST00000296051 FAM167A-AS1Q96KT0 104 aa10.62□□□□□ -0.71
HPS3-201ENST00000296051 MRPL35Q9NZE8 188 aaKnown RBP10.62□□□□□ -0.71
HPS3-201ENST00000296051 K7EP34 96 aa10.62□□□□□ -0.71
HPS3-201ENST00000296051 CT83Q5H943 113 aa10.62□□□□□ -0.71
HPS3-201ENST00000296051 A0A1W2PPM0 123 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 SPRY4Q9C004 299 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 A8MWV9 139 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 NDUFB8O95169 186 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 DNAL4O96015 105 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 MALP21145 153 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 Q8NA96 180 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 PSCAO43653 123 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 SH2D6Q7Z4S9 175 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 ZNF503Q96F45 646 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 TRGV11A0A075B6L2 103 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 TEX48A0A1B0GUV7 120 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 RITA1Q96K30 269 aa10.61□□□□□ -0.71
HPS3-201ENST00000296051 FAM223BA6NKX1 122 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 LINC01619G3V211 115 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 SPINK8P0C7L1 97 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 IGLC1P0CG04 106 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 AZU1P20160 251 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 ZNF833PQ6ZTB9 187 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 FAM223AQ8IWN6 122 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 IGF2BP2-AS1Q96M15 143 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 MSRB1Q9NZV6 116 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 ORMDL2Q53FV1 153 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 GDF5OSQ5U4N7 250 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 TMEM238C9JI98 176 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 TMEM95Q3KNT9 176 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 DTX2Q86UW9 622 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 TCTEX1D4Q5JR98 221 aa10.6□□□□□ -0.71
HPS3-201ENST00000296051 KLF5Q13887 457 aaPredicted RBP10.59□□□□□ -0.71
HPS3-201ENST00000296051 C9orf139Q6ZV77 190 aa10.59□□□□□ -0.71
HPS3-201ENST00000296051 NEGR1Q7Z3B1 354 aa10.59□□□□□ -0.71
HPS3-201ENST00000296051 C2orf70A6NJV1 201 aa10.59□□□□□ -0.71
HPS3-201ENST00000296051 SMPXQ9UHP9 88 aa10.59□□□□□ -0.71
HPS3-201ENST00000296051 TMEM131Q92545 1883 aa10.59□□□□□ -0.71
HPS3-201ENST00000296051 CFAP161Q6P656 301 aa10.59□□□□□ -0.71
HPS3-201ENST00000296051 PRR25Q96S07 402 aa10.59□□□□□ -0.71
HPS3-201ENST00000296051 LINC01549A6NIU2 74 aa10.58□□□□□ -0.72
HPS3-201ENST00000296051 TSPAN13O95857 204 aa10.58□□□□□ -0.72
HPS3-201ENST00000296051 POU2AF1Q16633 256 aa10.58□□□□□ -0.72
HPS3-201ENST00000296051 WIPF2Q8TF74 440 aaPredicted RBP10.58□□□□□ -0.72
HPS3-201ENST00000296051 CFAP54Q96N23 3096 aa10.58□□□□□ -0.72
HPS3-201ENST00000296051 P0C879 139 aa10.58□□□□□ -0.72
HPS3-201ENST00000296051 LGALS9BQ3B8N2 356 aa10.58□□□□□ -0.72
HPS3-201ENST00000296051 LGALS9CQ6DKI2 356 aa10.58□□□□□ -0.72
HPS3-201ENST00000296051 LINC00322Q6ZN03 302 aaPredicted RBP10.58□□□□□ -0.72
HPS3-201ENST00000296051 LTAP01374 205 aa10.58□□□□□ -0.72
HPS3-201ENST00000296051 A0A087WWL8 130 aa10.58□□□□□ -0.72
HPS3-201ENST00000296051 VCX2Q9H322 139 aa10.58□□□□□ -0.72
HPS3-201ENST00000296051 DAZAP2Q15038 168 aaPredicted RBP10.57□□□□□ -0.72
HPS3-201ENST00000296051 MSMPQ1L6U9 139 aa10.57□□□□□ -0.72
HPS3-201ENST00000296051 DLX4Q92988 240 aaPredicted RBP10.57□□□□□ -0.72
HPS3-201ENST00000296051 PRADC1Q9BSG0 188 aa10.57□□□□□ -0.72
HPS3-201ENST00000296051 CTSZQ9UBR2 303 aa10.57□□□□□ -0.72
HPS3-201ENST00000296051 LYPD1Q8N2G4 141 aa10.57□□□□□ -0.72
HPS3-201ENST00000296051 SRSF8Q9BRL6 282 aaKnown RBP10.57□□□□□ -0.72
HPS3-201ENST00000296051 IGHV4-38-2P0DP08 117 aa10.57□□□□□ -0.72
HPS3-201ENST00000296051 C1orf229Q6ZS94 237 aaPredicted RBP10.57□□□□□ -0.72
HPS3-201ENST00000296051 CSTL1Q9H114 145 aa10.57□□□□□ -0.72
HPS3-201ENST00000296051 F5H768 121 aa10.57□□□□□ -0.72
HPS3-201ENST00000296051 IGLV2-8P01709 118 aa10.57□□□□□ -0.72
HPS3-201ENST00000296051 TEX36Q5VZQ5 186 aa10.57□□□□□ -0.72
HPS3-201ENST00000296051 VPREB3Q9UKI3 123 aa10.57□□□□□ -0.72
HPS3-201ENST00000296051 LAMA1P25391 3075 aa10.56□□□□□ -0.72
HPS3-201ENST00000296051 GAGE12HA6NDE8 117 aa10.56□□□□□ -0.72
HPS3-201ENST00000296051 SEM1Q6ZVN7 128 aa10.56□□□□□ -0.72
HPS3-201ENST00000296051 PRORYQ9H606 182 aa10.56□□□□□ -0.72
HPS3-201ENST00000296051 PRSS46E5RG02 174 aa10.56□□□□□ -0.72
HPS3-201ENST00000296051 INSP01308 110 aa10.56□□□□□ -0.72
HPS3-201ENST00000296051 EGR2P11161 476 aaPredicted RBP10.56□□□□□ -0.72
HPS3-201ENST00000296051 VPS13AQ96RL7 3174 aa10.56□□□□□ -0.72
HPS3-201ENST00000296051 LOXL1Q08397 574 aaPredicted RBP10.56□□□□□ -0.72
HPS3-201ENST00000296051 DEFB136Q30KP8 78 aa10.56□□□□□ -0.72
HPS3-201ENST00000296051 SCRT2Q9NQ03 307 aa10.56□□□□□ -0.72
HPS3-201ENST00000296051 GAGE2BQ13066 116 aa10.55□□□□□ -0.72
HPS3-201ENST00000296051 GAGE2EQ4V326 116 aa10.55□□□□□ -0.72
HPS3-201ENST00000296051 GAGE2DQ9UEU5 116 aa10.55□□□□□ -0.72
HPS3-201ENST00000296051 CFHR3Q02985 330 aa10.55□□□□□ -0.72
HPS3-201ENST00000296051 C10orf105Q8TEF2 133 aa10.55□□□□□ -0.72
HPS3-201ENST00000296051 C9JAW5 83 aa10.55□□□□□ -0.72
HPS3-201ENST00000296051 PLNP26678 52 aa10.55□□□□□ -0.72
HPS3-201ENST00000296051 ZNF491Q8N8L2 437 aa10.55□□□□□ -0.72
HPS3-201ENST00000296051 THAP8Q8NA92 274 aa10.55□□□□□ -0.72
HPS3-201ENST00000296051 ERG28Q9UKR5 140 aa10.55□□□□□ -0.72
HPS3-201ENST00000296051 FXYD2P54710 66 aa10.55□□□□□ -0.72
HPS3-201ENST00000296051 DSCAMO60469 2012 aa10.55□□□□□ -0.72
HPS3-201ENST00000296051 SPINK13Q1W4C9 94 aa10.54□□□□□ -0.72
HPS3-201ENST00000296051 KAAG1Q9UBP8 84 aa10.54□□□□□ -0.72
HPS3-201ENST00000296051 KNCNA6PVL3 124 aa10.54□□□□□ -0.72
HPS3-201ENST00000296051 LINC00310P59036 64 aa10.54□□□□□ -0.72
HPS3-201ENST00000296051 RPL36AP83881 106 aaKnown RBP10.54□□□□□ -0.72
HPS3-201ENST00000296051 WFDC2Q14508 124 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms