RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 DYNAPQ8N1N2 210 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 MYOZ3Q8TDC0 251 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 AJUBAQ96IF1 538 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 LINC00477Q96M19 166 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 ZNF580Q9UK33 172 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 DNHD1Q96M86 4753 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 ADGRG4Q8IZF6 3080 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 TRAV8-2A0A0B4J237 113 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 APELAP0DMC3 54 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 SAMD13Q5VXD3 122 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 EEF1AKMT3Q96AZ1 226 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 TOMM6Q96B49 74 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 MEGF9Q9H1U4 602 aa4.73□□□□□ -1.65
VCAM1-201ENST00000294728 IGHV1-69DA0A0B4J2H0 117 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 H7C1H1 209 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 TMEM11P17152 192 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 ATP6V0E2Q8NHE4 81 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 MCRIP2Q9BUT9 160 aaKnown RBP4.72□□□□□ -1.65
VCAM1-201ENST00000294728 CELSR1Q9NYQ6 3014 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 TRBV7-3A0A075B6L6 115 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 F8VRH5 84 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 NDUFS8O00217 210 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 ORM1P02763 201 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 TMEM78Q5T7P6 136 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 TMEM158Q8WZ71 300 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 TPPP3Q9BW30 176 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 AGPAT4-IT1Q9H0P7 198 aa4.72□□□□□ -1.65
VCAM1-201ENST00000294728 CHTOPQ9Y3Y2 248 aaKnown RBP4.72□□□□□ -1.65
VCAM1-201ENST00000294728 H0Y8G0 127 aa4.71□□□□□ -1.65
VCAM1-201ENST00000294728 OVOL1O14753 267 aa4.71□□□□□ -1.65
VCAM1-201ENST00000294728 CLEC3BP05452 202 aa4.71□□□□□ -1.65
VCAM1-201ENST00000294728 ERCC8Q13216 396 aa4.71□□□□□ -1.65
VCAM1-201ENST00000294728 PAPPA-AS1Q5QFB9 102 aa4.71□□□□□ -1.65
VCAM1-201ENST00000294728 SPATA3Q8NHX4 192 aa4.71□□□□□ -1.65
VCAM1-201ENST00000294728 METTL26Q96S19 204 aa4.71□□□□□ -1.65
VCAM1-201ENST00000294728 SMIM2Q9BVW6 85 aa4.71□□□□□ -1.65
VCAM1-201ENST00000294728 IGHV4OR15-8A0A075B7B6 117 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 A0A087WW49 117 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 IGKV2D-26A0A0A0MRZ7 120 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 J3QR89 54 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 M0QXV9 152 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 NMUP48645 174 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 RNF151Q2KHN1 245 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 NEXN-AS1Q8NBZ9 246 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 GLMPQ8WWB7 406 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 CCDC140Q96MF4 163 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 SPATA25Q9BR10 227 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 HILPDAQ9Y5L2 63 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 CSMD2Q7Z408 3487 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 IGLL5B9A064 214 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.71□□□□□ -1.66
VCAM1-201ENST00000294728 PRSS1P07477 247 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 FXYD2P54710 66 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 C15orf32Q32M92 178 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 MSRB1Q9NZV6 116 aa4.71□□□□□ -1.66
VCAM1-201ENST00000294728 NCBP2LA6PVI3 153 aaKnown RBP4.7□□□□□ -1.66
VCAM1-201ENST00000294728 SMKR1H3BMG3 65 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 SOCS3O14543 225 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 ZC2HC1BQ5TFG8 222 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 C8orf86Q6ZUL3 223 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 Q8TAT8 98 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 LINC01600Q96MT4 127 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 C11orf21Q9P2W6 132 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 TMSB15BA0A087X1C1 80 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 PRAC2D3DTV9 90 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 HES1Q14469 280 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 RNF152Q8N8N0 203 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 ODF3Q96PU9 254 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 VCX2Q9H322 139 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 DPH3P1Q9H4G8 78 aa4.7□□□□□ -1.66
VCAM1-201ENST00000294728 TRAV21A0A0B4J279 112 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 MYMXA0A1B0GTQ4 84 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 TMEM238C9JI98 176 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 LYNX1G3V0Z9 82 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 NDUFA4O00483 81 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 SAP30O75446 220 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 IGF1P05019 195 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 LYNX1P0DP58 116 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 DLX1P56177 255 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 RRN3P1Q2M238 152 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 C12orf74Q32Q52 190 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 PRR31Q5SQ13 230 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 SPANXB1Q9NS25 103 aaPredicted RBP4.69□□□□□ -1.66
VCAM1-201ENST00000294728 MRPL35Q9NZE8 188 aaKnown RBP4.69□□□□□ -1.66
VCAM1-201ENST00000294728 PRO0461Q9UI25 63 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 TMEM238LA0A1B0GVL6 79 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 A6NJY4 79 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 CD300EQ496F6 205 aaPredicted RBP4.69□□□□□ -1.66
VCAM1-201ENST00000294728 C5orf56Q8N8D9 126 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 USMG5Q96IX5 58 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 SETD2Q9BYW2 2564 aaPredicted RBP4.69□□□□□ -1.66
VCAM1-201ENST00000294728 RNF223E7ERA6 249 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 SUMO2P61956 95 aaKnown RBP4.69□□□□□ -1.66
VCAM1-201ENST00000294728 KLRD1Q13241 179 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 ZFAND2AQ8N6M9 145 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 TMEM141Q96I45 108 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 SH3BGRL2Q9UJC5 107 aa4.69□□□□□ -1.66
VCAM1-201ENST00000294728 POLQO75417 2590 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 ABCA2Q9BZC7 2435 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 TRBV6-5A0A0K0K1A5 114 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms