RNA–Protein interactions for RNA: ENST00000274963.12

FGD2-201, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD2, Length 3,046 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-201ENST00000274963 VAMP3Q15836 100 aa11.52□□□□□ -0.57
FGD2-201ENST00000274963 MRPS16Q9Y3D3 137 aaKnown RBP11.52□□□□□ -0.57
FGD2-201ENST00000274963 M0R381 172 aa11.51□□□□□ -0.57
FGD2-201ENST00000274963 LEPP41159 167 aa11.51□□□□□ -0.57
FGD2-201ENST00000274963 TNFRSF6BO95407 300 aa11.51□□□□□ -0.57
FGD2-201ENST00000274963 LINC01545Q5VT33 79 aa11.51□□□□□ -0.57
FGD2-201ENST00000274963 HBDP02042 147 aa11.5□□□□□ -0.57
FGD2-201ENST00000274963 GATD1Q8NB37 220 aa11.5□□□□□ -0.57
FGD2-201ENST00000274963 MAP1LC3AQ9H492 121 aa11.5□□□□□ -0.57
FGD2-201ENST00000274963 DKK2Q9UBU2 259 aa11.5□□□□□ -0.57
FGD2-201ENST00000274963 NOTCH3Q9UM47 2321 aa11.5□□□□□ -0.57
FGD2-201ENST00000274963 FAM223BA6NKX1 122 aa11.49□□□□□ -0.57
FGD2-201ENST00000274963 COX8CQ7Z4L0 72 aa11.49□□□□□ -0.57
FGD2-201ENST00000274963 FAM223AQ8IWN6 122 aa11.49□□□□□ -0.57
FGD2-201ENST00000274963 IFI27L1Q96BM0 104 aa11.49□□□□□ -0.57
FGD2-201ENST00000274963 U3KQK5 164 aa11.49□□□□□ -0.57
FGD2-201ENST00000274963 FBLL1A6NHQ2 334 aaKnown RBP11.49□□□□□ -0.57
FGD2-201ENST00000274963 IGHV4-59P01825 116 aa11.49□□□□□ -0.57
FGD2-201ENST00000274963 S100A4P26447 101 aaKnown RBP11.49□□□□□ -0.57
FGD2-201ENST00000274963 RNASE4P34096 147 aaKnown RBP11.49□□□□□ -0.57
FGD2-201ENST00000274963 LINC01559Q495D7 138 aa11.49□□□□□ -0.57
FGD2-201ENST00000274963 NPFFR1Q9GZQ6 430 aa11.49□□□□□ -0.57
FGD2-201ENST00000274963 IGKV3-20P01619 116 aa11.49□□□□□ -0.57
FGD2-201ENST00000274963 RHPN1-AS1Q9BWJ2 59 aa11.49□□□□□ -0.57
FGD2-201ENST00000274963 MEGF9Q9H1U4 602 aa11.49□□□□□ -0.57
FGD2-201ENST00000274963 SCRT2Q9NQ03 307 aa11.49□□□□□ -0.57
FGD2-201ENST00000274963 K7ERU9 68 aa11.48□□□□□ -0.57
FGD2-201ENST00000274963 PRSS1P07477 247 aa11.48□□□□□ -0.57
FGD2-201ENST00000274963 NMUP48645 174 aa11.48□□□□□ -0.57
FGD2-201ENST00000274963 Q5PR19 223 aa11.48□□□□□ -0.57
FGD2-201ENST00000274963 GPHB5Q86YW7 130 aa11.48□□□□□ -0.57
FGD2-201ENST00000274963 U3KQE9 123 aa11.48□□□□□ -0.57
FGD2-201ENST00000274963 TGFAP01135 160 aa11.47□□□□□ -0.57
FGD2-201ENST00000274963 IGHG2P01859 326 aa11.47□□□□□ -0.57
FGD2-201ENST00000274963 OR10J6PQ8NGY7 276 aa11.47□□□□□ -0.57
FGD2-201ENST00000274963 TMEM190Q8WZ59 177 aa11.47□□□□□ -0.57
FGD2-201ENST00000274963 DUX5Q96PT3 197 aa11.47□□□□□ -0.57
FGD2-201ENST00000274963 RBAKDNA6NC62 111 aa11.47□□□□□ -0.57
FGD2-201ENST00000274963 A6NDX4 124 aa11.47□□□□□ -0.57
FGD2-201ENST00000274963 RIPPLY3P57055 190 aa11.47□□□□□ -0.57
FGD2-201ENST00000274963 C19orf54Q5BKX5 351 aa11.46□□□□□ -0.57
FGD2-201ENST00000274963 GNRH2O43555 120 aa11.46□□□□□ -0.57
FGD2-201ENST00000274963 DEFB112Q30KQ8 113 aa11.46□□□□□ -0.57
FGD2-201ENST00000274963 TMEM158Q8WZ71 300 aa11.46□□□□□ -0.57
FGD2-201ENST00000274963 TTTY13Q9BZ97 58 aa11.46□□□□□ -0.57
FGD2-201ENST00000274963 IGHV7-4-1A0A0J9YVY3 117 aa11.46□□□□□ -0.58
FGD2-201ENST00000274963 B4DSR2 109 aa11.46□□□□□ -0.58
FGD2-201ENST00000274963 C9orf47Q6ZRZ4 202 aa11.46□□□□□ -0.58
FGD2-201ENST00000274963 NF1P21359 2839 aa11.45□□□□□ -0.58
FGD2-201ENST00000274963 NDUFA4O00483 81 aa11.45□□□□□ -0.58
FGD2-201ENST00000274963 HIST2H2BDQ6DRA6 164 aa11.45□□□□□ -0.58
FGD2-201ENST00000274963 C14orf178Q8N769 122 aaPredicted RBP11.45□□□□□ -0.58
FGD2-201ENST00000274963 C9orf139Q6ZV77 190 aa11.44□□□□□ -0.58
FGD2-201ENST00000274963 OR2K2Q8NGT1 345 aa11.44□□□□□ -0.58
FGD2-201ENST00000274963 BVES-AS1Q5T3Y7 98 aa11.44□□□□□ -0.58
FGD2-201ENST00000274963 PCP2Q8IVA1 136 aa11.44□□□□□ -0.58
FGD2-201ENST00000274963 WNK1Q9H4A3 2382 aa11.44□□□□□ -0.58
FGD2-201ENST00000274963 AGRNO00468 2067 aa11.44□□□□□ -0.58
FGD2-201ENST00000274963 C7orf71A4D174 169 aa11.44□□□□□ -0.58
FGD2-201ENST00000274963 MGPP08493 103 aa11.44□□□□□ -0.58
FGD2-201ENST00000274963 ANXA2RQ3ZCQ2 193 aa11.44□□□□□ -0.58
FGD2-201ENST00000274963 PSMG3-AS1Q96PY0 264 aa11.43□□□□□ -0.58
FGD2-201ENST00000274963 FOXC2Q99958 501 aa11.43□□□□□ -0.58
FGD2-201ENST00000274963 PHLDA3Q9Y5J5 127 aa11.43□□□□□ -0.58
FGD2-201ENST00000274963 KLK9Q2XQG4 91 aa11.43□□□□□ -0.58
FGD2-201ENST00000274963 USMG5Q96IX5 58 aa11.43□□□□□ -0.58
FGD2-201ENST00000274963 NAA38Q9BRA0 125 aaKnown RBP11.43□□□□□ -0.58
FGD2-201ENST00000274963 CNFNQ9BYD5 112 aa11.43□□□□□ -0.58
FGD2-201ENST00000274963 KLK9Q9UKQ9 250 aa11.43□□□□□ -0.58
FGD2-201ENST00000274963 COX8AP10176 69 aa11.42□□□□□ -0.58
FGD2-201ENST00000274963 ZFAND2AQ8N6M9 145 aa11.42□□□□□ -0.58
FGD2-201ENST00000274963 MS4A6AQ9H2W1 248 aa11.42□□□□□ -0.58
FGD2-201ENST00000274963 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
FGD2-201ENST00000274963 ZNF688P0C7X2 276 aa11.41□□□□□ -0.58
FGD2-201ENST00000274963 DAZ1Q9NQZ3 744 aaKnown RBP11.41□□□□□ -0.58
FGD2-201ENST00000274963 CFAP161Q6P656 301 aa11.41□□□□□ -0.58
FGD2-201ENST00000274963 TMEM160Q9NX00 188 aa11.41□□□□□ -0.58
FGD2-201ENST00000274963 A0A0G2JLM5 398 aa11.41□□□□□ -0.58
FGD2-201ENST00000274963 C2orf91Q6ZV80 131 aa11.41□□□□□ -0.58
FGD2-201ENST00000274963 RPL39LQ96EH5 51 aaKnown RBP11.41□□□□□ -0.58
FGD2-201ENST00000274963 PEF1Q9UBV8 284 aaKnown RBP11.41□□□□□ -0.58
FGD2-201ENST00000274963 ZNF469Q96JG9 3925 aaPredicted RBP11.41□□□□□ -0.58
FGD2-201ENST00000274963 SMIM17P0DL12 118 aa11.4□□□□□ -0.58
FGD2-201ENST00000274963 FCER1GP30273 86 aa11.4□□□□□ -0.58
FGD2-201ENST00000274963 LGALS9BQ3B8N2 356 aa11.4□□□□□ -0.58
FGD2-201ENST00000274963 LGALS9CQ6DKI2 356 aa11.4□□□□□ -0.58
FGD2-201ENST00000274963 NEGR1Q7Z3B1 354 aa11.4□□□□□ -0.58
FGD2-201ENST00000274963 LINC00477Q96M19 166 aa11.4□□□□□ -0.58
FGD2-201ENST00000274963 BBC3Q96PG8 261 aaPredicted RBP11.4□□□□□ -0.58
FGD2-201ENST00000274963 NXT2Q9NPJ8 142 aaKnown RBP11.4□□□□□ -0.58
FGD2-201ENST00000274963 TRAV21A0A0B4J279 112 aa11.4□□□□□ -0.58
FGD2-201ENST00000274963 SRSF2Q01130 221 aaKnown RBP11.4□□□□□ -0.58
FGD2-201ENST00000274963 C12orf54Q6X4T0 127 aa11.4□□□□□ -0.58
FGD2-201ENST00000274963 GTSCR1Q86UQ5 136 aa11.4□□□□□ -0.58
FGD2-201ENST00000274963 MRPL53Q96EL3 112 aaKnown RBP11.4□□□□□ -0.58
FGD2-201ENST00000274963 NBPF19A0A087WUL8 3843 aa11.39□□□□□ -0.59
FGD2-201ENST00000274963 PRRC2AP48634 2157 aaKnown RBP11.39□□□□□ -0.59
FGD2-201ENST00000274963 BEX4Q9NWD9 120 aaPredicted RBP11.39□□□□□ -0.59
FGD2-201ENST00000274963 TRAV12-2A0A075B6T6 113 aa11.39□□□□□ -0.59
FGD2-201ENST00000274963 TRAV12-3A0A0B4J271 114 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms