RNA–Protein interactions for RNA: ENST00000262316.10

RHBDF1-201, Transcript of rhomboid 5 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDF1, Length 2,992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-201ENST00000262316 KHDC1LQ5JSQ8 128 aa12.99□□□□□ -0.33
RHBDF1-201ENST00000262316 CHCHD1Q96BP2 118 aaKnown RBP12.99□□□□□ -0.33
RHBDF1-201ENST00000262316 ZNF688P0C7X2 276 aa12.98□□□□□ -0.33
RHBDF1-201ENST00000262316 SPANXN1Q5VSR9 72 aa12.98□□□□□ -0.33
RHBDF1-201ENST00000262316 PEF1Q9UBV8 284 aaKnown RBP12.98□□□□□ -0.33
RHBDF1-201ENST00000262316 SLC25A16P16260 332 aa12.98□□□□□ -0.33
RHBDF1-201ENST00000262316 HNRNPA3P51991 378 aaKnown RBP12.98□□□□□ -0.33
RHBDF1-201ENST00000262316 ANKRD39Q53RE8 183 aa12.97□□□□□ -0.33
RHBDF1-201ENST00000262316 Q6AWC8 147 aa12.97□□□□□ -0.33
RHBDF1-201ENST00000262316 USMG5Q96IX5 58 aa12.97□□□□□ -0.33
RHBDF1-201ENST00000262316 MAP1LC3CQ9BXW4 147 aa12.97□□□□□ -0.33
RHBDF1-201ENST00000262316 A0A096LNT2 108 aa12.97□□□□□ -0.33
RHBDF1-201ENST00000262316 ERASQ7Z444 233 aa12.97□□□□□ -0.33
RHBDF1-201ENST00000262316 ARL6IP6Q8N6S5 226 aa12.97□□□□□ -0.33
RHBDF1-201ENST00000262316 OR10J6PQ8NGY7 276 aa12.97□□□□□ -0.33
RHBDF1-201ENST00000262316 IGLV1-40P01703 118 aa12.96□□□□□ -0.33
RHBDF1-201ENST00000262316 IGHV4-31P0DP07 118 aa12.96□□□□□ -0.33
RHBDF1-201ENST00000262316 S100A4P26447 101 aaKnown RBP12.96□□□□□ -0.33
RHBDF1-201ENST00000262316 RNF185Q96GF1 192 aa12.96□□□□□ -0.33
RHBDF1-201ENST00000262316 JMJD1CQ15652 2540 aa12.96□□□□□ -0.33
RHBDF1-201ENST00000262316 TRAV9-2A0A087WT02 112 aa12.96□□□□□ -0.33
RHBDF1-201ENST00000262316 TMEM190Q8WZ59 177 aa12.96□□□□□ -0.33
RHBDF1-201ENST00000262316 A0A096LNJ9 63 aa12.96□□□□□ -0.34
RHBDF1-201ENST00000262316 A0A0G2JLM5 398 aa12.96□□□□□ -0.34
RHBDF1-201ENST00000262316 IGHV7-4-1A0A0J9YVY3 117 aa12.96□□□□□ -0.34
RHBDF1-201ENST00000262316 FASNP49327 2511 aaKnown RBP12.95□□□□□ -0.34
RHBDF1-201ENST00000262316 DAZ1Q9NQZ3 744 aaKnown RBP12.95□□□□□ -0.34
RHBDF1-201ENST00000262316 TRAV12-2A0A075B6T6 113 aa12.95□□□□□ -0.34
RHBDF1-201ENST00000262316 ZNF493Q6ZR52 646 aa12.95□□□□□ -0.34
RHBDF1-201ENST00000262316 ANXA2RQ3ZCQ2 193 aa12.94□□□□□ -0.34
RHBDF1-201ENST00000262316 UQCR10Q9UDW1 63 aa12.94□□□□□ -0.34
RHBDF1-201ENST00000262316 RPS20P60866 119 aaKnown RBP12.94□□□□□ -0.34
RHBDF1-201ENST00000262316 KLK9Q2XQG4 91 aa12.94□□□□□ -0.34
RHBDF1-201ENST00000262316 ZNF747Q9BV97 191 aa12.94□□□□□ -0.34
RHBDF1-201ENST00000262316 KLK9Q9UKQ9 250 aa12.94□□□□□ -0.34
RHBDF1-201ENST00000262316 HTN1P15515 57 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 CRIP2P52943 208 aaPredicted RBP12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 DSCR9P59020 149 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 LINC01559Q495D7 138 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 PSMG4Q5JS54 123 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 COL5A1-AS1Q5SY13 56 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 C9orf47Q6ZRZ4 202 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 C9orf139Q6ZV77 190 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 STPG4Q8N801 248 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 RNASE8Q8TDE3 154 aaKnown RBP12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 SMPXQ9UHP9 88 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 WFDC11Q8NEX6 87 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 TNFRSF6BO95407 300 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 PSMB8P28062 276 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 ZFAND2AQ8N6M9 145 aa12.93□□□□□ -0.34
RHBDF1-201ENST00000262316 CACNG7P62955 275 aa12.92□□□□□ -0.34
RHBDF1-201ENST00000262316 DEFB113Q30KQ7 82 aa12.92□□□□□ -0.34
RHBDF1-201ENST00000262316 C14orf178Q8N769 122 aaPredicted RBP12.92□□□□□ -0.34
RHBDF1-201ENST00000262316 IGHV4OR15-8A0A075B7B6 117 aa12.92□□□□□ -0.34
RHBDF1-201ENST00000262316 A0A087WW49 117 aa12.92□□□□□ -0.34
RHBDF1-201ENST00000262316 TRAV12-3A0A0B4J271 114 aa12.92□□□□□ -0.34
RHBDF1-201ENST00000262316 RBAKDNA6NC62 111 aa12.92□□□□□ -0.34
RHBDF1-201ENST00000262316 TMEM191AQ9H0A3 160 aa12.92□□□□□ -0.34
RHBDF1-201ENST00000262316 CR1P17927 2039 aa12.91□□□□□ -0.34
RHBDF1-201ENST00000262316 A0A1B0GW15 77 aa12.91□□□□□ -0.34
RHBDF1-201ENST00000262316 FBLL1A6NHQ2 334 aaKnown RBP12.91□□□□□ -0.34
RHBDF1-201ENST00000262316 COX8CQ7Z4L0 72 aa12.91□□□□□ -0.34
RHBDF1-201ENST00000262316 JPT2Q9H910 190 aa12.91□□□□□ -0.34
RHBDF1-201ENST00000262316 HSPB8Q9UJY1 196 aa12.91□□□□□ -0.34
RHBDF1-201ENST00000262316 SOCS3O14543 225 aa12.91□□□□□ -0.34
RHBDF1-201ENST00000262316 MGPP08493 103 aa12.91□□□□□ -0.34
RHBDF1-201ENST00000262316 TSPOP30536 169 aa12.91□□□□□ -0.34
RHBDF1-201ENST00000262316 LEPP41159 167 aa12.91□□□□□ -0.34
RHBDF1-201ENST00000262316 CFHR3Q02985 330 aa12.91□□□□□ -0.34
RHBDF1-201ENST00000262316 PSMG3-AS1Q96PY0 264 aa12.91□□□□□ -0.34
RHBDF1-201ENST00000262316 C20orf202A1L168 122 aa12.9□□□□□ -0.34
RHBDF1-201ENST00000262316 KLHDC1Q8N7A1 406 aa12.9□□□□□ -0.34
RHBDF1-201ENST00000262316 PRM2P04554 102 aa12.9□□□□□ -0.34
RHBDF1-201ENST00000262316 PTTG1IPP53801 180 aa12.9□□□□□ -0.34
RHBDF1-201ENST00000262316 GATA3P23771 443 aa12.9□□□□□ -0.35
RHBDF1-201ENST00000262316 SLURP1P55000 103 aa12.9□□□□□ -0.35
RHBDF1-201ENST00000262316 COTL1Q14019 142 aa12.9□□□□□ -0.35
RHBDF1-201ENST00000262316 LAMTOR2Q9Y2Q5 125 aa12.9□□□□□ -0.35
RHBDF1-201ENST00000262316 NEGR1Q7Z3B1 354 aa12.89□□□□□ -0.35
RHBDF1-201ENST00000262316 VPREB3Q9UKI3 123 aa12.89□□□□□ -0.35
RHBDF1-201ENST00000262316 MS4A6AQ9H2W1 248 aa12.89□□□□□ -0.35
RHBDF1-201ENST00000262316 DKK2Q9UBU2 259 aa12.89□□□□□ -0.35
RHBDF1-201ENST00000262316 C2CD3Q4AC94 2353 aa12.88□□□□□ -0.35
RHBDF1-201ENST00000262316 HSBP1L1C9JCN9 74 aa12.88□□□□□ -0.35
RHBDF1-201ENST00000262316 MAP1LC3AQ9H492 121 aa12.88□□□□□ -0.35
RHBDF1-201ENST00000262316 PHLDA3Q9Y5J5 127 aa12.88□□□□□ -0.35
RHBDF1-201ENST00000262316 A0A1W2PRX2 142 aa12.88□□□□□ -0.35
RHBDF1-201ENST00000262316 CCL25O15444 150 aa12.88□□□□□ -0.35
RHBDF1-201ENST00000262316 U3KQK5 164 aa12.88□□□□□ -0.35
RHBDF1-201ENST00000262316 NACAE9PAV3 2078 aa12.88□□□□□ -0.35
RHBDF1-201ENST00000262316 RBX1P62877 108 aa12.87□□□□□ -0.35
RHBDF1-201ENST00000262316 MRPL52Q86TS9 123 aaKnown RBP12.87□□□□□ -0.35
RHBDF1-201ENST00000262316 LINC00477Q96M19 166 aa12.87□□□□□ -0.35
RHBDF1-201ENST00000262316 RPL39LQ96EH5 51 aaKnown RBP12.87□□□□□ -0.35
RHBDF1-201ENST00000262316 HOXD3P31249 432 aaPredicted RBP12.87□□□□□ -0.35
RHBDF1-201ENST00000262316 RNF151Q2KHN1 245 aa12.87□□□□□ -0.35
RHBDF1-201ENST00000262316 SMIM15Q7Z3B0 74 aa12.87□□□□□ -0.35
RHBDF1-201ENST00000262316 GATD1Q8NB37 220 aa12.87□□□□□ -0.35
RHBDF1-201ENST00000262316 TMEM158Q8WZ71 300 aa12.87□□□□□ -0.35
RHBDF1-201ENST00000262316 ZNF702PQ9H963 129 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms