RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 FGFBP3Q8TAT2 258 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 TMEM190Q8WZ59 177 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 FGF16O43320 207 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 FAM208BQ5VWN6 2430 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 IGLV3-9A0A075B6K5 115 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 C5orf64Q2M2E5 130 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 HS3ST6Q96QI5 342 aa12.7□□□□□ -0.38
UBR3-201ENST00000272793 IGKV1D-8A0A087WSZ0 117 aa12.69□□□□□ -0.38
UBR3-201ENST00000272793 KIR2DL5BA0A0G2JN68 375 aa12.69□□□□□ -0.38
UBR3-201ENST00000272793 KIR2DL5BA0A0G2JPC4 375 aa12.69□□□□□ -0.38
UBR3-201ENST00000272793 WI2-2373I1.2A0A1W2PRP0 233 aa12.69□□□□□ -0.38
UBR3-201ENST00000272793 KIR2DL5AQ8N109 375 aa12.69□□□□□ -0.38
UBR3-201ENST00000272793 BUB1B-PAK6H3BSN5 160 aa12.69□□□□□ -0.38
UBR3-201ENST00000272793 WISP3O95389 354 aaPredicted RBP12.69□□□□□ -0.38
UBR3-201ENST00000272793 ICOSQ9Y6W8 199 aa12.69□□□□□ -0.38
UBR3-201ENST00000272793 TMEM178BH3BS89 294 aa12.69□□□□□ -0.38
UBR3-201ENST00000272793 TMEM256-PLSCR3K7ERE1 68 aa12.69□□□□□ -0.38
UBR3-201ENST00000272793 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.69□□□□□ -0.38
UBR3-201ENST00000272793 SPANXB1Q9NS25 103 aaPredicted RBP12.69□□□□□ -0.38
UBR3-201ENST00000272793 IGKV1D-12P01611 117 aa12.69□□□□□ -0.38
UBR3-201ENST00000272793 CXCL5P42830 114 aa12.69□□□□□ -0.38
UBR3-201ENST00000272793 LINC01356Q8N9X3 169 aa12.68□□□□□ -0.38
UBR3-201ENST00000272793 GPR179Q6PRD1 2367 aa12.68□□□□□ -0.38
UBR3-201ENST00000272793 IGHV4-61A0A0C4DH41 118 aa12.68□□□□□ -0.38
UBR3-201ENST00000272793 PRSS46E5RG02 174 aa12.68□□□□□ -0.38
UBR3-201ENST00000272793 C9JQL5 133 aa12.68□□□□□ -0.38
UBR3-201ENST00000272793 PLA2G1BP04054 148 aaKnown RBP12.68□□□□□ -0.38
UBR3-201ENST00000272793 MST1LQ2TV78 715 aa12.68□□□□□ -0.38
UBR3-201ENST00000272793 B4DSR2 109 aa12.68□□□□□ -0.38
UBR3-201ENST00000272793 IGKV2D-26A0A0A0MRZ7 120 aa12.68□□□□□ -0.38
UBR3-201ENST00000272793 SND1-IT1Q9HBX3 110 aa12.68□□□□□ -0.38
UBR3-201ENST00000272793 OVOL3O00110 214 aa12.67□□□□□ -0.38
UBR3-201ENST00000272793 IGHV2-70P01814 119 aa12.67□□□□□ -0.38
UBR3-201ENST00000272793 CR1LQ2VPA4 569 aa12.67□□□□□ -0.38
UBR3-201ENST00000272793 C9orf106Q8NAJ2 232 aa12.67□□□□□ -0.38
UBR3-201ENST00000272793 DKK2Q9UBU2 259 aa12.67□□□□□ -0.38
UBR3-201ENST00000272793 ZNF672Q499Z4 452 aaPredicted RBP12.67□□□□□ -0.38
UBR3-201ENST00000272793 RNF152Q8N8N0 203 aa12.67□□□□□ -0.38
UBR3-201ENST00000272793 TEX49A0A1B0GTD5 131 aa12.67□□□□□ -0.38
UBR3-201ENST00000272793 IGLC7A0M8Q6 106 aa12.67□□□□□ -0.38
UBR3-201ENST00000272793 ZNF134P52741 427 aa12.67□□□□□ -0.38
UBR3-201ENST00000272793 CFC1BP0CG36 223 aa12.67□□□□□ -0.38
UBR3-201ENST00000272793 CFC1P0CG37 223 aa12.67□□□□□ -0.38
UBR3-201ENST00000272793 NTF4P34130 210 aa12.67□□□□□ -0.38
UBR3-201ENST00000272793 COX7A2LO14548 114 aa12.66□□□□□ -0.38
UBR3-201ENST00000272793 SAA4P35542 130 aa12.66□□□□□ -0.38
UBR3-201ENST00000272793 LYZL4Q96KX0 146 aa12.66□□□□□ -0.38
UBR3-201ENST00000272793 CCL18P55774 89 aa12.66□□□□□ -0.38
UBR3-201ENST00000272793 PFN1P07737 140 aaKnown RBP12.66□□□□□ -0.38
UBR3-201ENST00000272793 C5orf24Q7Z6I8 188 aa12.66□□□□□ -0.38
UBR3-201ENST00000272793 B9D2Q9BPU9 175 aa12.66□□□□□ -0.38
UBR3-201ENST00000272793 ZSWIM8A7E2V4 1837 aa12.65□□□□□ -0.38
UBR3-201ENST00000272793 LINC00271P0C7V0 271 aa12.65□□□□□ -0.38
UBR3-201ENST00000272793 LINC00205P59089 165 aa12.65□□□□□ -0.38
UBR3-201ENST00000272793 PDE6HQ13956 83 aa12.65□□□□□ -0.38
UBR3-201ENST00000272793 IGHV3-30P01768 117 aa12.65□□□□□ -0.38
UBR3-201ENST00000272793 IGHV3-33P01772 117 aa12.65□□□□□ -0.38
UBR3-201ENST00000272793 IGHV3-30-3P0DP02 117 aa12.65□□□□□ -0.38
UBR3-201ENST00000272793 IGHV3-30-5P0DP03 117 aa12.65□□□□□ -0.38
UBR3-201ENST00000272793 ASPHD1Q5U4P2 390 aa12.65□□□□□ -0.38
UBR3-201ENST00000272793 GTSF1Q8WW33 167 aa12.65□□□□□ -0.38
UBR3-201ENST00000272793 IGKV1-27A0A075B6S5 117 aa12.65□□□□□ -0.38
UBR3-201ENST00000272793 WDR83OSQ9Y284 106 aa12.65□□□□□ -0.38
UBR3-201ENST00000272793 Q86TA4 180 aa12.65□□□□□ -0.39
UBR3-201ENST00000272793 MAPK1IP1LQ8NDC0 245 aa12.65□□□□□ -0.39
UBR3-201ENST00000272793 SIGLEC8Q9NYZ4 499 aa12.64□□□□□ -0.39
UBR3-201ENST00000272793 CHCHD2Q9Y6H1 151 aaPredicted RBP12.64□□□□□ -0.39
UBR3-201ENST00000272793 H0YJW9 148 aa12.64□□□□□ -0.39
UBR3-201ENST00000272793 LGALS9BQ3B8N2 356 aa12.64□□□□□ -0.39
UBR3-201ENST00000272793 LGALS9CQ6DKI2 356 aa12.64□□□□□ -0.39
UBR3-201ENST00000272793 TEN1Q86WV5 123 aa12.64□□□□□ -0.39
UBR3-201ENST00000272793 CTHRC1Q96CG8 243 aa12.64□□□□□ -0.39
UBR3-201ENST00000272793 A0A0G2JMZ2 1700 aa12.64□□□□□ -0.39
UBR3-201ENST00000272793 LRRC37A2A6NM11 1700 aa12.64□□□□□ -0.39
UBR3-201ENST00000272793 LRRC37AA6NMS7 1700 aa12.64□□□□□ -0.39
UBR3-201ENST00000272793 WBP1Q96G27 269 aa12.64□□□□□ -0.39
UBR3-201ENST00000272793 SERP2Q8N6R1 65 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 IGHV1-18A0A0C4DH31 117 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 CRYGSP22914 178 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 NPBQ8NG41 125 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 GAFA1Q96PS6 74 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 REG4Q9BYZ8 158 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 ITGBL1O95965 494 aaPredicted RBP12.63□□□□□ -0.39
UBR3-201ENST00000272793 C8orf86Q6ZUL3 223 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 KLF2Q9Y5W3 355 aaPredicted RBP12.63□□□□□ -0.39
UBR3-201ENST00000272793 C1orf195Q5TG92 126 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 TEX36Q5VZQ5 186 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 ZNF491Q8N8L2 437 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 ABCA2Q9BZC7 2435 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 IGHV4-38-2P0DP08 117 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 CD177Q8N6Q3 437 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 C18orf32Q8TCD1 76 aa12.63□□□□□ -0.39
UBR3-201ENST00000272793 IGKV1-9A0A0C4DH69 117 aa12.62□□□□□ -0.39
UBR3-201ENST00000272793 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
UBR3-201ENST00000272793 BPY2O14599 106 aa12.62□□□□□ -0.39
UBR3-201ENST00000272793 RHOHQ15669 191 aa12.62□□□□□ -0.39
UBR3-201ENST00000272793 IGHV1-46P01743 117 aa12.62□□□□□ -0.39
UBR3-201ENST00000272793 WDR86Q86TI4 376 aa12.62□□□□□ -0.39
UBR3-201ENST00000272793 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
UBR3-201ENST00000272793 PTPRSQ13332 1948 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms