RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 APOC3P02656 99 aa15.76■□□□□ 0.11
PDLIM3-203ENST00000284771 ORM1P02763 201 aa15.76■□□□□ 0.11
PDLIM3-203ENST00000284771 AZU1P20160 251 aa15.76■□□□□ 0.11
PDLIM3-203ENST00000284771 ERVFC1-1P60608 527 aa15.76■□□□□ 0.11
PDLIM3-203ENST00000284771 TMEM256Q8N2U0 113 aa15.76■□□□□ 0.11
PDLIM3-203ENST00000284771 PYGO2Q9BRQ0 406 aa15.76■□□□□ 0.11
PDLIM3-203ENST00000284771 ZNF705GA8MUZ8 300 aaPredicted RBP15.76■□□□□ 0.11
PDLIM3-203ENST00000284771 GNRH2O43555 120 aa15.76■□□□□ 0.11
PDLIM3-203ENST00000284771 LINC01559Q495D7 138 aa15.76■□□□□ 0.11
PDLIM3-203ENST00000284771 FAM159AQ6UWV7 190 aa15.76■□□□□ 0.11
PDLIM3-203ENST00000284771 DAZAP1Q96EP5 407 aaKnown RBP15.76■□□□□ 0.11
PDLIM3-203ENST00000284771 SFRP2Q96HF1 295 aa15.76■□□□□ 0.11
PDLIM3-203ENST00000284771 HUWE1Q7Z6Z7 4374 aaKnown RBP15.75■□□□□ 0.11
PDLIM3-203ENST00000284771 TMSB15BA0A087X1C1 80 aa15.75■□□□□ 0.11
PDLIM3-203ENST00000284771 SPRY2O43597 315 aa15.75■□□□□ 0.11
PDLIM3-203ENST00000284771 TM2D3Q9BRN9 247 aa15.75■□□□□ 0.11
PDLIM3-203ENST00000284771 P01737 135 aa15.74■□□□□ 0.11
PDLIM3-203ENST00000284771 OR11H2Q8NH07 326 aa15.74■□□□□ 0.11
PDLIM3-203ENST00000284771 LINC00467Q9BRT7 94 aa15.74■□□□□ 0.11
PDLIM3-203ENST00000284771 OSTCQ9NRP0 149 aa15.74■□□□□ 0.11
PDLIM3-203ENST00000284771 B4DEV8 164 aa15.73■□□□□ 0.11
PDLIM3-203ENST00000284771 TYMSP04818 313 aa15.73■□□□□ 0.11
PDLIM3-203ENST00000284771 B9D2Q9BPU9 175 aa15.73■□□□□ 0.11
PDLIM3-203ENST00000284771 TP53TG1Q9Y2A0 90 aa15.73■□□□□ 0.11
PDLIM3-203ENST00000284771 V9GYV3 84 aa15.73■□□□□ 0.11
PDLIM3-203ENST00000284771 GRIFINA4D1Z8 144 aa15.72■□□□□ 0.11
PDLIM3-203ENST00000284771 TMEM189A5PLL7 270 aa15.72■□□□□ 0.11
PDLIM3-203ENST00000284771 RNF212Q495C1 297 aa15.72■□□□□ 0.11
PDLIM3-203ENST00000284771 CLRN3Q8NCR9 226 aa15.72■□□□□ 0.11
PDLIM3-203ENST00000284771 OR2D3Q8NGH3 330 aa15.72■□□□□ 0.11
PDLIM3-203ENST00000284771 NEU1Q99519 415 aa15.72■□□□□ 0.11
PDLIM3-203ENST00000284771 MDFICQ9P1T7 246 aa15.72■□□□□ 0.11
PDLIM3-203ENST00000284771 CBY3A6NI87 242 aa15.71■□□□□ 0.11
PDLIM3-203ENST00000284771 GZMBP10144 247 aa15.71■□□□□ 0.11
PDLIM3-203ENST00000284771 OR10G8Q8NGN5 311 aa15.71■□□□□ 0.11
PDLIM3-203ENST00000284771 KCNS1Q96KK3 526 aa15.71■□□□□ 0.11
PDLIM3-203ENST00000284771 RPP21Q9H633 154 aaKnown RBP15.71■□□□□ 0.11
PDLIM3-203ENST00000284771 COL7A1Q02388 2944 aa15.71■□□□□ 0.11
PDLIM3-203ENST00000284771 GATCO43716 136 aaKnown RBP15.7■□□□□ 0.1
PDLIM3-203ENST00000284771 C11orf72Q8NBR9 251 aa15.7■□□□□ 0.1
PDLIM3-203ENST00000284771 RNASE8Q8TDE3 154 aaKnown RBP15.7■□□□□ 0.1
PDLIM3-203ENST00000284771 PLAC8L1A1L4L8 177 aa15.7■□□□□ 0.1
PDLIM3-203ENST00000284771 RRN3P1Q2M238 152 aa15.7■□□□□ 0.1
PDLIM3-203ENST00000284771 FBN3Q75N90 2809 aa15.69■□□□□ 0.1
PDLIM3-203ENST00000284771 IGHV3-16A0A0C4DH30 117 aa15.69■□□□□ 0.1
PDLIM3-203ENST00000284771 ATP6V1G1O75348 118 aa15.69■□□□□ 0.1
PDLIM3-203ENST00000284771 RNASE3P12724 160 aaKnown RBP15.69■□□□□ 0.1
PDLIM3-203ENST00000284771 SVBPQ8N300 66 aa15.69■□□□□ 0.1
PDLIM3-203ENST00000284771 C15orf54Q8N8G6 183 aa15.69■□□□□ 0.1
PDLIM3-203ENST00000284771 C7orf77A4D0Y5 90 aa15.68■□□□□ 0.1
PDLIM3-203ENST00000284771 ATRAIDQ6UW56 229 aa15.68■□□□□ 0.1
PDLIM3-203ENST00000284771 Q8NAQ8 132 aa15.68■□□□□ 0.1
PDLIM3-203ENST00000284771 SPATA25Q9BR10 227 aa15.68■□□□□ 0.1
PDLIM3-203ENST00000284771 MUC4Q99102 2169 aa15.68■□□□□ 0.1
PDLIM3-203ENST00000284771 SMIM9A6NGZ8 99 aa15.67■□□□□ 0.1
PDLIM3-203ENST00000284771 TMEM263Q8WUH6 116 aaKnown RBP15.67■□□□□ 0.1
PDLIM3-203ENST00000284771 GTSF1Q8WW33 167 aa15.67■□□□□ 0.1
PDLIM3-203ENST00000284771 GSN-AS1Q9NRJ2 163 aa15.67■□□□□ 0.1
PDLIM3-203ENST00000284771 DEFB4AO15263 64 aa15.67■□□□□ 0.1
PDLIM3-203ENST00000284771 DNLZQ5SXM8 178 aa15.67■□□□□ 0.1
PDLIM3-203ENST00000284771 IGHV4-28A0A0C4DH34 117 aa15.66■□□□□ 0.1
PDLIM3-203ENST00000284771 MT-ND4LP03901 98 aa15.66■□□□□ 0.1
PDLIM3-203ENST00000284771 CT83Q5H943 113 aa15.66■□□□□ 0.1
PDLIM3-203ENST00000284771 TRGV11A0A075B6L2 103 aa15.65■□□□□ 0.1
PDLIM3-203ENST00000284771 SNAPINO95295 136 aa15.65■□□□□ 0.1
PDLIM3-203ENST00000284771 MIFP14174 115 aa15.65■□□□□ 0.1
PDLIM3-203ENST00000284771 ANAPC16Q96DE5 110 aa15.65■□□□□ 0.1
PDLIM3-203ENST00000284771 ARMS2P0C7Q2 107 aa15.64■□□□□ 0.09
PDLIM3-203ENST00000284771 IGLC6P0CF74 106 aa15.64■□□□□ 0.09
PDLIM3-203ENST00000284771 ASIPP42127 132 aa15.64■□□□□ 0.09
PDLIM3-203ENST00000284771 ZNF493Q6ZR52 646 aa15.64■□□□□ 0.09
PDLIM3-203ENST00000284771 TSKUQ8WUA8 353 aa15.64■□□□□ 0.09
PDLIM3-203ENST00000284771 C16orf74Q96GX8 76 aa15.64■□□□□ 0.09
PDLIM3-203ENST00000284771 A8MWL6 223 aa15.63■□□□□ 0.09
PDLIM3-203ENST00000284771 H3BVH4 76 aa15.63■□□□□ 0.09
PDLIM3-203ENST00000284771 CXCL1P09341 107 aa15.63■□□□□ 0.09
PDLIM3-203ENST00000284771 RPS20P60866 119 aaKnown RBP15.63■□□□□ 0.09
PDLIM3-203ENST00000284771 RHEBQ15382 184 aa15.63■□□□□ 0.09
PDLIM3-203ENST00000284771 IL17DQ8TAD2 202 aa15.63■□□□□ 0.09
PDLIM3-203ENST00000284771 C9orf85Q96MD7 179 aa15.63■□□□□ 0.09
PDLIM3-203ENST00000284771 SSBP4Q9BWG4 385 aaPredicted RBP15.63■□□□□ 0.09
PDLIM3-203ENST00000284771 RPS10P5Q9NQ39 176 aa15.63■□□□□ 0.09
PDLIM3-203ENST00000284771 TCL1AP56279 114 aa15.63■□□□□ 0.09
PDLIM3-203ENST00000284771 SCRT2Q9NQ03 307 aa15.63■□□□□ 0.09
PDLIM3-203ENST00000284771 IL36BQ9NZH7 164 aa15.63■□□□□ 0.09
PDLIM3-203ENST00000284771 PPP1R2P9O14990 202 aa15.62■□□□□ 0.09
PDLIM3-203ENST00000284771 S100A4P26447 101 aaKnown RBP15.62■□□□□ 0.09
PDLIM3-203ENST00000284771 EMP1P54849 157 aa15.62■□□□□ 0.09
PDLIM3-203ENST00000284771 FOXA3P55318 350 aaPredicted RBP15.62■□□□□ 0.09
PDLIM3-203ENST00000284771 ZMAT4Q9H898 229 aa15.62■□□□□ 0.09
PDLIM3-203ENST00000284771 TIMM8BQ9Y5J9 83 aaPredicted RBP15.62■□□□□ 0.09
PDLIM3-203ENST00000284771 A0A087WWC5 75 aa15.61■□□□□ 0.09
PDLIM3-203ENST00000284771 MUC21A0A0G2JKD1 596 aa15.61■□□□□ 0.09
PDLIM3-203ENST00000284771 MUC21A0A140T8X8 626 aa15.61■□□□□ 0.09
PDLIM3-203ENST00000284771 SMIM27A0A1W2PRY6 76 aa15.61■□□□□ 0.09
PDLIM3-203ENST00000284771 XKRY2A2RUG3 117 aa15.61■□□□□ 0.09
PDLIM3-203ENST00000284771 SNAI2O43623 268 aa15.6■□□□□ 0.09
PDLIM3-203ENST00000284771 ZNF415Q09FC8 603 aa15.6■□□□□ 0.09
PDLIM3-203ENST00000284771 FER1L6-AS1Q8NA97 138 aa15.6■□□□□ 0.09
PDLIM3-203ENST00000284771 CTDSP1Q9GZU7 261 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms