RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 STAB2Q8WWQ8 2551 aa18.21■□□□□ 0.51
SSBP4-201ENST00000270061 F6UB75 175 aa18.21■□□□□ 0.51
SSBP4-201ENST00000270061 ZNF688P0C7X2 276 aa18.21■□□□□ 0.51
SSBP4-201ENST00000270061 DEFB1P60022 68 aa18.21■□□□□ 0.51
SSBP4-201ENST00000270061 LINC01559Q495D7 138 aa18.21■□□□□ 0.51
SSBP4-201ENST00000270061 CD300EQ496F6 205 aaPredicted RBP18.21■□□□□ 0.51
SSBP4-201ENST00000270061 PGLYRP4Q96LB8 373 aa18.21■□□□□ 0.51
SSBP4-201ENST00000270061 MRPL18Q9H0U6 180 aaKnown RBP18.21■□□□□ 0.51
SSBP4-201ENST00000270061 HLA-DQA1P01909 254 aa18.2■□□□□ 0.5
SSBP4-201ENST00000270061 CRISP2P16562 243 aa18.2■□□□□ 0.5
SSBP4-201ENST00000270061 PSMG4Q5JS54 123 aa18.2■□□□□ 0.5
SSBP4-201ENST00000270061 GTSCR1Q86UQ5 136 aa18.2■□□□□ 0.5
SSBP4-201ENST00000270061 APRG1Q8IVJ8 170 aa18.2■□□□□ 0.5
SSBP4-201ENST00000270061 ZFAND2AQ8N6M9 145 aa18.2■□□□□ 0.5
SSBP4-201ENST00000270061 ZNF575Q86XF7 245 aa18.19■□□□□ 0.5
SSBP4-201ENST00000270061 HUWE1Q7Z6Z7 4374 aaKnown RBP18.19■□□□□ 0.5
SSBP4-201ENST00000270061 TRAV25A0A0B4J276 109 aa18.18■□□□□ 0.5
SSBP4-201ENST00000270061 IGHV4-30-4P0DP06 118 aa18.18■□□□□ 0.5
SSBP4-201ENST00000270061 NDUFA6P56556 154 aa18.18■□□□□ 0.5
SSBP4-201ENST00000270061 HBBP68871 147 aa18.18■□□□□ 0.5
SSBP4-201ENST00000270061 SBSPONQ8IVN8 264 aa18.18■□□□□ 0.5
SSBP4-201ENST00000270061 TMEM61Q8N0U2 210 aa18.18■□□□□ 0.5
SSBP4-201ENST00000270061 ODF3Q96PU9 254 aa18.18■□□□□ 0.5
SSBP4-201ENST00000270061 U3KQK5 164 aa18.18■□□□□ 0.5
SSBP4-201ENST00000270061 TENM3Q9P273 2699 aa18.18■□□□□ 0.5
SSBP4-201ENST00000270061 A0A0J9YX75 114 aa18.17■□□□□ 0.5
SSBP4-201ENST00000270061 UBE2CO00762 179 aa18.17■□□□□ 0.5
SSBP4-201ENST00000270061 ORM1P02763 201 aa18.17■□□□□ 0.5
SSBP4-201ENST00000270061 A0A1B0GUT8 65 aa18.16■□□□□ 0.5
SSBP4-201ENST00000270061 A0A1B0GW15 77 aa18.15■□□□□ 0.5
SSBP4-201ENST00000270061 HOXA5P20719 270 aa18.15■□□□□ 0.5
SSBP4-201ENST00000270061 RAB4BP61018 213 aa18.15■□□□□ 0.5
SSBP4-201ENST00000270061 PRR9Q5T870 116 aa18.15■□□□□ 0.5
SSBP4-201ENST00000270061 GDF5OSQ5U4N7 250 aa18.15■□□□□ 0.5
SSBP4-201ENST00000270061 EBLN2Q6P2I7 272 aa18.15■□□□□ 0.5
SSBP4-201ENST00000270061 FOXI2Q6ZQN5 318 aa18.15■□□□□ 0.5
SSBP4-201ENST00000270061 TMSB15BA0A087X1C1 80 aa18.14■□□□□ 0.5
SSBP4-201ENST00000270061 A8MZ25 164 aa18.14■□□□□ 0.5
SSBP4-201ENST00000270061 DUSP14O95147 198 aaKnown RBP18.14■□□□□ 0.5
SSBP4-201ENST00000270061 IGLC6P0CF74 106 aa18.14■□□□□ 0.5
SSBP4-201ENST00000270061 RIGQ13278 110 aa18.14■□□□□ 0.5
SSBP4-201ENST00000270061 COA6Q5JTJ3 125 aaKnown RBP18.14■□□□□ 0.5
SSBP4-201ENST00000270061 SPAG8Q99932 426 aaPredicted RBP18.14■□□□□ 0.5
SSBP4-201ENST00000270061 TRAV21A0A0B4J279 112 aa18.14■□□□□ 0.49
SSBP4-201ENST00000270061 IGKV3D-20A0A0C4DH25 116 aa18.14■□□□□ 0.49
SSBP4-201ENST00000270061 C11orf21Q9P2W6 132 aa18.14■□□□□ 0.49
SSBP4-201ENST00000270061 KLLNB2CW77 178 aa18.13■□□□□ 0.49
SSBP4-201ENST00000270061 GPX1P07203 203 aa18.13■□□□□ 0.49
SSBP4-201ENST00000270061 CAMPP49913 170 aa18.13■□□□□ 0.49
SSBP4-201ENST00000270061 WWC2-AS2Q96NR7 200 aa18.13■□□□□ 0.49
SSBP4-201ENST00000270061 C19orf73Q9NVV2 129 aa18.13■□□□□ 0.49
SSBP4-201ENST00000270061 APCSP02743 223 aa18.12■□□□□ 0.49
SSBP4-201ENST00000270061 CTRLP40313 264 aa18.12■□□□□ 0.49
SSBP4-201ENST00000270061 FER1L6-AS1Q8NA97 138 aa18.12■□□□□ 0.49
SSBP4-201ENST00000270061 GATD1Q8NB37 220 aa18.12■□□□□ 0.49
SSBP4-201ENST00000270061 BORCS7Q96B45 105 aa18.12■□□□□ 0.49
SSBP4-201ENST00000270061 S100A8P05109 93 aa18.12■□□□□ 0.49
SSBP4-201ENST00000270061 ARMS2P0C7Q2 107 aa18.12■□□□□ 0.49
SSBP4-201ENST00000270061 LYZL1Q6UWQ5 148 aa18.12■□□□□ 0.49
SSBP4-201ENST00000270061 OR4C46A6NHA9 309 aa18.11■□□□□ 0.49
SSBP4-201ENST00000270061 LEPP41159 167 aa18.1■□□□□ 0.49
SSBP4-201ENST00000270061 ZMAT4Q9H898 229 aa18.1■□□□□ 0.49
SSBP4-201ENST00000270061 SLAQ13239 276 aa18.09■□□□□ 0.49
SSBP4-201ENST00000270061 CNFNQ9BYD5 112 aa18.09■□□□□ 0.49
SSBP4-201ENST00000270061 A8MTW9 85 aa18.09■□□□□ 0.49
SSBP4-201ENST00000270061 F2Z2F3 143 aa18.09■□□□□ 0.49
SSBP4-201ENST00000270061 CD7P09564 240 aa18.09■□□□□ 0.49
SSBP4-201ENST00000270061 RNASE4P34096 147 aaKnown RBP18.09■□□□□ 0.49
SSBP4-201ENST00000270061 DEFB131AP59861 70 aa18.09■□□□□ 0.49
SSBP4-201ENST00000270061 TPPP3Q9BW30 176 aa18.09■□□□□ 0.49
SSBP4-201ENST00000270061 NBEAL2Q6ZNJ1 2754 aa18.09■□□□□ 0.49
SSBP4-201ENST00000270061 Q6ZQT7 251 aa18.08■□□□□ 0.48
SSBP4-201ENST00000270061 RCHY1Q96PM5 261 aa18.08■□□□□ 0.48
SSBP4-201ENST00000270061 GRIFINA4D1Z8 144 aa18.07■□□□□ 0.48
SSBP4-201ENST00000270061 J3KRW8 73 aa18.07■□□□□ 0.48
SSBP4-201ENST00000270061 TSPOP30536 169 aa18.07■□□□□ 0.48
SSBP4-201ENST00000270061 ZNF493Q6ZR52 646 aa18.07■□□□□ 0.48
SSBP4-201ENST00000270061 MAP6D1Q9H9H5 199 aa18.07■□□□□ 0.48
SSBP4-201ENST00000270061 HLA-DRB4P13762 266 aa18.06■□□□□ 0.48
SSBP4-201ENST00000270061 Q0VG73 95 aa18.06■□□□□ 0.48
SSBP4-201ENST00000270061 KIR3DS1Q14943 382 aa18.06■□□□□ 0.48
SSBP4-201ENST00000270061 SSBP4Q9BWG4 385 aaPredicted RBP18.06■□□□□ 0.48
SSBP4-201ENST00000270061 HLA-DRB4X5D2U9 266 aa18.06■□□□□ 0.48
SSBP4-201ENST00000270061 KIAA1644Q3SXP7 199 aa18.05■□□□□ 0.48
SSBP4-201ENST00000270061 AMTNQ6UX39 209 aa18.05■□□□□ 0.48
SSBP4-201ENST00000270061 HIST3H2BBQ8N257 126 aa18.05■□□□□ 0.48
SSBP4-201ENST00000270061 TM2D3Q9BRN9 247 aa18.05■□□□□ 0.48
SSBP4-201ENST00000270061 OR11H12B2RN74 326 aa18.04■□□□□ 0.48
SSBP4-201ENST00000270061 OR5AL1P0C617 328 aa18.04■□□□□ 0.48
SSBP4-201ENST00000270061 CDKN1BP46527 198 aa18.04■□□□□ 0.48
SSBP4-201ENST00000270061 GFI1BQ5VTD9 330 aa18.04■□□□□ 0.48
SSBP4-201ENST00000270061 DEFB125Q8N687 156 aa18.04■□□□□ 0.48
SSBP4-201ENST00000270061 WFDC10AQ9H1F0 79 aa18.04■□□□□ 0.48
SSBP4-201ENST00000270061 C7orf71A4D174 169 aa18.03■□□□□ 0.48
SSBP4-201ENST00000270061 H3BMM0 161 aa18.03■□□□□ 0.48
SSBP4-201ENST00000270061 OR10J3Q5JRS4 329 aa18.03■□□□□ 0.48
SSBP4-201ENST00000270061 DNLZQ5SXM8 178 aa18.03■□□□□ 0.48
SSBP4-201ENST00000270061 SNAI2O43623 268 aa18.02■□□□□ 0.48
SSBP4-201ENST00000270061 ZNF324O75467 553 aaPredicted RBP18.02■□□□□ 0.48
SSBP4-201ENST00000270061 KNCNA6PVL3 124 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms