RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 ZNF575Q86XF7 245 aa12.42□□□□□ -0.42
SKP2-201ENST00000274254 ISOC2Q96AB3 205 aa12.42□□□□□ -0.42
SKP2-201ENST00000274254 ORM1P02763 201 aa12.41□□□□□ -0.42
SKP2-201ENST00000274254 NHLRC4P0CG21 123 aaPredicted RBP12.41□□□□□ -0.42
SKP2-201ENST00000274254 HTN1P15515 57 aa12.41□□□□□ -0.42
SKP2-201ENST00000274254 AZU1P20160 251 aa12.41□□□□□ -0.42
SKP2-201ENST00000274254 PNRC1Q12796 327 aaPredicted RBP12.41□□□□□ -0.42
SKP2-201ENST00000274254 ADIRFQ15847 76 aa12.41□□□□□ -0.42
SKP2-201ENST00000274254 RRN3P1Q2M238 152 aa12.41□□□□□ -0.42
SKP2-201ENST00000274254 FAM231DQ6ZW35 169 aa12.41□□□□□ -0.42
SKP2-201ENST00000274254 DAZAP1Q96EP5 407 aaKnown RBP12.41□□□□□ -0.42
SKP2-201ENST00000274254 KCNS1Q96KK3 526 aa12.41□□□□□ -0.42
SKP2-201ENST00000274254 RNASE7Q9H1E1 156 aaKnown RBP12.41□□□□□ -0.42
SKP2-201ENST00000274254 ZMAT4Q9H898 229 aa12.41□□□□□ -0.42
SKP2-201ENST00000274254 TP53TG3Q9ULZ0 132 aa12.41□□□□□ -0.42
SKP2-201ENST00000274254 CBY3A6NI87 242 aa12.4□□□□□ -0.42
SKP2-201ENST00000274254 KRBOX1C9JBD0 128 aa12.4□□□□□ -0.42
SKP2-201ENST00000274254 M0R036 132 aa12.4□□□□□ -0.42
SKP2-201ENST00000274254 MIFP14174 115 aa12.4□□□□□ -0.42
SKP2-201ENST00000274254 Q8NAQ8 132 aa12.4□□□□□ -0.42
SKP2-201ENST00000274254 NUDT10Q8NFP7 164 aa12.4□□□□□ -0.42
SKP2-201ENST00000274254 RNASE8Q8TDE3 154 aaKnown RBP12.4□□□□□ -0.42
SKP2-201ENST00000274254 NUDT11Q96G61 164 aa12.4□□□□□ -0.42
SKP2-201ENST00000274254 CARHSP1Q9Y2V2 147 aaKnown RBP12.4□□□□□ -0.42
SKP2-201ENST00000274254 HUWE1Q7Z6Z7 4374 aaKnown RBP12.39□□□□□ -0.43
SKP2-201ENST00000274254 B4DEV8 164 aa12.39□□□□□ -0.43
SKP2-201ENST00000274254 P01737 135 aa12.39□□□□□ -0.43
SKP2-201ENST00000274254 TYMSP04818 313 aa12.39□□□□□ -0.43
SKP2-201ENST00000274254 IBA57Q5T440 356 aaKnown RBP12.39□□□□□ -0.43
SKP2-201ENST00000274254 TMEM263Q8WUH6 116 aaKnown RBP12.39□□□□□ -0.43
SKP2-201ENST00000274254 IGHV4-28A0A0C4DH34 117 aa12.38□□□□□ -0.43
SKP2-201ENST00000274254 GNRH2O43555 120 aa12.38□□□□□ -0.43
SKP2-201ENST00000274254 ERVFC1-1P60608 527 aa12.38□□□□□ -0.43
SKP2-201ENST00000274254 RPL19P84098 196 aaKnown RBP12.38□□□□□ -0.43
SKP2-201ENST00000274254 ZNF493Q6ZR52 646 aa12.38□□□□□ -0.43
SKP2-201ENST00000274254 C11orf72Q8NBR9 251 aa12.38□□□□□ -0.43
SKP2-201ENST00000274254 C16orf74Q96GX8 76 aa12.38□□□□□ -0.43
SKP2-201ENST00000274254 OSTCQ9NRP0 149 aa12.38□□□□□ -0.43
SKP2-201ENST00000274254 TRGV11A0A075B6L2 103 aa12.37□□□□□ -0.43
SKP2-201ENST00000274254 PLAC8L1A1L4L8 177 aa12.37□□□□□ -0.43
SKP2-201ENST00000274254 SFRP2Q96HF1 295 aa12.37□□□□□ -0.43
SKP2-201ENST00000274254 COL7A1Q02388 2944 aa12.37□□□□□ -0.43
SKP2-201ENST00000274254 IGHV3-16A0A0C4DH30 117 aa12.37□□□□□ -0.43
SKP2-201ENST00000274254 TMEM189A5PLL7 270 aa12.37□□□□□ -0.43
SKP2-201ENST00000274254 CXCL1P09341 107 aa12.37□□□□□ -0.43
SKP2-201ENST00000274254 DNLZQ5SXM8 178 aa12.37□□□□□ -0.43
SKP2-201ENST00000274254 OR2D3Q8NGH3 330 aa12.37□□□□□ -0.43
SKP2-201ENST00000274254 RPP21Q9H633 154 aaKnown RBP12.37□□□□□ -0.43
SKP2-201ENST00000274254 MDFICQ9P1T7 246 aa12.37□□□□□ -0.43
SKP2-201ENST00000274254 TMSB15BA0A087X1C1 80 aa12.36□□□□□ -0.43
SKP2-201ENST00000274254 RNASE3P12724 160 aaKnown RBP12.35□□□□□ -0.43
SKP2-201ENST00000274254 CT83Q5H943 113 aa12.35□□□□□ -0.43
SKP2-201ENST00000274254 IL17DQ8TAD2 202 aa12.35□□□□□ -0.43
SKP2-201ENST00000274254 C11orf68Q9H3H3 251 aaKnown RBP12.35□□□□□ -0.43
SKP2-201ENST00000274254 GSN-AS1Q9NRJ2 163 aa12.35□□□□□ -0.43
SKP2-201ENST00000274254 GATCO43716 136 aaKnown RBP12.34□□□□□ -0.43
SKP2-201ENST00000274254 TCL1AP56279 114 aa12.34□□□□□ -0.43
SKP2-201ENST00000274254 RPS20P60866 119 aaKnown RBP12.34□□□□□ -0.43
SKP2-201ENST00000274254 ZNF415Q09FC8 603 aa12.34□□□□□ -0.43
SKP2-201ENST00000274254 C15orf54Q8N8G6 183 aa12.34□□□□□ -0.43
SKP2-201ENST00000274254 OR10G8Q8NGN5 311 aa12.34□□□□□ -0.43
SKP2-201ENST00000274254 V9GYV3 84 aa12.34□□□□□ -0.43
SKP2-201ENST00000274254 XKRY2A2RUG3 117 aa12.33□□□□□ -0.44
SKP2-201ENST00000274254 GRIFINA4D1Z8 144 aa12.33□□□□□ -0.44
SKP2-201ENST00000274254 DEFB4AO15263 64 aa12.33□□□□□ -0.44
SKP2-201ENST00000274254 ASIPP42127 132 aa12.33□□□□□ -0.44
SKP2-201ENST00000274254 C9orf85Q96MD7 179 aa12.33□□□□□ -0.44
SKP2-201ENST00000274254 IL36BQ9NZH7 164 aa12.33□□□□□ -0.44
SKP2-201ENST00000274254 STAB2Q8WWQ8 2551 aa12.33□□□□□ -0.44
SKP2-201ENST00000274254 GZMBP10144 247 aa12.32□□□□□ -0.44
SKP2-201ENST00000274254 DAZ2Q13117 558 aaKnown RBP12.32□□□□□ -0.44
SKP2-201ENST00000274254 TIMM8BQ9Y5J9 83 aaPredicted RBP12.32□□□□□ -0.44
SKP2-201ENST00000274254 APOC3P02656 99 aa12.32□□□□□ -0.44
SKP2-201ENST00000274254 MED14OSP0DP75 135 aa12.32□□□□□ -0.44
SKP2-201ENST00000274254 S100A4P26447 101 aaKnown RBP12.32□□□□□ -0.44
SKP2-201ENST00000274254 EMP1P54849 157 aa12.32□□□□□ -0.44
SKP2-201ENST00000274254 RNF212Q495C1 297 aa12.32□□□□□ -0.44
SKP2-201ENST00000274254 SCRT2Q9NQ03 307 aa12.32□□□□□ -0.44
SKP2-201ENST00000274254 MUC4Q99102 2169 aa12.31□□□□□ -0.44
SKP2-201ENST00000274254 A0A0J9YWU9 116 aa12.31□□□□□ -0.44
SKP2-201ENST00000274254 A8MWL6 223 aa12.31□□□□□ -0.44
SKP2-201ENST00000274254 SNURFLB1AK76 121 aa12.31□□□□□ -0.44
SKP2-201ENST00000274254 H3BVH4 76 aa12.31□□□□□ -0.44
SKP2-201ENST00000274254 ARMS2P0C7Q2 107 aa12.31□□□□□ -0.44
SKP2-201ENST00000274254 IGLC6P0CF74 106 aa12.31□□□□□ -0.44
SKP2-201ENST00000274254 SSBP4Q9BWG4 385 aaPredicted RBP12.31□□□□□ -0.44
SKP2-201ENST00000274254 NOP10Q9NPE3 64 aaKnown RBP12.31□□□□□ -0.44
SKP2-201ENST00000274254 U3KQK5 164 aa12.31□□□□□ -0.44
SKP2-201ENST00000274254 PPP1R2P9O14990 202 aa12.3□□□□□ -0.44
SKP2-201ENST00000274254 MT-ND4LP03901 98 aa12.3□□□□□ -0.44
SKP2-201ENST00000274254 SVBPQ8N300 66 aa12.3□□□□□ -0.44
SKP2-201ENST00000274254 CLRN3Q8NCR9 226 aa12.3□□□□□ -0.44
SKP2-201ENST00000274254 TSKUQ8WUA8 353 aa12.3□□□□□ -0.44
SKP2-201ENST00000274254 GTSF1Q8WW33 167 aa12.3□□□□□ -0.44
SKP2-201ENST00000274254 ANAPC16Q96DE5 110 aa12.3□□□□□ -0.44
SKP2-201ENST00000274254 SPXQ9BT56 116 aa12.3□□□□□ -0.44
SKP2-201ENST00000274254 SNAI2O43623 268 aa12.29□□□□□ -0.44
SKP2-201ENST00000274254 OR5AL1P0C617 328 aa12.29□□□□□ -0.44
SKP2-201ENST00000274254 FOXA3P55318 350 aaPredicted RBP12.29□□□□□ -0.44
SKP2-201ENST00000274254 FER1L6-AS1Q8NA97 138 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms