RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 CDK2AP2O75956 126 aa6.66□□□□□ -1.34
VPS41-201ENST00000265745 MRPL23Q16540 153 aaKnown RBP6.66□□□□□ -1.34
VPS41-201ENST00000265745 TMEM183BQ1AE95 376 aa6.66□□□□□ -1.34
VPS41-201ENST00000265745 ACOT6Q3I5F7 207 aaPredicted RBP6.66□□□□□ -1.34
VPS41-201ENST00000265745 TDRG1Q3Y452 100 aa6.66□□□□□ -1.34
VPS41-201ENST00000265745 LYPD5Q6UWN5 251 aa6.66□□□□□ -1.34
VPS41-201ENST00000265745 FAM159AQ6UWV7 190 aa6.66□□□□□ -1.34
VPS41-201ENST00000265745 PQLC2Q6ZP29 291 aa6.66□□□□□ -1.34
VPS41-201ENST00000265745 SPATA12Q7Z6I5 190 aa6.66□□□□□ -1.34
VPS41-201ENST00000265745 IQCF2Q8IXL9 164 aa6.66□□□□□ -1.34
VPS41-201ENST00000265745 TMEM183AQ8IXX5 376 aa6.66□□□□□ -1.34
VPS41-201ENST00000265745 ARL6IP6Q8N6S5 226 aa6.66□□□□□ -1.34
VPS41-201ENST00000265745 C8orf49Q96NF6 230 aa6.66□□□□□ -1.34
VPS41-201ENST00000265745 HSPG2P98160 4391 aa6.65□□□□□ -1.34
VPS41-201ENST00000265745 A0A1W2PPV4 95 aa6.65□□□□□ -1.34
VPS41-201ENST00000265745 NXPH4O95158 308 aa6.65□□□□□ -1.34
VPS41-201ENST00000265745 LINC00315P59091 139 aa6.65□□□□□ -1.34
VPS41-201ENST00000265745 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
VPS41-201ENST00000265745 RAB2AP61019 212 aa6.65□□□□□ -1.34
VPS41-201ENST00000265745 NEGR1Q7Z3B1 354 aa6.65□□□□□ -1.34
VPS41-201ENST00000265745 CMTM2Q8TAZ6 248 aa6.65□□□□□ -1.34
VPS41-201ENST00000265745 TVP23CQ96ET8 276 aa6.65□□□□□ -1.34
VPS41-201ENST00000265745 SPXQ9BT56 116 aa6.65□□□□□ -1.34
VPS41-201ENST00000265745 TRGV11A0A075B6L2 103 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 TRGV4A0A0C4DH28 118 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 HMGB3O15347 200 aaKnown RBP6.64□□□□□ -1.35
VPS41-201ENST00000265745 GNRH2O43555 120 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 SFTA3P0C7M3 94 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 GCSHP23434 173 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 FAM74A1Q5RGS3 127 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 Q6ZRN7 208 aaPredicted RBP6.64□□□□□ -1.35
VPS41-201ENST00000265745 GOLT1AQ6ZVE7 132 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 OR10G4Q8NGN3 311 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 OR10G9Q8NGN4 311 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 OR10G7Q8NGN6 311 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 ZNF479Q96JC4 524 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 ALG5Q9Y673 324 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 MUC4Q99102 2169 aa6.64□□□□□ -1.35
VPS41-201ENST00000265745 ABCA13Q86UQ4 5058 aa6.63□□□□□ -1.35
VPS41-201ENST00000265745 TRAV8-1A0A0A6YYK1 113 aa6.63□□□□□ -1.35
VPS41-201ENST00000265745 TRAV21A0A0B4J279 112 aa6.63□□□□□ -1.35
VPS41-201ENST00000265745 IGHV3-16A0A0C4DH30 117 aa6.63□□□□□ -1.35
VPS41-201ENST00000265745 K7EQD1 137 aa6.63□□□□□ -1.35
VPS41-201ENST00000265745 OR2G3Q8NGZ4 309 aa6.63□□□□□ -1.35
VPS41-201ENST00000265745 TREM1Q9NP99 234 aa6.63□□□□□ -1.35
VPS41-201ENST00000265745 NAGKQ9UJ70 344 aa6.63□□□□□ -1.35
VPS41-201ENST00000265745 RPH3ALQ9UNE2 315 aa6.63□□□□□ -1.35
VPS41-201ENST00000265745 DNAH5Q8TE73 4624 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 PRSS47A8MTI9 375 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 M0R2P5 195 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 ORM1P02763 201 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 STAG3L2P0CL84 134 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 STAG3L3P0CL85 134 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 ARL14EPLP0DKL9 152 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 GNG5P63218 68 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 HSD17B11Q8NBQ5 300 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 SUN5Q8TC36 379 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 AQP10Q96PS8 301 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 BATF3Q9NR55 127 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 TNFRSF18Q9Y5U5 241 aa6.62□□□□□ -1.35
VPS41-201ENST00000265745 TRAV4A0A0B4J268 109 aa6.61□□□□□ -1.35
VPS41-201ENST00000265745 SERTM2A0A1B0GWG4 89 aa6.61□□□□□ -1.35
VPS41-201ENST00000265745 F6UZH7 168 aa6.61□□□□□ -1.35
VPS41-201ENST00000265745 TYMSP04818 313 aa6.61□□□□□ -1.35
VPS41-201ENST00000265745 ATP6V0CP27449 155 aa6.61□□□□□ -1.35
VPS41-201ENST00000265745 GCHFRP30047 84 aa6.61□□□□□ -1.35
VPS41-201ENST00000265745 SRIP30626 198 aa6.61□□□□□ -1.35
VPS41-201ENST00000265745 CDC34P49427 236 aaPredicted RBP6.61□□□□□ -1.35
VPS41-201ENST00000265745 Q5BKY6 102 aa6.61□□□□□ -1.35
VPS41-201ENST00000265745 OR4C5Q8NGB2 326 aa6.61□□□□□ -1.35
VPS41-201ENST00000265745 SGK494Q96LW2 274 aa6.61□□□□□ -1.35
VPS41-201ENST00000265745 PSMG3Q9BT73 122 aaPredicted RBP6.61□□□□□ -1.35
VPS41-201ENST00000265745 MED28Q9H204 178 aa6.61□□□□□ -1.35
VPS41-201ENST00000265745 SDF2L1Q9HCN8 221 aa6.61□□□□□ -1.35
VPS41-201ENST00000265745 TRAV9-2A0A087WT02 112 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 C9JCJ5 164 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 K7EP13 123 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 PTTG1O95997 202 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 IGLV2-11P01706 119 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 MBP02144 154 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 TCRAP04437 139 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 ZNF80P51504 273 aaPredicted RBP6.6□□□□□ -1.35
VPS41-201ENST00000265745 LINC00310P59036 64 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 SERF2P84101 59 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 Q8N1X5 172 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 MAPKAPK5-AS1Q8N8E1 139 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 C5orf17Q8NAS9 161 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 PCNPQ8WW12 178 aaKnown RBP6.6□□□□□ -1.35
VPS41-201ENST00000265745 ASB13Q8WXK3 278 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 KCNS1Q96KK3 526 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 EPDR1Q9UM22 224 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 TNFSF18Q9UNG2 199 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 LY96Q9Y6Y9 160 aa6.6□□□□□ -1.35
VPS41-201ENST00000265745 LOC100131303A0A0U1RQF7 123 aa6.59□□□□□ -1.35
VPS41-201ENST00000265745 DNAH10OSP0CZ25 163 aa6.59□□□□□ -1.35
VPS41-201ENST00000265745 GATA1P15976 413 aaPredicted RBP6.59□□□□□ -1.35
VPS41-201ENST00000265745 SH2D6Q7Z4S9 175 aa6.59□□□□□ -1.35
VPS41-201ENST00000265745 NFE4Q86UQ8 179 aa6.59□□□□□ -1.35
VPS41-201ENST00000265745 WFDC10BQ8IUB3 73 aa6.59□□□□□ -1.35
VPS41-201ENST00000265745 TXNDC17Q9BRA2 123 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms