RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 F2Z2F3 143 aa11.46□□□□□ -0.58
COPS3-201ENST00000268717 Q0VG73 95 aa11.46□□□□□ -0.58
COPS3-201ENST00000268717 TMEM61Q8N0U2 210 aa11.46□□□□□ -0.58
COPS3-201ENST00000268717 HIST3H2BBQ8N257 126 aa11.46□□□□□ -0.58
COPS3-201ENST00000268717 IGKV3D-20A0A0C4DH25 116 aa11.45□□□□□ -0.58
COPS3-201ENST00000268717 ARMS2P0C7Q2 107 aa11.45□□□□□ -0.58
COPS3-201ENST00000268717 LEPP41159 167 aa11.45□□□□□ -0.58
COPS3-201ENST00000268717 CAMPP49913 170 aa11.45□□□□□ -0.58
COPS3-201ENST00000268717 SLAQ13239 276 aa11.45□□□□□ -0.58
COPS3-201ENST00000268717 OR10J3Q5JRS4 329 aa11.45□□□□□ -0.58
COPS3-201ENST00000268717 PRR9Q5T870 116 aa11.45□□□□□ -0.58
COPS3-201ENST00000268717 LYZL1Q6UWQ5 148 aa11.45□□□□□ -0.58
COPS3-201ENST00000268717 ZNF493Q6ZR52 646 aa11.45□□□□□ -0.58
COPS3-201ENST00000268717 TMSB15BA0A087X1C1 80 aa11.44□□□□□ -0.58
COPS3-201ENST00000268717 OR4C46A6NHA9 309 aa11.44□□□□□ -0.58
COPS3-201ENST00000268717 A8MTW9 85 aa11.44□□□□□ -0.58
COPS3-201ENST00000268717 GPX1P07203 203 aa11.44□□□□□ -0.58
COPS3-201ENST00000268717 DEFB1P60022 68 aa11.44□□□□□ -0.58
COPS3-201ENST00000268717 C11orf21Q9P2W6 132 aa11.44□□□□□ -0.58
COPS3-201ENST00000268717 TSPOP30536 169 aa11.42□□□□□ -0.58
COPS3-201ENST00000268717 CD300EQ496F6 205 aaPredicted RBP11.42□□□□□ -0.58
COPS3-201ENST00000268717 OR2K2Q8NGT1 345 aa11.42□□□□□ -0.58
COPS3-201ENST00000268717 OR5AL1P0C617 328 aa11.42□□□□□ -0.58
COPS3-201ENST00000268717 MED14OSP0DP75 135 aa11.42□□□□□ -0.58
COPS3-201ENST00000268717 ESDP10768 282 aa11.42□□□□□ -0.58
COPS3-201ENST00000268717 DNLZQ5SXM8 178 aa11.42□□□□□ -0.58
COPS3-201ENST00000268717 TPPP3Q9BW30 176 aa11.42□□□□□ -0.58
COPS3-201ENST00000268717 SSBP4Q9BWG4 385 aaPredicted RBP11.42□□□□□ -0.58
COPS3-201ENST00000268717 SNAI2O43623 268 aa11.41□□□□□ -0.58
COPS3-201ENST00000268717 HLA-DRB4P13762 266 aa11.41□□□□□ -0.58
COPS3-201ENST00000268717 S100A2P29034 98 aa11.41□□□□□ -0.58
COPS3-201ENST00000268717 AKR1D1P51857 326 aa11.41□□□□□ -0.58
COPS3-201ENST00000268717 ZNF256Q9Y2P7 627 aaPredicted RBP11.41□□□□□ -0.58
COPS3-201ENST00000268717 HLA-DRB4X5D2U9 266 aa11.41□□□□□ -0.58
COPS3-201ENST00000268717 NOTCH1P46531 2555 aa11.41□□□□□ -0.58
COPS3-201ENST00000268717 IFITM10A6NMD0 228 aa11.4□□□□□ -0.58
COPS3-201ENST00000268717 SRIP30626 198 aa11.4□□□□□ -0.58
COPS3-201ENST00000268717 RNASE4P34096 147 aaKnown RBP11.4□□□□□ -0.58
COPS3-201ENST00000268717 GFI1BQ5VTD9 330 aa11.4□□□□□ -0.58
COPS3-201ENST00000268717 CLUHP3Q96NS8 147 aa11.4□□□□□ -0.58
COPS3-201ENST00000268717 ALKBH7Q9BT30 221 aaPredicted RBP11.4□□□□□ -0.58
COPS3-201ENST00000268717 IGHV4-4A0A075B6R2 117 aa11.39□□□□□ -0.59
COPS3-201ENST00000268717 LOC102724200A0A096LPH7 203 aaPredicted RBP11.39□□□□□ -0.59
COPS3-201ENST00000268717 C7orf71A4D174 169 aa11.39□□□□□ -0.59
COPS3-201ENST00000268717 GRIFINA4D1Z8 144 aa11.39□□□□□ -0.59
COPS3-201ENST00000268717 CDKN1BP46527 198 aa11.39□□□□□ -0.59
COPS3-201ENST00000268717 KIAA1644Q3SXP7 199 aa11.39□□□□□ -0.59
COPS3-201ENST00000268717 DMRTA1Q5VZB9 504 aa11.39□□□□□ -0.59
COPS3-201ENST00000268717 AMTNQ6UX39 209 aa11.39□□□□□ -0.59
COPS3-201ENST00000268717 CD33P20138 364 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 CMC4P56277 68 aaPredicted RBP11.38□□□□□ -0.59
COPS3-201ENST00000268717 DEFB131AP59861 70 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 CACNG7P62955 275 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 NSUN5P1Q3KNT7 163 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 KCNS1Q96KK3 526 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 MAP6D1Q9H9H5 199 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 TP53TG3Q9ULZ0 132 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 MEGF8Q7Z7M0 2845 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 TDRG1Q3Y452 100 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 BAGE3Q86Y29 109 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 PACRGQ96M98 296 aaPredicted RBP11.38□□□□□ -0.59
COPS3-201ENST00000268717 HIST1H2BLQ99880 126 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 FAM110AQ9BQ89 295 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 TMEM191AQ9H0A3 160 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 NOTCH3Q9UM47 2321 aa11.38□□□□□ -0.59
COPS3-201ENST00000268717 H3BMM0 161 aa11.37□□□□□ -0.59
COPS3-201ENST00000268717 J3KRW8 73 aa11.37□□□□□ -0.59
COPS3-201ENST00000268717 ZNF324O75467 553 aaPredicted RBP11.37□□□□□ -0.59
COPS3-201ENST00000268717 IGLV1-51P01701 117 aa11.37□□□□□ -0.59
COPS3-201ENST00000268717 NTF3P20783 257 aa11.37□□□□□ -0.59
COPS3-201ENST00000268717 ASIPP42127 132 aa11.37□□□□□ -0.59
COPS3-201ENST00000268717 FAM104BQ5XKR9 115 aa11.37□□□□□ -0.59
COPS3-201ENST00000268717 C18orf32Q8TCD1 76 aa11.37□□□□□ -0.59
COPS3-201ENST00000268717 TMEM18Q96B42 140 aa11.37□□□□□ -0.59
COPS3-201ENST00000268717 SMIM6P0DI80 62 aa11.36□□□□□ -0.59
COPS3-201ENST00000268717 LINC00310P59036 64 aa11.36□□□□□ -0.59
COPS3-201ENST00000268717 TWIST1Q15672 202 aa11.36□□□□□ -0.59
COPS3-201ENST00000268717 ANXA2RQ3ZCQ2 193 aa11.36□□□□□ -0.59
COPS3-201ENST00000268717 Q6ZQT7 251 aa11.36□□□□□ -0.59
COPS3-201ENST00000268717 SCRT2Q9NQ03 307 aa11.36□□□□□ -0.59
COPS3-201ENST00000268717 SAP30O75446 220 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 AMBPP02760 352 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 KIR3DS1Q14943 382 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 PDZD11Q5EBL8 140 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 FAM159AQ6UWV7 190 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 LINC00518Q8N0U6 118 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 TMEM256Q8N2U0 113 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 SORL1Q92673 2214 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 SERF1AO75920 110 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 FABP4P15090 132 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 ODF3L2Q3SX64 289 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 LINC00482Q8N8I6 264 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 NAGKQ9UJ70 344 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 U3KQK5 164 aa11.35□□□□□ -0.59
COPS3-201ENST00000268717 PF4P02776 101 aa11.34□□□□□ -0.59
COPS3-201ENST00000268717 S100A4P26447 101 aaKnown RBP11.34□□□□□ -0.59
COPS3-201ENST00000268717 KNCNA6PVL3 124 aa11.33□□□□□ -0.6
COPS3-201ENST00000268717 H3BVH4 76 aa11.33□□□□□ -0.6
COPS3-201ENST00000268717 SMIM15Q7Z3B0 74 aa11.33□□□□□ -0.6
COPS3-201ENST00000268717 OR10AG1Q8NH19 301 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms