RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ECSCRQ19T08 205 aa9.92□□□□□ -0.82
C9orf3-201ENST00000277198 OR4X2Q8NGF9 303 aa9.92□□□□□ -0.82
C9orf3-201ENST00000277198 METTL26Q96S19 204 aa9.92□□□□□ -0.82
C9orf3-201ENST00000277198 DNHD1Q96M86 4753 aa9.91□□□□□ -0.82
C9orf3-201ENST00000277198 CENPVL3A0A0U1RRI6 287 aa9.91□□□□□ -0.82
C9orf3-201ENST00000277198 PRB4P10163 310 aaPredicted RBP9.91□□□□□ -0.82
C9orf3-201ENST00000277198 ANKRD39Q53RE8 183 aa9.91□□□□□ -0.82
C9orf3-201ENST00000277198 CCDC140Q96MF4 163 aa9.91□□□□□ -0.82
C9orf3-201ENST00000277198 U3KQE9 123 aa9.91□□□□□ -0.82
C9orf3-201ENST00000277198 A6NDN8 102 aa9.9□□□□□ -0.82
C9orf3-201ENST00000277198 TNFRSF6BO95407 300 aa9.9□□□□□ -0.82
C9orf3-201ENST00000277198 TGFAP01135 160 aa9.9□□□□□ -0.82
C9orf3-201ENST00000277198 SAA4P35542 130 aa9.9□□□□□ -0.82
C9orf3-201ENST00000277198 HSD52Q0P140 79 aa9.9□□□□□ -0.82
C9orf3-201ENST00000277198 IGFL4Q6B9Z1 124 aa9.9□□□□□ -0.82
C9orf3-201ENST00000277198 C9orf47Q6ZRZ4 202 aa9.9□□□□□ -0.82
C9orf3-201ENST00000277198 SMPXQ9UHP9 88 aa9.9□□□□□ -0.82
C9orf3-201ENST00000277198 LENEPQ9Y5L5 61 aa9.9□□□□□ -0.82
C9orf3-201ENST00000277198 IGHV4-4A0A075B6R2 117 aa9.9□□□□□ -0.83
C9orf3-201ENST00000277198 PRAC2D3DTV9 90 aa9.9□□□□□ -0.83
C9orf3-201ENST00000277198 ERCC8Q13216 396 aa9.9□□□□□ -0.83
C9orf3-201ENST00000277198 TMEM78Q5T7P6 136 aa9.9□□□□□ -0.83
C9orf3-201ENST00000277198 SMIM15Q7Z3B0 74 aa9.9□□□□□ -0.83
C9orf3-201ENST00000277198 AGPAT4-IT1Q9H0P7 198 aa9.9□□□□□ -0.83
C9orf3-201ENST00000277198 ZMAT4Q9H898 229 aa9.9□□□□□ -0.83
C9orf3-201ENST00000277198 SMKR1H3BMG3 65 aa9.89□□□□□ -0.83
C9orf3-201ENST00000277198 CRIP2P52943 208 aaPredicted RBP9.89□□□□□ -0.83
C9orf3-201ENST00000277198 LMO4P61968 165 aa9.89□□□□□ -0.83
C9orf3-201ENST00000277198 CLEC19AQ6UXS0 136 aa9.89□□□□□ -0.83
C9orf3-201ENST00000277198 Q8N8P6 123 aa9.89□□□□□ -0.83
C9orf3-201ENST00000277198 MSRB1Q9NZV6 116 aa9.89□□□□□ -0.83
C9orf3-201ENST00000277198 IGKV3D-20A0A0C4DH25 116 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 C7orf71A4D174 169 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 FAM223BA6NKX1 122 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 H3BRM9 83 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 NPFFO15130 113 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 FAM223AQ8IWN6 122 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 C5orf56Q8N8D9 126 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 RNASE8Q8TDE3 154 aaKnown RBP9.88□□□□□ -0.83
C9orf3-201ENST00000277198 TRAV8-2A0A0B4J237 113 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 IGHV3-35A0A0C4DH35 117 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 ARHGAP32A7KAX9 2087 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 ATP5LO75964 103 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 LEPP41159 167 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 CDKN1BP46527 198 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 RBX1P62877 108 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 ATP5G2Q06055 141 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 AMMECR1LQ6DCA0 310 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 C8orf86Q6ZUL3 223 aa9.88□□□□□ -0.83
C9orf3-201ENST00000277198 COL6A5A8TX70 2615 aa9.87□□□□□ -0.83
C9orf3-201ENST00000277198 IGHV3OR16-8A0A075B7F1 116 aa9.87□□□□□ -0.83
C9orf3-201ENST00000277198 ADAMTSL5Q6ZMM2 481 aa9.87□□□□□ -0.83
C9orf3-201ENST00000277198 RNF182Q8N6D2 247 aa9.87□□□□□ -0.83
C9orf3-201ENST00000277198 LINC01356Q8N9X3 169 aa9.87□□□□□ -0.83
C9orf3-201ENST00000277198 CBY3A6NI87 242 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 G3V318 75 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 SNAI2O43623 268 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 BRI3O95415 125 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 C9orf139Q6ZV77 190 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 HIGD1BQ9P298 99 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 IGLV2-18A0A075B6J9 118 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 HLA-DRB4P13762 266 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 EVI2AP22794 236 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 KIR3DS1Q14943 382 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 ODF1Q14990 250 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 C19orf54Q5BKX5 351 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 OR2K2Q8NGT1 345 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 MDFIQ99750 246 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 MOB4Q9Y3A3 225 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 HLA-DRB4X5D2U9 266 aa9.86□□□□□ -0.83
C9orf3-201ENST00000277198 IGHV7-4-1A0A0J9YVY3 117 aa9.85□□□□□ -0.83
C9orf3-201ENST00000277198 C9orf118A6NHY6 69 aa9.85□□□□□ -0.83
C9orf3-201ENST00000277198 KRTAP21-3Q3LHN1 58 aa9.85□□□□□ -0.83
C9orf3-201ENST00000277198 GTF2H5Q6ZYL4 71 aa9.85□□□□□ -0.83
C9orf3-201ENST00000277198 HHLA3Q9XRX5 114 aa9.85□□□□□ -0.83
C9orf3-201ENST00000277198 WNK2Q9Y3S1 2297 aa9.85□□□□□ -0.83
C9orf3-201ENST00000277198 TRAV8-6A0A0B4J262 113 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 TRAV41A0A0B4J266 112 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 FXYD7P58549 80 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 LINC00477Q96M19 166 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 AP1S3Q96PC3 154 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 C11orf21Q9P2W6 132 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 DKK2Q9UBU2 259 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 B4DSR2 109 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 AVPP01185 164 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 IGKCP01834 107 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 PRSS1P07477 247 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 MSMBP08118 114 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 GLMPQ8WWB7 406 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 MRAP2Q96G30 205 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 CST9LQ9H4G1 147 aa9.84□□□□□ -0.83
C9orf3-201ENST00000277198 IGHV3-66A0A0C4DH42 116 aa9.83□□□□□ -0.84
C9orf3-201ENST00000277198 LINC01548A6NM66 108 aa9.83□□□□□ -0.84
C9orf3-201ENST00000277198 H3BUA1 57 aa9.83□□□□□ -0.84
C9orf3-201ENST00000277198 K7EMI3 77 aa9.83□□□□□ -0.84
C9orf3-201ENST00000277198 NMUP48645 174 aa9.83□□□□□ -0.84
C9orf3-201ENST00000277198 LAGE3Q14657 143 aa9.83□□□□□ -0.84
C9orf3-201ENST00000277198 NRACQ8N912 160 aa9.83□□□□□ -0.84
C9orf3-201ENST00000277198 TMEM158Q8WZ71 300 aa9.83□□□□□ -0.84
C9orf3-201ENST00000277198 C16orf92Q96LL3 132 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms