RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 TMEM61Q8N0U2 210 aa11.8□□□□□ -0.52
VPS26A-201ENST00000263559 CNFNQ9BYD5 112 aa11.8□□□□□ -0.52
VPS26A-201ENST00000263559 NAGKQ9UJ70 344 aa11.8□□□□□ -0.52
VPS26A-201ENST00000263559 WNK1Q9H4A3 2382 aa11.8□□□□□ -0.52
VPS26A-201ENST00000263559 KLLNB2CW77 178 aa11.79□□□□□ -0.52
VPS26A-201ENST00000263559 PROK1P58294 105 aa11.79□□□□□ -0.52
VPS26A-201ENST00000263559 DEFB114Q30KQ6 69 aa11.79□□□□□ -0.52
VPS26A-201ENST00000263559 EBLN2Q6P2I7 272 aa11.79□□□□□ -0.52
VPS26A-201ENST00000263559 DYNLRB2Q8TF09 96 aa11.79□□□□□ -0.52
VPS26A-201ENST00000263559 NIT2Q9NQR4 276 aa11.79□□□□□ -0.52
VPS26A-201ENST00000263559 SETXQ7Z333 2677 aaKnown RBP11.78□□□□□ -0.52
VPS26A-201ENST00000263559 IGKV3-20P01619 116 aa11.78□□□□□ -0.52
VPS26A-201ENST00000263559 HIVEP1P15822 2718 aa11.78□□□□□ -0.52
VPS26A-201ENST00000263559 AMN1Q8IY45 258 aa11.78□□□□□ -0.52
VPS26A-201ENST00000263559 KCNS1Q96KK3 526 aa11.78□□□□□ -0.52
VPS26A-201ENST00000263559 FOSL1P15407 271 aa11.77□□□□□ -0.52
VPS26A-201ENST00000263559 ANXA2RQ3ZCQ2 193 aa11.77□□□□□ -0.52
VPS26A-201ENST00000263559 FAM104BQ5XKR9 115 aa11.77□□□□□ -0.52
VPS26A-201ENST00000263559 CDPF1Q6NVV7 123 aa11.77□□□□□ -0.52
VPS26A-201ENST00000263559 SAMD10Q9BYL1 202 aa11.77□□□□□ -0.52
VPS26A-201ENST00000263559 CD300EQ496F6 205 aaPredicted RBP11.76□□□□□ -0.53
VPS26A-201ENST00000263559 FOXI2Q6ZQN5 318 aa11.76□□□□□ -0.53
VPS26A-201ENST00000263559 OR10AG1Q8NH19 301 aa11.76□□□□□ -0.53
VPS26A-201ENST00000263559 NSD1Q96L73 2696 aaPredicted RBP11.76□□□□□ -0.53
VPS26A-201ENST00000263559 TCF21O43680 179 aa11.76□□□□□ -0.53
VPS26A-201ENST00000263559 URB1-AS1Q96HZ7 61 aa11.76□□□□□ -0.53
VPS26A-201ENST00000263559 ODF3Q96PU9 254 aa11.76□□□□□ -0.53
VPS26A-201ENST00000263559 TRAV2A0A0B4J234 112 aa11.75□□□□□ -0.53
VPS26A-201ENST00000263559 H3BVH4 76 aa11.75□□□□□ -0.53
VPS26A-201ENST00000263559 SNAI2O43623 268 aa11.75□□□□□ -0.53
VPS26A-201ENST00000263559 OR5AL1P0C617 328 aa11.75□□□□□ -0.53
VPS26A-201ENST00000263559 DEFB131AP59861 70 aa11.75□□□□□ -0.53
VPS26A-201ENST00000263559 JOSD1Q15040 202 aaPredicted RBP11.75□□□□□ -0.53
VPS26A-201ENST00000263559 NIT1Q86X76 327 aa11.75□□□□□ -0.53
VPS26A-201ENST00000263559 TMEM191AQ9H0A3 160 aa11.75□□□□□ -0.53
VPS26A-201ENST00000263559 ADARB2-AS1A8MUL3 147 aa11.75□□□□□ -0.53
VPS26A-201ENST00000263559 LEPP41159 167 aa11.75□□□□□ -0.53
VPS26A-201ENST00000263559 FAM19A2Q8N3H0 131 aa11.75□□□□□ -0.53
VPS26A-201ENST00000263559 FN1P02751 2386 aaKnown RBP11.74□□□□□ -0.53
VPS26A-201ENST00000263559 GNRH2O43555 120 aa11.74□□□□□ -0.53
VPS26A-201ENST00000263559 DUSP14O95147 198 aaKnown RBP11.74□□□□□ -0.53
VPS26A-201ENST00000263559 PMCHP20382 165 aa11.74□□□□□ -0.53
VPS26A-201ENST00000263559 AMTP48728 403 aa11.74□□□□□ -0.53
VPS26A-201ENST00000263559 MRPL51Q4U2R6 128 aaKnown RBP11.74□□□□□ -0.53
VPS26A-201ENST00000263559 TRAV12-3A0A0B4J271 114 aa11.74□□□□□ -0.53
VPS26A-201ENST00000263559 PCP4L1A6NKN8 68 aa11.74□□□□□ -0.53
VPS26A-201ENST00000263559 KNCNA6PVL3 124 aa11.74□□□□□ -0.53
VPS26A-201ENST00000263559 M0R2Z0 102 aa11.74□□□□□ -0.53
VPS26A-201ENST00000263559 ZNF324O75467 553 aaPredicted RBP11.74□□□□□ -0.53
VPS26A-201ENST00000263559 RNASEKQ6P5S7 137 aaKnown RBP11.74□□□□□ -0.53
VPS26A-201ENST00000263559 TIMM8BQ9Y5J9 83 aaPredicted RBP11.74□□□□□ -0.53
VPS26A-201ENST00000263559 TRAV12-2A0A075B6T6 113 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 D6R8Y8 96 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 KRTAP10-3P60369 221 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 Q6ZWC4 215 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 C7orf71A4D174 169 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 ZNF124Q15973 351 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 SPINK13Q1W4C9 94 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 NSUN5P1Q3KNT7 163 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 U3KQK5 164 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 S100A4P26447 101 aaKnown RBP11.73□□□□□ -0.53
VPS26A-201ENST00000263559 ASIPP42127 132 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 CDKN1BP46527 198 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 SPANXN1Q5VSR9 72 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 AMTNQ6UX39 209 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 RNF185Q96GF1 192 aa11.73□□□□□ -0.53
VPS26A-201ENST00000263559 IGHV4-4A0A075B6R2 117 aa11.72□□□□□ -0.53
VPS26A-201ENST00000263559 SPRY2O43597 315 aa11.72□□□□□ -0.53
VPS26A-201ENST00000263559 HSBP1O75506 76 aa11.72□□□□□ -0.53
VPS26A-201ENST00000263559 DMRTA1Q5VZB9 504 aa11.72□□□□□ -0.53
VPS26A-201ENST00000263559 ZNF256Q9Y2P7 627 aaPredicted RBP11.72□□□□□ -0.53
VPS26A-201ENST00000263559 RAB4AP20338 218 aa11.72□□□□□ -0.53
VPS26A-201ENST00000263559 CACNG7P62955 275 aa11.72□□□□□ -0.53
VPS26A-201ENST00000263559 FAM159AQ6UWV7 190 aa11.72□□□□□ -0.53
VPS26A-201ENST00000263559 SPAG8Q99932 426 aaPredicted RBP11.72□□□□□ -0.53
VPS26A-201ENST00000263559 MAP6D1Q9H9H5 199 aa11.72□□□□□ -0.53
VPS26A-201ENST00000263559 SIGLEC8Q9NYZ4 499 aa11.72□□□□□ -0.53
VPS26A-201ENST00000263559 CRLF1O75462 422 aa11.71□□□□□ -0.53
VPS26A-201ENST00000263559 EVI2AP22794 236 aa11.71□□□□□ -0.53
VPS26A-201ENST00000263559 ORMDL3Q8N138 153 aa11.71□□□□□ -0.53
VPS26A-201ENST00000263559 OR4C46A6NHA9 309 aa11.71□□□□□ -0.54
VPS26A-201ENST00000263559 SMKR1H3BMG3 65 aa11.71□□□□□ -0.54
VPS26A-201ENST00000263559 LINC00614P0C842 121 aa11.71□□□□□ -0.54
VPS26A-201ENST00000263559 RNASE3P12724 160 aaKnown RBP11.71□□□□□ -0.54
VPS26A-201ENST00000263559 TSPOP30536 169 aa11.71□□□□□ -0.54
VPS26A-201ENST00000263559 PRELID3AQ96N28 172 aa11.71□□□□□ -0.54
VPS26A-201ENST00000263559 TRAV25A0A0B4J276 109 aa11.7□□□□□ -0.54
VPS26A-201ENST00000263559 H3BMM0 161 aa11.7□□□□□ -0.54
VPS26A-201ENST00000263559 HLA-DRB4P13762 266 aa11.7□□□□□ -0.54
VPS26A-201ENST00000263559 CKS2P33552 79 aa11.7□□□□□ -0.54
VPS26A-201ENST00000263559 DNLZQ5SXM8 178 aa11.7□□□□□ -0.54
VPS26A-201ENST00000263559 HLA-DRB4X5D2U9 266 aa11.7□□□□□ -0.54
VPS26A-201ENST00000263559 SCRT2Q9NQ03 307 aa11.7□□□□□ -0.54
VPS26A-201ENST00000263559 FXYD7P58549 80 aa11.69□□□□□ -0.54
VPS26A-201ENST00000263559 CHCHD1Q96BP2 118 aaKnown RBP11.69□□□□□ -0.54
VPS26A-201ENST00000263559 M0R381 172 aa11.69□□□□□ -0.54
VPS26A-201ENST00000263559 NCR2O95944 276 aa11.69□□□□□ -0.54
VPS26A-201ENST00000263559 MED14OSP0DP75 135 aa11.69□□□□□ -0.54
VPS26A-201ENST00000263559 PHLDA3Q9Y5J5 127 aa11.69□□□□□ -0.54
VPS26A-201ENST00000263559 A8MTW9 85 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms