RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 SLC50A1Q9BRV3 221 aa9.51□□□□□ -0.89
CHMP3-201ENST00000263856 F6UB75 175 aa9.51□□□□□ -0.89
CHMP3-201ENST00000263856 ETDBQ3ZM63 59 aa9.51□□□□□ -0.89
CHMP3-201ENST00000263856 CSPG4Q6UVK1 2322 aa9.5□□□□□ -0.89
CHMP3-201ENST00000263856 EEF1AKMT3Q96AZ1 226 aa9.5□□□□□ -0.89
CHMP3-201ENST00000263856 OR11H12B2RN74 326 aa9.5□□□□□ -0.89
CHMP3-201ENST00000263856 LY6EQ16553 131 aa9.5□□□□□ -0.89
CHMP3-201ENST00000263856 SCGB1D4Q6XE38 83 aa9.5□□□□□ -0.89
CHMP3-201ENST00000263856 OR11H1Q8NG94 326 aa9.5□□□□□ -0.89
CHMP3-201ENST00000263856 OR11H2Q8NH07 326 aa9.5□□□□□ -0.89
CHMP3-201ENST00000263856 FAM110DQ8TAY7 271 aaPredicted RBP9.5□□□□□ -0.89
CHMP3-201ENST00000263856 ZNF48Q96MX3 618 aaPredicted RBP9.5□□□□□ -0.89
CHMP3-201ENST00000263856 PHLDA3Q9Y5J5 127 aa9.5□□□□□ -0.89
CHMP3-201ENST00000263856 CREBBPQ92793 2442 aa9.49□□□□□ -0.89
CHMP3-201ENST00000263856 TRAV8-2A0A0B4J237 113 aa9.49□□□□□ -0.89
CHMP3-201ENST00000263856 SRSF1Q07955 248 aaKnown RBP eCLIP9.49□□□□□ -0.89
CHMP3-201ENST00000263856 SPTBN4Q9H254 2564 aa9.49□□□□□ -0.89
CHMP3-201ENST00000263856 IGHV7-4-1A0A0J9YVY3 117 aa9.49□□□□□ -0.89
CHMP3-201ENST00000263856 CLPSL1A2RUU4 121 aa9.49□□□□□ -0.89
CHMP3-201ENST00000263856 TGFAP01135 160 aa9.49□□□□□ -0.89
CHMP3-201ENST00000263856 BRD3OSQ6XYD6 125 aa9.49□□□□□ -0.89
CHMP3-201ENST00000263856 RNASE4P34096 147 aaKnown RBP9.49□□□□□ -0.89
CHMP3-201ENST00000263856 CHTOPQ9Y3Y2 248 aaKnown RBP9.49□□□□□ -0.89
CHMP3-201ENST00000263856 VPS13CQ709C8 3753 aa9.48□□□□□ -0.89
CHMP3-201ENST00000263856 TRBV12-3P01733 135 aa9.48□□□□□ -0.89
CHMP3-201ENST00000263856 ARL3P36405 182 aa9.48□□□□□ -0.89
CHMP3-201ENST00000263856 ATP5G2Q06055 141 aa9.48□□□□□ -0.89
CHMP3-201ENST00000263856 Q8N6K4 173 aa9.48□□□□□ -0.89
CHMP3-201ENST00000263856 NRACQ8N912 160 aa9.48□□□□□ -0.89
CHMP3-201ENST00000263856 TSSC4Q9Y5U2 329 aaPredicted RBP9.48□□□□□ -0.89
CHMP3-201ENST00000263856 IGLL5B9A064 214 aa9.48□□□□□ -0.89
CHMP3-201ENST00000263856 C12orf74Q32Q52 190 aa9.48□□□□□ -0.89
CHMP3-201ENST00000263856 A0A087WX48 190 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 ADORA2A-AS1P86434 159 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 SAMD13Q5VXD3 122 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 C20orf173Q96LM9 149 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 BPESC1Q9GZL8 116 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 IGLV2-18A0A075B6J9 118 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 LOC107984156A0A0G2JMH3 177 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 SRSF9Q13242 221 aaKnown RBP eCLIP9.47□□□□□ -0.89
CHMP3-201ENST00000263856 CD300EQ496F6 205 aaPredicted RBP9.47□□□□□ -0.89
CHMP3-201ENST00000263856 MINOS1Q5TGZ0 78 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 COX8CQ7Z4L0 72 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 ARL17AQ8IVW1 177 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 SMIM2Q9BVW6 85 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 CNFNQ9BYD5 112 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 ZMAT4Q9H898 229 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 RAXQ9Y2V3 346 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 MINOS1-NBL1R4GNA1 71 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 K7ENP7 123 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 GNRH2O43555 120 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 APOMO95445 188 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 RAB9AP51151 201 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 UNQ9165/PRO28630Q6UXU0 137 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 TMEM190Q8WZ59 177 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 SMPXQ9UHP9 88 aa9.47□□□□□ -0.89
CHMP3-201ENST00000263856 A0A1W2PPR1 153 aa9.46□□□□□ -0.89
CHMP3-201ENST00000263856 F5H697 171 aa9.46□□□□□ -0.89
CHMP3-201ENST00000263856 IGKV3-20P01619 116 aa9.46□□□□□ -0.9
CHMP3-201ENST00000263856 ANXA2RQ3ZCQ2 193 aa9.46□□□□□ -0.9
CHMP3-201ENST00000263856 OR10J6PQ8NGY7 276 aa9.46□□□□□ -0.9
CHMP3-201ENST00000263856 HIGD1BQ9P298 99 aa9.46□□□□□ -0.9
CHMP3-201ENST00000263856 SUMO2P61956 95 aaKnown RBP9.45□□□□□ -0.9
CHMP3-201ENST00000263856 ZNF815PA8K554 130 aa9.45□□□□□ -0.9
CHMP3-201ENST00000263856 F8VRH5 84 aa9.45□□□□□ -0.9
CHMP3-201ENST00000263856 H7C1H1 209 aa9.45□□□□□ -0.9
CHMP3-201ENST00000263856 AZU1P20160 251 aa9.45□□□□□ -0.9
CHMP3-201ENST00000263856 C2orf66Q6UXQ4 117 aa9.45□□□□□ -0.9
CHMP3-201ENST00000263856 KLHL30-AS1Q8NEE0 82 aa9.45□□□□□ -0.9
CHMP3-201ENST00000263856 MRPL16Q9NX20 251 aaKnown RBP9.45□□□□□ -0.9
CHMP3-201ENST00000263856 A0A1B0GWB2 263 aa9.45□□□□□ -0.9
CHMP3-201ENST00000263856 PLNP26678 52 aa9.45□□□□□ -0.9
CHMP3-201ENST00000263856 FAM74A4Q5TZK3 123 aa9.45□□□□□ -0.9
CHMP3-201ENST00000263856 ZNF418Q8TF45 676 aaPredicted RBP9.45□□□□□ -0.9
CHMP3-201ENST00000263856 SIRPDQ9H106 197 aa9.45□□□□□ -0.9
CHMP3-201ENST00000263856 RBAKDNA6NC62 111 aa9.44□□□□□ -0.9
CHMP3-201ENST00000263856 ASIPP42127 132 aa9.44□□□□□ -0.9
CHMP3-201ENST00000263856 PHLDA1Q8WV24 401 aaPredicted RBP9.44□□□□□ -0.9
CHMP3-201ENST00000263856 PGPEP1Q9NXJ5 209 aa9.44□□□□□ -0.9
CHMP3-201ENST00000263856 PF4V1P10720 104 aa9.44□□□□□ -0.9
CHMP3-201ENST00000263856 HLA-DRB4P13762 266 aa9.44□□□□□ -0.9
CHMP3-201ENST00000263856 INSL3P51460 131 aa9.44□□□□□ -0.9
CHMP3-201ENST00000263856 PRADC1Q9BSG0 188 aa9.44□□□□□ -0.9
CHMP3-201ENST00000263856 HLA-DRB4X5D2U9 266 aa9.44□□□□□ -0.9
CHMP3-201ENST00000263856 A0A087WWL8 130 aa9.43□□□□□ -0.9
CHMP3-201ENST00000263856 TRAV41A0A0B4J266 112 aa9.43□□□□□ -0.9
CHMP3-201ENST00000263856 SLC25A16P16260 332 aa9.43□□□□□ -0.9
CHMP3-201ENST00000263856 FOXI2Q6ZQN5 318 aa9.43□□□□□ -0.9
CHMP3-201ENST00000263856 JPT2Q9H910 190 aa9.43□□□□□ -0.9
CHMP3-201ENST00000263856 MYMXA0A1B0GTQ4 84 aa9.43□□□□□ -0.9
CHMP3-201ENST00000263856 OOSP1A8MZH6 123 aa9.43□□□□□ -0.9
CHMP3-201ENST00000263856 NPFFO15130 113 aa9.43□□□□□ -0.9
CHMP3-201ENST00000263856 UBE2E1P51965 193 aa9.43□□□□□ -0.9
CHMP3-201ENST00000263856 SRSF2Q01130 221 aaKnown RBP9.43□□□□□ -0.9
CHMP3-201ENST00000263856 GAGE13Q4V321 117 aa9.43□□□□□ -0.9
CHMP3-201ENST00000263856 RASL10AQ92737 203 aa9.43□□□□□ -0.9
CHMP3-201ENST00000263856 TM2D2Q9BX73 214 aa9.43□□□□□ -0.9
CHMP3-201ENST00000263856 CENPVL3A0A0U1RRI6 287 aa9.42□□□□□ -0.9
CHMP3-201ENST00000263856 EBI3Q14213 229 aa9.42□□□□□ -0.9
CHMP3-201ENST00000263856 C11orf71Q6IPW1 123 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms