RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 CIDEAO60543 219 aa10.43□□□□□ -0.74
SCAF4-201ENST00000286835 SRD5A1P18405 259 aa10.43□□□□□ -0.74
SCAF4-201ENST00000286835 TMEM170BQ5T4T1 132 aa10.43□□□□□ -0.74
SCAF4-201ENST00000286835 CHTOPQ9Y3Y2 248 aaKnown RBP10.43□□□□□ -0.74
SCAF4-201ENST00000286835 ZNF815PA8K554 130 aa10.42□□□□□ -0.74
SCAF4-201ENST00000286835 G3V4G9 280 aa10.42□□□□□ -0.74
SCAF4-201ENST00000286835 NEGR1Q7Z3B1 354 aa10.42□□□□□ -0.74
SCAF4-201ENST00000286835 RNF5Q99942 180 aa10.42□□□□□ -0.74
SCAF4-201ENST00000286835 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.42□□□□□ -0.74
SCAF4-201ENST00000286835 OR10J6PQ8NGY7 276 aa10.42□□□□□ -0.74
SCAF4-201ENST00000286835 RNASE4P34096 147 aaKnown RBP10.42□□□□□ -0.74
SCAF4-201ENST00000286835 ADORA2A-AS1P86434 159 aa10.41□□□□□ -0.74
SCAF4-201ENST00000286835 ODF1Q14990 250 aa10.41□□□□□ -0.74
SCAF4-201ENST00000286835 MRGPRG-AS1Q2M3A8 158 aa10.41□□□□□ -0.74
SCAF4-201ENST00000286835 CEND1Q8N111 149 aa10.41□□□□□ -0.74
SCAF4-201ENST00000286835 FANCD2OSQ96PS1 177 aa10.41□□□□□ -0.74
SCAF4-201ENST00000286835 CRYGBP07316 175 aa10.41□□□□□ -0.74
SCAF4-201ENST00000286835 FGF6P10767 208 aa10.41□□□□□ -0.74
SCAF4-201ENST00000286835 ZNF493Q6ZR52 646 aa10.41□□□□□ -0.74
SCAF4-201ENST00000286835 DPF1Q92782 380 aa10.41□□□□□ -0.74
SCAF4-201ENST00000286835 PGPEP1Q9NXJ5 209 aa10.41□□□□□ -0.74
SCAF4-201ENST00000286835 HOXA3O43365 443 aaPredicted RBP10.4□□□□□ -0.74
SCAF4-201ENST00000286835 AGPAT4-IT1Q9H0P7 198 aa10.4□□□□□ -0.74
SCAF4-201ENST00000286835 SIVA1O15304 175 aa10.4□□□□□ -0.74
SCAF4-201ENST00000286835 CTSGP08311 255 aa10.4□□□□□ -0.74
SCAF4-201ENST00000286835 DEFB1P60022 68 aa10.4□□□□□ -0.74
SCAF4-201ENST00000286835 Q8N8P6 123 aa10.4□□□□□ -0.74
SCAF4-201ENST00000286835 EEF1AKMT3Q96AZ1 226 aa10.4□□□□□ -0.74
SCAF4-201ENST00000286835 ATMQ13315 3056 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 WI2-2373I1.2A0A1W2PRP0 233 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 ATP6V0E1O15342 81 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 ATP5G2Q06055 141 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 DUX5Q96PT3 197 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 SMPXQ9UHP9 88 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 NACAE9PAV3 2078 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 IGLV11-55A0A075B6I3 123 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 SLC50A1Q9BRV3 221 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 BEX4Q9NWD9 120 aaPredicted RBP10.39□□□□□ -0.75
SCAF4-201ENST00000286835 IGHV3-64A0A075B6Q5 118 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 TMEM238LA0A1B0GVL6 79 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 A6NJY4 79 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 HERVK_113P61574 105 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 C12orf74Q32Q52 190 aa10.39□□□□□ -0.75
SCAF4-201ENST00000286835 A0A1B0GV72 72 aa10.38□□□□□ -0.75
SCAF4-201ENST00000286835 RAB9AP51151 201 aa10.38□□□□□ -0.75
SCAF4-201ENST00000286835 SRSF8Q9BRL6 282 aaKnown RBP10.38□□□□□ -0.75
SCAF4-201ENST00000286835 ZNF256Q9Y2P7 627 aaPredicted RBP10.38□□□□□ -0.75
SCAF4-201ENST00000286835 GAGE12HA6NDE8 117 aa10.38□□□□□ -0.75
SCAF4-201ENST00000286835 ASIPP42127 132 aa10.38□□□□□ -0.75
SCAF4-201ENST00000286835 H7C1H1 209 aa10.37□□□□□ -0.75
SCAF4-201ENST00000286835 PRTN3P24158 256 aa10.37□□□□□ -0.75
SCAF4-201ENST00000286835 IGLL5B9A064 214 aa10.37□□□□□ -0.75
SCAF4-201ENST00000286835 LINC01549A6NIU2 74 aa10.36□□□□□ -0.75
SCAF4-201ENST00000286835 Q6ZQT7 251 aa10.36□□□□□ -0.75
SCAF4-201ENST00000286835 MAPKAPK5-AS1Q8N8E1 139 aa10.36□□□□□ -0.75
SCAF4-201ENST00000286835 PLNP26678 52 aa10.36□□□□□ -0.75
SCAF4-201ENST00000286835 C8orf86Q6ZUL3 223 aa10.36□□□□□ -0.75
SCAF4-201ENST00000286835 SLC25A16P16260 332 aa10.36□□□□□ -0.75
SCAF4-201ENST00000286835 NRGNQ92686 78 aa10.36□□□□□ -0.75
SCAF4-201ENST00000286835 ACANP16112 2415 aa10.36□□□□□ -0.75
SCAF4-201ENST00000286835 NDUFS8O00217 210 aa10.36□□□□□ -0.75
SCAF4-201ENST00000286835 RPL39LQ96EH5 51 aaKnown RBP10.36□□□□□ -0.75
SCAF4-201ENST00000286835 TRBV6-1A0A0K0K1D8 114 aa10.35□□□□□ -0.75
SCAF4-201ENST00000286835 UFSP1Q6NVU6 142 aa10.35□□□□□ -0.75
SCAF4-201ENST00000286835 MAP1AP78559 2803 aaPredicted RBP10.35□□□□□ -0.75
SCAF4-201ENST00000286835 PRSS2P07478 247 aa10.35□□□□□ -0.75
SCAF4-201ENST00000286835 HLA-DRB4P13762 266 aa10.35□□□□□ -0.75
SCAF4-201ENST00000286835 ORMDL2Q53FV1 153 aa10.35□□□□□ -0.75
SCAF4-201ENST00000286835 PSMG4Q5JS54 123 aa10.35□□□□□ -0.75
SCAF4-201ENST00000286835 C2orf66Q6UXQ4 117 aa10.35□□□□□ -0.75
SCAF4-201ENST00000286835 RNF185Q96GF1 192 aa10.35□□□□□ -0.75
SCAF4-201ENST00000286835 HLA-DRB4X5D2U9 266 aa10.35□□□□□ -0.75
SCAF4-201ENST00000286835 F6UB75 175 aa10.35□□□□□ -0.75
SCAF4-201ENST00000286835 PRADC1Q9BSG0 188 aa10.35□□□□□ -0.75
SCAF4-201ENST00000286835 IGKV3D-20A0A0C4DH25 116 aa10.34□□□□□ -0.75
SCAF4-201ENST00000286835 PIP4P2Q8N4L2 257 aa10.34□□□□□ -0.75
SCAF4-201ENST00000286835 KLHL30-AS1Q8NEE0 82 aa10.34□□□□□ -0.75
SCAF4-201ENST00000286835 SMAD5-AS1Q9Y6J3 95 aa10.34□□□□□ -0.75
SCAF4-201ENST00000286835 A0A087WWL8 130 aa10.34□□□□□ -0.75
SCAF4-201ENST00000286835 IGHV7-81A0A0B4J1V7 117 aa10.34□□□□□ -0.75
SCAF4-201ENST00000286835 IGLC6P0CF74 106 aa10.34□□□□□ -0.75
SCAF4-201ENST00000286835 SUMO2P61956 95 aaKnown RBP10.34□□□□□ -0.75
SCAF4-201ENST00000286835 A0A087WX48 190 aa10.34□□□□□ -0.75
SCAF4-201ENST00000286835 F8VRH5 84 aa10.34□□□□□ -0.75
SCAF4-201ENST00000286835 PAX8Q06710 450 aa10.34□□□□□ -0.75
SCAF4-201ENST00000286835 SAA4P35542 130 aa10.33□□□□□ -0.76
SCAF4-201ENST00000286835 FOXI2Q6ZQN5 318 aa10.33□□□□□ -0.76
SCAF4-201ENST00000286835 SMIM2Q9BVW6 85 aa10.33□□□□□ -0.76
SCAF4-201ENST00000286835 MYMXA0A1B0GTQ4 84 aa10.33□□□□□ -0.76
SCAF4-201ENST00000286835 PRRC2AP48634 2157 aaKnown RBP10.33□□□□□ -0.76
SCAF4-201ENST00000286835 CKS1BP61024 79 aa10.33□□□□□ -0.76
SCAF4-201ENST00000286835 ZNF56Q15929 161 aa10.33□□□□□ -0.76
SCAF4-201ENST00000286835 FAM159AQ6UWV7 190 aa10.33□□□□□ -0.76
SCAF4-201ENST00000286835 KIR2DL4Q99706 377 aa10.33□□□□□ -0.76
SCAF4-201ENST00000286835 BUB3O43684 328 aa10.33□□□□□ -0.76
SCAF4-201ENST00000286835 U3KQK5 164 aa10.33□□□□□ -0.76
SCAF4-201ENST00000286835 TNRC18O15417 2968 aaPredicted RBP10.33□□□□□ -0.76
SCAF4-201ENST00000286835 RNF223E7ERA6 249 aa10.33□□□□□ -0.76
SCAF4-201ENST00000286835 F8W1H4 67 aa10.33□□□□□ -0.76
SCAF4-201ENST00000286835 LYRM7Q5U5X0 104 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms