RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 SFTA2Q6UW10 78 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 ZNF329Q86UD4 541 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 LYPD6BQ8NI32 183 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 NDUFA4L2Q9NRX3 87 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 ZNF256Q9Y2P7 627 aaPredicted RBP2.24□□□□□ -2.05
HERC4-201ENST00000277817 FAM215AQ9Y5M1 114 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 ASH1LQ9NR48 2969 aaKnown RBP2.24□□□□□ -2.05
HERC4-201ENST00000277817 TRAV40A0A0B4J280 105 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 IGKV3OR2-268A0A0C4DH90 116 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 G3V4G9 280 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.24□□□□□ -2.05
HERC4-201ENST00000277817 H3BUT2 72 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 K7EM74 188 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 ATP5LO75964 103 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 IGLV1-44P01699 117 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 PAX8Q06710 450 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 LY96Q9Y6Y9 160 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 IGLV3-9A0A075B6K5 115 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 A0A087WZ39 114 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 A8MWP6 167 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 GGTLC3B5MD39 225 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 TNFRSF13BO14836 293 aaPredicted RBP2.24□□□□□ -2.05
HERC4-201ENST00000277817 CRXO43186 299 aaPredicted RBP2.24□□□□□ -2.05
HERC4-201ENST00000277817 HBDP02042 147 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 TYMSP04818 313 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 CD7P09564 240 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 LGALS3P17931 250 aaKnown RBP2.24□□□□□ -2.05
HERC4-201ENST00000277817 ATP5L2Q7Z4Y8 100 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 IFI27L1Q96BM0 104 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 NAA38Q9BRA0 125 aaKnown RBP2.24□□□□□ -2.05
HERC4-201ENST00000277817 C2orf88Q9BSF0 95 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 TRAV41A0A0B4J266 112 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 A0A1W2PNU3 283 aaPredicted RBP2.24□□□□□ -2.05
HERC4-201ENST00000277817 PSMB11A5LHX3 300 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.24□□□□□ -2.05
HERC4-201ENST00000277817 SMKR1H3BMG3 65 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 SNCGO76070 127 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 APOMO95445 188 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 CEACAM8P31997 349 aaPredicted RBP2.24□□□□□ -2.05
HERC4-201ENST00000277817 EFNA4P52798 201 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 RIPPLY3P57055 190 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 RRN3P1Q2M238 152 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 TMEM155Q4W5P6 130 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 AMMECR1LQ6DCA0 310 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 AMN1Q8IY45 258 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 TTC9CQ8N5M4 171 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 CHCHD1Q96BP2 118 aaKnown RBP2.24□□□□□ -2.05
HERC4-201ENST00000277817 RNF5Q99942 180 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 SLC50A1Q9BRV3 221 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 ANKRD17O75179 2603 aaKnown RBP2.24□□□□□ -2.05
HERC4-201ENST00000277817 EXPH5Q8NEV8 1989 aa2.24□□□□□ -2.05
HERC4-201ENST00000277817 PRRC2CQ9Y520 2896 aaKnown RBP2.23□□□□□ -2.05
HERC4-201ENST00000277817 DYSFO75923 2080 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 IGLV5-52A0A0A0MRZ9 124 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 FNDC10F2Z333 226 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 CDK2AP2O75956 126 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 TOMM40O96008 361 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 NUTF2P61970 127 aaKnown RBP2.23□□□□□ -2.05
HERC4-201ENST00000277817 ERCC8Q13216 396 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 GUSBP1Q15486 140 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 KRTAP27-1Q3LI81 207 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 MPV17L2Q567V2 206 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 IGFL3Q6UXB1 125 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 ADAMTSL5Q6ZMM2 481 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 ZNF833PQ6ZTB9 187 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 ITLN2Q8WWU7 325 aaPredicted RBP2.23□□□□□ -2.05
HERC4-201ENST00000277817 SLC25A2Q9BXI2 301 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 HCFC1P51610 2035 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 F2Z2F3 143 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 K7EMT4 169 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 SH2D1AO60880 128 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 PPBPP02775 128 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 ARMS2P0C7Q2 107 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 PRTN3P24158 256 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 IFI27P40305 119 aaPredicted RBP2.23□□□□□ -2.05
HERC4-201ENST00000277817 SSBP2P81877 361 aaPredicted RBP2.23□□□□□ -2.05
HERC4-201ENST00000277817 GTSCR1Q86UQ5 136 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 SMIM12Q96EX1 92 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 DNHD1Q96M86 4753 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 DUX3Q96PT4 197 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 BPESC1Q9GZL8 116 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 MRPL16Q9NX20 251 aaKnown RBP2.23□□□□□ -2.05
HERC4-201ENST00000277817 NHP2Q9NX24 153 aaKnown RBP2.23□□□□□ -2.05
HERC4-201ENST00000277817 MSRB1Q9NZV6 116 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 USP24Q9UPU5 2620 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 SPCS1Q9Y6A9 102 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 V9GYV3 84 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 CFAP54Q96N23 3096 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 TEP1Q99973 2627 aaKnown RBP2.23□□□□□ -2.05
HERC4-201ENST00000277817 TRAV21A0A0B4J279 112 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 G3V318 75 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 SYS1-DBNDD2H3BUS1 97 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 H3BUX3 64 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 K7EN84 100 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 UBE2L6O14933 153 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 NDUFB8O95169 186 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 COX6CP09669 75 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 SAA4P35542 130 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 Q0VG73 95 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 RASL11AQ6T310 242 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms