RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 hDV102S1A0JD36 115 aa10.55□□□□□ -0.72
PDGFRB-201ENST00000261799 ZC2HC1AQ96GY0 325 aa10.55□□□□□ -0.72
PDGFRB-201ENST00000261799 INTS1Q8N201 2190 aaKnown RBP10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 PI4KAP42356 2102 aa10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 GUSBP1Q15486 140 aa10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 FAM186AA6NE01 2351 aa10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 TRBV24-1A0A075B6N3 115 aa10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 I3L2K1 104 aa10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 Q0VG73 95 aa10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 KIF26AQ9ULI4 1882 aaPredicted RBP10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 TRAV13-2A0A0B4J235 113 aa10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 GAGE2BQ13066 116 aa10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 AMTNQ6UX39 209 aa10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 SAMD5Q5TGI4 173 aa10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 GVINP1Q7Z2Y8 2422 aa10.54□□□□□ -0.72
PDGFRB-201ENST00000261799 HLA-DMBP28068 263 aa10.53□□□□□ -0.72
PDGFRB-201ENST00000261799 LINC00518Q8N0U6 118 aa10.53□□□□□ -0.72
PDGFRB-201ENST00000261799 RITA1Q96K30 269 aa10.53□□□□□ -0.72
PDGFRB-201ENST00000261799 AGPAT4-IT1Q9H0P7 198 aa10.53□□□□□ -0.72
PDGFRB-201ENST00000261799 FER1L5A0AVI2 2057 aa10.53□□□□□ -0.72
PDGFRB-201ENST00000261799 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.53□□□□□ -0.72
PDGFRB-201ENST00000261799 IGKV2-29A2NJV5 120 aaPredicted RBP10.53□□□□□ -0.72
PDGFRB-201ENST00000261799 ZC2HC1BQ5TFG8 222 aa10.53□□□□□ -0.72
PDGFRB-201ENST00000261799 ZNF318Q5VUA4 2279 aa10.53□□□□□ -0.72
PDGFRB-201ENST00000261799 C1orf147Q96MC9 270 aaPredicted RBP10.53□□□□□ -0.72
PDGFRB-201ENST00000261799 FNDC4Q9H6D8 234 aaPredicted RBP10.53□□□□□ -0.72
PDGFRB-201ENST00000261799 NDUFS5O43920 106 aa10.52□□□□□ -0.72
PDGFRB-201ENST00000261799 SLC25A29Q8N8R3 303 aa10.52□□□□□ -0.72
PDGFRB-201ENST00000261799 NDUFA12Q9UI09 145 aa10.52□□□□□ -0.72
PDGFRB-201ENST00000261799 LMO4P61968 165 aa10.52□□□□□ -0.73
PDGFRB-201ENST00000261799 SYS1-DBNDD2H3BUS1 97 aa10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 SOCS3O14543 225 aa10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 STPG4Q8N801 248 aa10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 SPANXA1Q9NS26 97 aa10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 NDUFA1O15239 70 aa10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 TMEM131Q92545 1883 aa10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 IGLV10-54A0A075B6I4 117 aa10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 DSCR8Q96T75 97 aa10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 RSPO3Q9BXY4 272 aaPredicted RBP10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 MEGF9Q9H1U4 602 aa10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 CNOT1A5YKK6 2376 aaKnown RBP10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 CTSGP08311 255 aa10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 RNASE13Q5GAN3 156 aaKnown RBP10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 DEFB105AQ8NG35 78 aa10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 C17orf77Q96MU5 243 aa10.51□□□□□ -0.73
PDGFRB-201ENST00000261799 LTAP01374 205 aa10.5□□□□□ -0.73
PDGFRB-201ENST00000261799 GAGE2AQ6NT46 116 aa10.5□□□□□ -0.73
PDGFRB-201ENST00000261799 K7EIM0 57 aa10.5□□□□□ -0.73
PDGFRB-201ENST00000261799 TMEM263Q8WUH6 116 aaKnown RBP10.5□□□□□ -0.73
PDGFRB-201ENST00000261799 FAM231DQ6ZW35 169 aa10.5□□□□□ -0.73
PDGFRB-201ENST00000261799 COX11Q9Y6N1 276 aa10.5□□□□□ -0.73
PDGFRB-201ENST00000261799 MAP6D1Q9H9H5 199 aa10.5□□□□□ -0.73
PDGFRB-201ENST00000261799 ADAMTS9Q9P2N4 1935 aa10.49□□□□□ -0.73
PDGFRB-201ENST00000261799 HERV-K104P63124 156 aa10.49□□□□□ -0.73
PDGFRB-201ENST00000261799 SMIM9A6NGZ8 99 aa10.49□□□□□ -0.73
PDGFRB-201ENST00000261799 CRYGCP07315 174 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 TIMM17AQ99595 171 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 FREM3P0C091 2139 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 HIST1H2BKO60814 126 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 HIST1H2BJP06899 126 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 HIST1H2BOP23527 126 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 HIST1H2BBP33778 126 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 HIST1H2BDP58876 126 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 HIST1H2BCP62807 126 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 HIST2H2BEQ16778 126 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 HIST1H2BHQ93079 126 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 HIST1H2BNQ99877 126 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 HIST1H2BMQ99879 126 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 CXCL1P09341 107 aa10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 YLPM1P49750 1951 aaKnown RBP10.48□□□□□ -0.73
PDGFRB-201ENST00000261799 DEFB131BA0A096LNP1 70 aa10.47□□□□□ -0.73
PDGFRB-201ENST00000261799 IGHG4P01861 327 aa10.47□□□□□ -0.73
PDGFRB-201ENST00000261799 LYRM9A8MSI8 78 aa10.47□□□□□ -0.73
PDGFRB-201ENST00000261799 C5orf38Q86SI9 138 aa10.47□□□□□ -0.73
PDGFRB-201ENST00000261799 PRO0255Q9UI72 69 aa10.47□□□□□ -0.73
PDGFRB-201ENST00000261799 WI2-2373I1.2A0A1W2PRP0 233 aa10.47□□□□□ -0.73
PDGFRB-201ENST00000261799 K7EMI3 77 aa10.47□□□□□ -0.73
PDGFRB-201ENST00000261799 C2orf16Q68DN1 1984 aa10.47□□□□□ -0.73
PDGFRB-201ENST00000261799 ODF3BA8MYP8 253 aa10.47□□□□□ -0.73
PDGFRB-201ENST00000261799 B9D2Q9BPU9 175 aa10.47□□□□□ -0.73
PDGFRB-201ENST00000261799 TRAV4A0A0B4J268 109 aa10.46□□□□□ -0.73
PDGFRB-201ENST00000261799 SMIM27A0A1W2PRY6 76 aa10.46□□□□□ -0.73
PDGFRB-201ENST00000261799 IGLV1-47P01700 117 aa10.46□□□□□ -0.73
PDGFRB-201ENST00000261799 RTTNQ86VV8 2226 aa10.46□□□□□ -0.74
PDGFRB-201ENST00000261799 LGALS9O00182 355 aa10.46□□□□□ -0.74
PDGFRB-201ENST00000261799 Q6ZSV7 163 aa10.46□□□□□ -0.74
PDGFRB-201ENST00000261799 A0A1B0GV90 55 aa10.46□□□□□ -0.74
PDGFRB-201ENST00000261799 FGF23Q9GZV9 251 aaPredicted RBP10.46□□□□□ -0.74
PDGFRB-201ENST00000261799 SDK2Q58EX2 2172 aa10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 BOD1L2Q8IYS8 172 aa10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 TMEM61Q8N0U2 210 aa10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 TRBV7-3A0A075B6L6 115 aa10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 ACACAQ13085 2346 aa10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 TRAV10A0A0B4J240 114 aa10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 PRR20EP86478 221 aa10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 PRR20CP86479 221 aa10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 PRR20DP86480 221 aa10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 PRR20BP86481 221 aa10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 PRR20AP86496 221 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms