RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 FAM231DQ6ZW35 169 aa9.82□□□□□ -0.84
ACER3-201ENST00000278544 NDUFA6P56556 154 aa9.81□□□□□ -0.84
ACER3-201ENST00000278544 FAM159AQ6UWV7 190 aa9.81□□□□□ -0.84
ACER3-201ENST00000278544 FER1L6-AS1Q8NA97 138 aa9.81□□□□□ -0.84
ACER3-201ENST00000278544 TMEM158Q8WZ71 300 aa9.81□□□□□ -0.84
ACER3-201ENST00000278544 BIN3Q9NQY0 253 aa9.81□□□□□ -0.84
ACER3-201ENST00000278544 TRBV24-1A0A075B6N3 115 aa9.81□□□□□ -0.84
ACER3-201ENST00000278544 NDUFS6O75380 124 aaKnown RBP9.81□□□□□ -0.84
ACER3-201ENST00000278544 MDFICQ9P1T7 246 aa9.81□□□□□ -0.84
ACER3-201ENST00000278544 TRGC1P0CF51 173 aa9.8□□□□□ -0.84
ACER3-201ENST00000278544 HLA-DRB4P13762 266 aa9.8□□□□□ -0.84
ACER3-201ENST00000278544 NTF3P20783 257 aa9.8□□□□□ -0.84
ACER3-201ENST00000278544 ZNF575Q86XF7 245 aa9.8□□□□□ -0.84
ACER3-201ENST00000278544 MRPL18Q9H0U6 180 aaKnown RBP9.8□□□□□ -0.84
ACER3-201ENST00000278544 HLA-DRB4X5D2U9 266 aa9.8□□□□□ -0.84
ACER3-201ENST00000278544 TRAV21A0A0B4J279 112 aa9.8□□□□□ -0.84
ACER3-201ENST00000278544 EMP1P54849 157 aa9.8□□□□□ -0.84
ACER3-201ENST00000278544 SLAQ13239 276 aa9.8□□□□□ -0.84
ACER3-201ENST00000278544 AMTNQ6UX39 209 aa9.79□□□□□ -0.84
ACER3-201ENST00000278544 LINC01587Q99440 93 aa9.79□□□□□ -0.84
ACER3-201ENST00000278544 MUC4Q99102 2169 aa9.79□□□□□ -0.84
ACER3-201ENST00000278544 C7orf71A4D174 169 aa9.79□□□□□ -0.84
ACER3-201ENST00000278544 JPT2Q9H910 190 aa9.79□□□□□ -0.84
ACER3-201ENST00000278544 CBY3A6NI87 242 aa9.79□□□□□ -0.84
ACER3-201ENST00000278544 SMKR1H3BMG3 65 aa9.79□□□□□ -0.84
ACER3-201ENST00000278544 S100A6P06703 90 aa9.78□□□□□ -0.84
ACER3-201ENST00000278544 SNRPEP62304 92 aaKnown RBP9.78□□□□□ -0.84
ACER3-201ENST00000278544 SPANXN1Q5VSR9 72 aa9.78□□□□□ -0.84
ACER3-201ENST00000278544 DUSP14O95147 198 aaKnown RBP9.78□□□□□ -0.84
ACER3-201ENST00000278544 C9orf66Q5T8R8 295 aa9.78□□□□□ -0.84
ACER3-201ENST00000278544 GTSCR1Q86UQ5 136 aa9.78□□□□□ -0.84
ACER3-201ENST00000278544 Q8N1Y9 231 aa9.78□□□□□ -0.84
ACER3-201ENST00000278544 SMIM12Q96EX1 92 aa9.78□□□□□ -0.84
ACER3-201ENST00000278544 TRBV6-1A0A0K0K1D8 114 aa9.78□□□□□ -0.84
ACER3-201ENST00000278544 A0A1B0GUT8 65 aa9.78□□□□□ -0.84
ACER3-201ENST00000278544 F2Z2F3 143 aa9.78□□□□□ -0.84
ACER3-201ENST00000278544 RAB5BP61020 215 aa9.78□□□□□ -0.84
ACER3-201ENST00000278544 XKRY2A2RUG3 117 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 G3V4G9 280 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 CRXO43186 299 aaPredicted RBP9.77□□□□□ -0.84
ACER3-201ENST00000278544 HIST1H2BKO60814 126 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 NCR2O95944 276 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 HIST1H2BJP06899 126 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 EVI2AP22794 236 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 HIST1H2BOP23527 126 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 HIST1H2BBP33778 126 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 HIST1H2BDP58876 126 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 HIST1H2BCP62807 126 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 HIST2H2BEQ16778 126 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.77□□□□□ -0.84
ACER3-201ENST00000278544 HIST1H2BHQ93079 126 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 HIST1H2BNQ99877 126 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 HIST1H2BMQ99879 126 aa9.77□□□□□ -0.84
ACER3-201ENST00000278544 SAMD13Q5VXD3 122 aa9.77□□□□□ -0.85
ACER3-201ENST00000278544 AMN1Q8IY45 258 aa9.77□□□□□ -0.85
ACER3-201ENST00000278544 PHLDA3Q9Y5J5 127 aa9.77□□□□□ -0.85
ACER3-201ENST00000278544 IGHV3-73A0A0B4J1V6 119 aa9.77□□□□□ -0.85
ACER3-201ENST00000278544 KLLNB2CW77 178 aa9.77□□□□□ -0.85
ACER3-201ENST00000278544 TYMSP04818 313 aa9.77□□□□□ -0.85
ACER3-201ENST00000278544 FAM74A4Q5TZK3 123 aa9.77□□□□□ -0.85
ACER3-201ENST00000278544 BORCS7Q96B45 105 aa9.77□□□□□ -0.85
ACER3-201ENST00000278544 ZNF747Q9BV97 191 aa9.77□□□□□ -0.85
ACER3-201ENST00000278544 GAS8-AS1O95177 125 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 IQCJQ1A5X6 159 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 TMEM136Q6ZRR5 245 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 PYGO2Q9BRQ0 406 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 TRAV26-2A0A0B4J265 109 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 DEFB4AO15263 64 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 AZU1P20160 251 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 LEPP41159 167 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 HBBP68871 147 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 DMRTA1Q5VZB9 504 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 TRAV25A0A0B4J276 109 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 TSPOP30536 169 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 SRIP30626 198 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 ARL6IP6Q8N6S5 226 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 SIGLEC8Q9NYZ4 499 aa9.76□□□□□ -0.85
ACER3-201ENST00000278544 ANK2Q01484 3957 aa9.75□□□□□ -0.85
ACER3-201ENST00000278544 A0A087WWL8 130 aa9.75□□□□□ -0.85
ACER3-201ENST00000278544 FBLL1A6NHQ2 334 aaKnown RBP9.75□□□□□ -0.85
ACER3-201ENST00000278544 ZNF324O75467 553 aaPredicted RBP9.75□□□□□ -0.85
ACER3-201ENST00000278544 AKR1D1P51857 326 aa9.75□□□□□ -0.85
ACER3-201ENST00000278544 SHISA2Q6UWI4 295 aa9.75□□□□□ -0.85
ACER3-201ENST00000278544 FAM19A4Q96LR4 140 aa9.75□□□□□ -0.85
ACER3-201ENST00000278544 GSN-AS1Q9NRJ2 163 aa9.75□□□□□ -0.85
ACER3-201ENST00000278544 C19orf73Q9NVV2 129 aa9.75□□□□□ -0.85
ACER3-201ENST00000278544 APCSP02743 223 aa9.75□□□□□ -0.85
ACER3-201ENST00000278544 GATA1P15976 413 aaPredicted RBP9.75□□□□□ -0.85
ACER3-201ENST00000278544 ASIPP42127 132 aa9.75□□□□□ -0.85
ACER3-201ENST00000278544 RIPPLY3P57055 190 aa9.75□□□□□ -0.85
ACER3-201ENST00000278544 LINC01559Q495D7 138 aa9.75□□□□□ -0.85
ACER3-201ENST00000278544 TENM3Q9P273 2699 aa9.75□□□□□ -0.85
ACER3-201ENST00000278544 CRISP2P16562 243 aa9.74□□□□□ -0.85
ACER3-201ENST00000278544 C14orf178Q8N769 122 aaPredicted RBP9.74□□□□□ -0.85
ACER3-201ENST00000278544 BEAN1Q3B7T3 259 aa9.74□□□□□ -0.85
ACER3-201ENST00000278544 LOC389332A0A1B0GUA5 103 aa9.74□□□□□ -0.85
ACER3-201ENST00000278544 MGPP08493 103 aa9.74□□□□□ -0.85
ACER3-201ENST00000278544 IGHV1OR15-1A0A075B7D0 117 aa9.73□□□□□ -0.85
ACER3-201ENST00000278544 LENEPQ9Y5L5 61 aa9.73□□□□□ -0.85
ACER3-201ENST00000278544 RNASE3P12724 160 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms