RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 C1QTNF4Q9BXJ3 329 aa12.75□□□□□ -0.37
SREBF1-201ENST00000261646 CELSR3Q9NYQ7 3312 aa12.75□□□□□ -0.37
SREBF1-201ENST00000261646 VPS13AQ96RL7 3174 aa12.75□□□□□ -0.37
SREBF1-201ENST00000261646 TRAV8-3A0A0A6YYJ7 113 aa12.75□□□□□ -0.37
SREBF1-201ENST00000261646 SLC25A20O43772 301 aa12.75□□□□□ -0.37
SREBF1-201ENST00000261646 TCF15Q12870 199 aa12.75□□□□□ -0.37
SREBF1-201ENST00000261646 DYNAPQ8N1N2 210 aa12.75□□□□□ -0.37
SREBF1-201ENST00000261646 PLEKHB2Q96CS7 222 aa12.75□□□□□ -0.37
SREBF1-201ENST00000261646 PRSS29PA6NIE9 313 aa12.74□□□□□ -0.37
SREBF1-201ENST00000261646 C10orf142B7Z368 130 aa12.74□□□□□ -0.37
SREBF1-201ENST00000261646 HIGD1BQ9P298 99 aa12.74□□□□□ -0.37
SREBF1-201ENST00000261646 MSMPQ1L6U9 139 aa12.74□□□□□ -0.37
SREBF1-201ENST00000261646 ANKRD11Q6UB99 2663 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-201ENST00000261646 SPAG8Q99932 426 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-201ENST00000261646 TOMM7Q9P0U1 55 aa12.74□□□□□ -0.37
SREBF1-201ENST00000261646 ODF1Q14990 250 aa12.73□□□□□ -0.37
SREBF1-201ENST00000261646 E7EQL1 145 aa12.73□□□□□ -0.37
SREBF1-201ENST00000261646 NTN5Q8WTR8 489 aaPredicted RBP12.73□□□□□ -0.37
SREBF1-201ENST00000261646 CTSZQ9UBR2 303 aa12.73□□□□□ -0.37
SREBF1-201ENST00000261646 NACAE9PAV3 2078 aa12.73□□□□□ -0.37
SREBF1-201ENST00000261646 PMVKQ15126 192 aa12.73□□□□□ -0.37
SREBF1-201ENST00000261646 C8orf86Q6ZUL3 223 aa12.73□□□□□ -0.37
SREBF1-201ENST00000261646 C20orf78Q9BR46 151 aa12.73□□□□□ -0.37
SREBF1-201ENST00000261646 CRYBA4P53673 196 aa12.72□□□□□ -0.37
SREBF1-201ENST00000261646 KLHL30-AS1Q8NEE0 82 aa12.72□□□□□ -0.37
SREBF1-201ENST00000261646 WDFY4Q6ZS81 3184 aa12.72□□□□□ -0.37
SREBF1-201ENST00000261646 IGHV3-73A0A0B4J1V6 119 aa12.72□□□□□ -0.37
SREBF1-201ENST00000261646 UBE2L6O14933 153 aa12.72□□□□□ -0.37
SREBF1-201ENST00000261646 CFHR4Q92496 578 aa12.72□□□□□ -0.37
SREBF1-201ENST00000261646 AGPAT4-IT1Q9H0P7 198 aa12.72□□□□□ -0.37
SREBF1-201ENST00000261646 FAM215AQ9Y5M1 114 aa12.72□□□□□ -0.37
SREBF1-201ENST00000261646 SHISA9B4DS77 424 aa12.72□□□□□ -0.37
SREBF1-201ENST00000261646 GAGE5Q13069 117 aa12.72□□□□□ -0.37
SREBF1-201ENST00000261646 GAGE6Q13070 117 aa12.72□□□□□ -0.37
SREBF1-201ENST00000261646 K7EIM0 57 aa12.71□□□□□ -0.37
SREBF1-201ENST00000261646 FCN3O75636 299 aa12.71□□□□□ -0.37
SREBF1-201ENST00000261646 CR1LQ2VPA4 569 aa12.71□□□□□ -0.37
SREBF1-201ENST00000261646 PTH2Q96A98 100 aa12.71□□□□□ -0.37
SREBF1-201ENST00000261646 I3L2K1 104 aa12.71□□□□□ -0.37
SREBF1-201ENST00000261646 C2orf91Q6ZV80 131 aa12.71□□□□□ -0.37
SREBF1-201ENST00000261646 YAE1D1Q9NRH1 226 aa12.71□□□□□ -0.37
SREBF1-201ENST00000261646 MYO9AB2RTY4 2548 aa12.71□□□□□ -0.38
SREBF1-201ENST00000261646 TRBV7-9A0A0J9YWB2 115 aa12.71□□□□□ -0.38
SREBF1-201ENST00000261646 GAGE12JA6NER3 117 aa12.71□□□□□ -0.38
SREBF1-201ENST00000261646 VWC2LB2RUY7 222 aa12.71□□□□□ -0.38
SREBF1-201ENST00000261646 GAGE7O76087 117 aa12.71□□□□□ -0.38
SREBF1-201ENST00000261646 GAGE12FP0CL80 117 aa12.71□□□□□ -0.38
SREBF1-201ENST00000261646 GAGE12GP0CL81 117 aa12.71□□□□□ -0.38
SREBF1-201ENST00000261646 GAGE12IP0CL82 117 aa12.71□□□□□ -0.38
SREBF1-201ENST00000261646 GAGE4Q13068 117 aa12.71□□□□□ -0.38
SREBF1-201ENST00000261646 DUX3Q96PT4 197 aa12.71□□□□□ -0.38
SREBF1-201ENST00000261646 TRAV41A0A0B4J266 112 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 Q6ZS92 163 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 C1orf159Q96HA4 380 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 CHD8Q9HCK8 2581 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 G3V318 75 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 IFITM1P13164 125 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 FOXI1Q12951 378 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 PLA2G2CQ5R387 149 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 H3BMM0 161 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 CGB3P0DN86 165 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 CGB7P0DN87 165 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 UBE2WQ96B02 151 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 DUX5Q96PT3 197 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 FOXE3Q13461 319 aa12.7□□□□□ -0.38
SREBF1-201ENST00000261646 SDHAF1A6NFY7 115 aa12.69□□□□□ -0.38
SREBF1-201ENST00000261646 SPRY4Q9C004 299 aa12.69□□□□□ -0.38
SREBF1-201ENST00000261646 DKK4Q9UBT3 224 aa12.69□□□□□ -0.38
SREBF1-201ENST00000261646 ATG2AQ2TAZ0 1938 aa12.69□□□□□ -0.38
SREBF1-201ENST00000261646 TIMM21Q9BVV7 248 aa12.69□□□□□ -0.38
SREBF1-201ENST00000261646 PRSS33Q8NF86 280 aa12.69□□□□□ -0.38
SREBF1-201ENST00000261646 J3QQQ9 107 aa12.68□□□□□ -0.38
SREBF1-201ENST00000261646 INS-IGF2F8WCM5 200 aa12.67□□□□□ -0.38
SREBF1-201ENST00000261646 ATP6V0E1O15342 81 aa12.67□□□□□ -0.38
SREBF1-201ENST00000261646 IGLV2-23P01705 113 aa12.67□□□□□ -0.38
SREBF1-201ENST00000261646 TEN1Q86WV5 123 aa12.67□□□□□ -0.38
SREBF1-201ENST00000261646 SORL1Q92673 2214 aa12.67□□□□□ -0.38
SREBF1-201ENST00000261646 IGKV2D-26A0A0A0MRZ7 120 aa12.67□□□□□ -0.38
SREBF1-201ENST00000261646 TRBV7-1A0A0A6YYK4 115 aa12.67□□□□□ -0.38
SREBF1-201ENST00000261646 OOSP1A8MZH6 123 aa12.67□□□□□ -0.38
SREBF1-201ENST00000261646 SETD2Q9BYW2 2564 aaPredicted RBP12.67□□□□□ -0.38
SREBF1-201ENST00000261646 THBDP07204 575 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 CRYGCP07315 174 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 MINOS1Q5TGZ0 78 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 C15orf53Q8NAA6 179 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 ZNF625Q96I27 306 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-201ENST00000261646 MINOS1-NBL1R4GNA1 71 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 SPTBN4Q9H254 2564 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 LRP4O75096 1905 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 CEP192Q8TEP8 1941 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 SMIM20Q8N5G0 67 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 URB1-AS1Q96HZ7 61 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 NCKAP5O14513 1909 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 ADARB2-AS1A8MUL3 147 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 ZNF493Q6ZR52 646 aa12.66□□□□□ -0.38
SREBF1-201ENST00000261646 RPL39LQ96EH5 51 aaKnown RBP12.66□□□□□ -0.38
SREBF1-201ENST00000261646 CCDC168Q8NDH2 2452 aa12.65□□□□□ -0.38
SREBF1-201ENST00000261646 TMEM101Q96IK0 257 aa12.65□□□□□ -0.38
SREBF1-201ENST00000261646 RHPN1-AS1Q9BWJ2 59 aa12.65□□□□□ -0.38
SREBF1-201ENST00000261646 M0R1W7 72 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms