RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 PAGE4O60829 102 aa17.65■□□□□ 0.42
PDF-201ENST00000288022 TDRG1Q3Y452 100 aa17.65■□□□□ 0.42
PDF-201ENST00000288022 POM121L12Q8N7R1 296 aa17.65■□□□□ 0.42
PDF-201ENST00000288022 SDF2L1Q9HCN8 221 aa17.65■□□□□ 0.42
PDF-201ENST00000288022 GNRH2O43555 120 aa17.64■□□□□ 0.41
PDF-201ENST00000288022 HOXA5P20719 270 aa17.64■□□□□ 0.41
PDF-201ENST00000288022 ZNF80P51504 273 aaPredicted RBP17.64■□□□□ 0.41
PDF-201ENST00000288022 LGALS9BQ3B8N2 356 aa17.64■□□□□ 0.41
PDF-201ENST00000288022 KCNS1Q96KK3 526 aa17.64■□□□□ 0.41
PDF-201ENST00000288022 ARL2-SNX15V9GYD0 113 aa17.64■□□□□ 0.41
PDF-201ENST00000288022 RAB5CP51148 216 aa17.63■□□□□ 0.41
PDF-201ENST00000288022 Q86TA4 180 aa17.63■□□□□ 0.41
PDF-201ENST00000288022 SLC51BQ86UW2 128 aa17.63■□□□□ 0.41
PDF-201ENST00000288022 TRAV26-1A0A087WT03 109 aa17.62■□□□□ 0.41
PDF-201ENST00000288022 A0A0J9YY99 117 aa17.62■□□□□ 0.41
PDF-201ENST00000288022 PFN1P07737 140 aaKnown RBP17.62■□□□□ 0.41
PDF-201ENST00000288022 UBE2G1P62253 170 aa17.62■□□□□ 0.41
PDF-201ENST00000288022 C18orf15Q96N68 181 aa17.62■□□□□ 0.41
PDF-201ENST00000288022 TCEAL7Q9BRU2 100 aa17.62■□□□□ 0.41
PDF-201ENST00000288022 SPXQ9BT56 116 aa17.62■□□□□ 0.41
PDF-201ENST00000288022 TYMSP04818 313 aa17.61■□□□□ 0.41
PDF-201ENST00000288022 IGHV3-16A0A0C4DH30 117 aa17.6■□□□□ 0.41
PDF-201ENST00000288022 A0A1B0GVG6 124 aa17.6■□□□□ 0.41
PDF-201ENST00000288022 IGHV3-53P01767 116 aa17.6■□□□□ 0.41
PDF-201ENST00000288022 AKR1C3P42330 323 aa17.6■□□□□ 0.41
PDF-201ENST00000288022 C9orf62Q8N4C0 152 aa17.6■□□□□ 0.41
PDF-201ENST00000288022 FMC1Q96HJ9 113 aa17.6■□□□□ 0.41
PDF-201ENST00000288022 SULT1A2P50226 295 aa17.59■□□□□ 0.41
PDF-201ENST00000288022 C11orf21Q9P2W6 132 aa17.59■□□□□ 0.41
PDF-201ENST00000288022 RNF212Q495C1 297 aa17.58■□□□□ 0.4
PDF-201ENST00000288022 TEX46H3BTG2 121 aa17.57■□□□□ 0.4
PDF-201ENST00000288022 ZFP30Q9Y2G7 519 aa17.57■□□□□ 0.4
PDF-201ENST00000288022 GNG13Q9P2W3 67 aa17.56■□□□□ 0.4
PDF-201ENST00000288022 FABP5P3A8MUU1 101 aa17.55■□□□□ 0.4
PDF-201ENST00000288022 M0R2P5 195 aa17.55■□□□□ 0.4
PDF-201ENST00000288022 CCL20P78556 96 aa17.55■□□□□ 0.4
PDF-201ENST00000288022 RASL10AQ92737 203 aa17.55■□□□□ 0.4
PDF-201ENST00000288022 MANBALQ9NQG1 85 aa17.55■□□□□ 0.4
PDF-201ENST00000288022 TRAV1-1A0A0B4J248 108 aa17.54■□□□□ 0.4
PDF-201ENST00000288022 SCO2A0A1W2PP80 73 aa17.54■□□□□ 0.4
PDF-201ENST00000288022 ZC2HC1AQ96GY0 325 aa17.54■□□□□ 0.4
PDF-201ENST00000288022 TRBV6-1A0A0K0K1D8 114 aa17.53■□□□□ 0.4
PDF-201ENST00000288022 H3BNG1 76 aa17.53■□□□□ 0.4
PDF-201ENST00000288022 CCL18P55774 89 aa17.53■□□□□ 0.4
PDF-201ENST00000288022 VPS13DQ5THJ4 4388 aa17.53■□□□□ 0.4
PDF-201ENST00000288022 TRGV4A0A0C4DH28 118 aa17.52■□□□□ 0.4
PDF-201ENST00000288022 LTAP01374 205 aa17.52■□□□□ 0.4
PDF-201ENST00000288022 SFTA3P0C7M3 94 aa17.52■□□□□ 0.4
PDF-201ENST00000288022 IGLV2-18A0A075B6J9 118 aa17.51■□□□□ 0.39
PDF-201ENST00000288022 C9JCJ5 164 aa17.51■□□□□ 0.39
PDF-201ENST00000288022 M0R2N4 97 aa17.51■□□□□ 0.39
PDF-201ENST00000288022 PAX4O43316 350 aa17.51■□□□□ 0.39
PDF-201ENST00000288022 ORM1P02763 201 aa17.51■□□□□ 0.39
PDF-201ENST00000288022 S100A9P06702 114 aaKnown RBP17.51■□□□□ 0.39
PDF-201ENST00000288022 VSIG2Q96IQ7 327 aa17.51■□□□□ 0.39
PDF-201ENST00000288022 ZNF479Q96JC4 524 aa17.51■□□□□ 0.39
PDF-201ENST00000288022 S100A4P26447 101 aaKnown RBP17.5■□□□□ 0.39
PDF-201ENST00000288022 NKX2-5P52952 324 aaPredicted RBP17.5■□□□□ 0.39
PDF-201ENST00000288022 SLAQ13239 276 aa17.5■□□□□ 0.39
PDF-201ENST00000288022 FHL2Q14192 279 aa17.5■□□□□ 0.39
PDF-201ENST00000288022 FAM162BQ5T6X4 162 aa17.5■□□□□ 0.39
PDF-201ENST00000288022 NHLRC2Q8NBF2 726 aa17.5■□□□□ 0.39
PDF-201ENST00000288022 OR4C5Q8NGB2 326 aa17.5■□□□□ 0.39
PDF-201ENST00000288022 PRO0255Q9UI72 69 aa17.5■□□□□ 0.39
PDF-201ENST00000288022 HHLA3Q9XRX5 114 aa17.5■□□□□ 0.39
PDF-201ENST00000288022 IGKV3D-20A0A0C4DH25 116 aa17.49■□□□□ 0.39
PDF-201ENST00000288022 B4DEV8 164 aa17.49■□□□□ 0.39
PDF-201ENST00000288022 SH2D1AO60880 128 aa17.49■□□□□ 0.39
PDF-201ENST00000288022 CRIP1P50238 77 aa17.49■□□□□ 0.39
PDF-201ENST00000288022 FAM3BP58499 235 aaPredicted RBP17.49■□□□□ 0.39
PDF-201ENST00000288022 ZNF876PQ49A33 203 aa17.49■□□□□ 0.39
PDF-201ENST00000288022 COX8CQ7Z4L0 72 aa17.49■□□□□ 0.39
PDF-201ENST00000288022 TRAV4A0A0B4J268 109 aa17.48■□□□□ 0.39
PDF-201ENST00000288022 M0R036 132 aa17.48■□□□□ 0.39
PDF-201ENST00000288022 IFNA1P01562 189 aa17.48■□□□□ 0.39
PDF-201ENST00000288022 ASIPP42127 132 aa17.48■□□□□ 0.39
PDF-201ENST00000288022 C9orf85Q96MD7 179 aa17.48■□□□□ 0.39
PDF-201ENST00000288022 LINC00588Q9Y4M8 146 aa17.48■□□□□ 0.39
PDF-201ENST00000288022 MUC4Q99102 2169 aa17.47■□□□□ 0.39
PDF-201ENST00000288022 KMT2AQ03164 3969 aa17.47■□□□□ 0.39
PDF-201ENST00000288022 CRYBA4P53673 196 aa17.47■□□□□ 0.39
PDF-201ENST00000288022 ALKAL2Q6UX46 152 aa17.47■□□□□ 0.39
PDF-201ENST00000288022 A0A096LPF7 62 aa17.46■□□□□ 0.39
PDF-201ENST00000288022 RNASE3P12724 160 aaKnown RBP17.46■□□□□ 0.39
PDF-201ENST00000288022 ZNF674Q2M3X9 581 aa17.46■□□□□ 0.39
PDF-201ENST00000288022 BAGE2Q86Y30 109 aa17.46■□□□□ 0.39
PDF-201ENST00000288022 ICOSQ9Y6W8 199 aa17.46■□□□□ 0.39
PDF-201ENST00000288022 NACAE9PAV3 2078 aa17.45■□□□□ 0.38
PDF-201ENST00000288022 TXNDC17Q9BRA2 123 aa17.45■□□□□ 0.38
PDF-201ENST00000288022 KRBOX1C9JBD0 128 aa17.44■□□□□ 0.38
PDF-201ENST00000288022 TMSB15BA0A087X1C1 80 aa17.43■□□□□ 0.38
PDF-201ENST00000288022 GRIFINA4D1Z8 144 aa17.43■□□□□ 0.38
PDF-201ENST00000288022 PGPEP1LA6NFU8 196 aa17.43■□□□□ 0.38
PDF-201ENST00000288022 RPL35P42766 123 aaKnown RBP17.43■□□□□ 0.38
PDF-201ENST00000288022 MEF2BQ02080 365 aaPredicted RBP17.43■□□□□ 0.38
PDF-201ENST00000288022 ESRGQ1W209 222 aa17.43■□□□□ 0.38
PDF-201ENST00000288022 ZNF506Q5JVG8 444 aa17.43■□□□□ 0.38
PDF-201ENST00000288022 ZNRF2Q8NHG8 242 aa17.43■□□□□ 0.38
PDF-201ENST00000288022 C11orf52Q96A22 123 aa17.43■□□□□ 0.38
PDF-201ENST00000288022 H3BVH4 76 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms