RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 EDN2P20800 178 aa13.32□□□□□ -0.28
SSB-201ENST00000260956 FOXE3Q13461 319 aa13.32□□□□□ -0.28
SSB-201ENST00000260956 TM4SF20Q53R12 229 aa13.32□□□□□ -0.28
SSB-201ENST00000260956 Q6ZQT7 251 aa13.32□□□□□ -0.28
SSB-201ENST00000260956 APRG1Q8IVJ8 170 aa13.32□□□□□ -0.28
SSB-201ENST00000260956 TMEM191AQ9H0A3 160 aa13.32□□□□□ -0.28
SSB-201ENST00000260956 DAZ1Q9NQZ3 744 aaKnown RBP13.32□□□□□ -0.28
SSB-201ENST00000260956 ORM1P02763 201 aa13.31□□□□□ -0.28
SSB-201ENST00000260956 RHPN1-AS1Q9BWJ2 59 aa13.31□□□□□ -0.28
SSB-201ENST00000260956 MSRB1Q9NZV6 116 aa13.31□□□□□ -0.28
SSB-201ENST00000260956 PAM16Q9Y3D7 125 aa13.31□□□□□ -0.28
SSB-201ENST00000260956 A0A096LNJ9 63 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 MUC21A0A0G2JKD1 596 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 MUC21A0A140T8X8 626 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 D6R8Y8 96 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 EREGO14944 169 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 BTF3P20290 206 aaKnown RBP13.3□□□□□ -0.28
SSB-201ENST00000260956 RAB4AP20338 218 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 MUC21Q5SSG8 566 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 RNF152Q8N8N0 203 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 OVOL1O14753 267 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 OR5AL1P0C617 328 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 ZNF738Q8NE65 137 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 MIEN1Q9BRT3 115 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 C2orf88Q9BSF0 95 aa13.3□□□□□ -0.28
SSB-201ENST00000260956 SNAI2O43623 268 aa13.29□□□□□ -0.28
SSB-201ENST00000260956 IGHV4-4A0A075B6R2 117 aa13.28□□□□□ -0.28
SSB-201ENST00000260956 ORMDL3Q8N138 153 aa13.28□□□□□ -0.28
SSB-201ENST00000260956 Q8N2B8 174 aa13.28□□□□□ -0.28
SSB-201ENST00000260956 LINC00477Q96M19 166 aa13.28□□□□□ -0.28
SSB-201ENST00000260956 SIGLEC8Q9NYZ4 499 aa13.28□□□□□ -0.28
SSB-201ENST00000260956 TRBV7-9A0A0J9YWB2 115 aa13.27□□□□□ -0.28
SSB-201ENST00000260956 DEFB1P60022 68 aa13.27□□□□□ -0.28
SSB-201ENST00000260956 DCANP1Q8TF63 244 aa13.27□□□□□ -0.28
SSB-201ENST00000260956 PRELID3AQ96N28 172 aa13.27□□□□□ -0.28
SSB-201ENST00000260956 TMEM70Q9BUB7 260 aa13.27□□□□□ -0.28
SSB-201ENST00000260956 TRRAPQ9Y4A5 3859 aa13.27□□□□□ -0.29
SSB-201ENST00000260956 LINC01546A6NGU7 62 aa13.27□□□□□ -0.29
SSB-201ENST00000260956 SYS1-DBNDD2H3BUS1 97 aa13.27□□□□□ -0.29
SSB-201ENST00000260956 NPYP01303 97 aa13.27□□□□□ -0.29
SSB-201ENST00000260956 RPLP1P05386 114 aaKnown RBP13.27□□□□□ -0.29
SSB-201ENST00000260956 TWIST1Q15672 202 aa13.27□□□□□ -0.29
SSB-201ENST00000260956 FAM106AQ4KMX7 169 aa13.27□□□□□ -0.29
SSB-201ENST00000260956 Q6ZSV7 163 aa13.27□□□□□ -0.29
SSB-201ENST00000260956 MRPL52Q86TS9 123 aaKnown RBP13.27□□□□□ -0.29
SSB-201ENST00000260956 SNHG12Q9BXW3 62 aa13.27□□□□□ -0.29
SSB-201ENST00000260956 AP5S1Q9NUS5 200 aa13.27□□□□□ -0.29
SSB-201ENST00000260956 LEPROTL1O95214 131 aa13.26□□□□□ -0.29
SSB-201ENST00000260956 CSN3P07498 182 aa13.26□□□□□ -0.29
SSB-201ENST00000260956 SPATA45Q537H7 98 aa13.26□□□□□ -0.29
SSB-201ENST00000260956 LBHQ53QV2 105 aaPredicted RBP13.26□□□□□ -0.29
SSB-201ENST00000260956 OR8A1Q8NGG7 326 aa13.26□□□□□ -0.29
SSB-201ENST00000260956 VWFP04275 2813 aa13.25□□□□□ -0.29
SSB-201ENST00000260956 ELANEP08246 267 aa13.25□□□□□ -0.29
SSB-201ENST00000260956 IGLC3P0DOY3 106 aa13.25□□□□□ -0.29
SSB-201ENST00000260956 IFI27P40305 119 aaPredicted RBP13.25□□□□□ -0.29
SSB-201ENST00000260956 MAJINQ3KP22 176 aa13.25□□□□□ -0.29
SSB-201ENST00000260956 OR10AG1Q8NH19 301 aa13.25□□□□□ -0.29
SSB-201ENST00000260956 SMKR1H3BMG3 65 aa13.25□□□□□ -0.29
SSB-201ENST00000260956 GAS8-AS1O95177 125 aa13.25□□□□□ -0.29
SSB-201ENST00000260956 LGALS1P09382 135 aaKnown RBP13.25□□□□□ -0.29
SSB-201ENST00000260956 UFC1Q9Y3C8 167 aa13.25□□□□□ -0.29
SSB-201ENST00000260956 TRAV9-2A0A087WT02 112 aa13.24□□□□□ -0.29
SSB-201ENST00000260956 ATOH7Q8N100 152 aa13.24□□□□□ -0.29
SSB-201ENST00000260956 OR10J6PQ8NGY7 276 aa13.24□□□□□ -0.29
SSB-201ENST00000260956 LINC01006Q8NI28 216 aa13.24□□□□□ -0.29
SSB-201ENST00000260956 ZNF747Q9BV97 191 aa13.24□□□□□ -0.29
SSB-201ENST00000260956 PKD1L1Q8TDX9 2849 aa13.24□□□□□ -0.29
SSB-201ENST00000260956 F6UB75 175 aa13.23□□□□□ -0.29
SSB-201ENST00000260956 NDUFA7O95182 113 aa13.23□□□□□ -0.29
SSB-201ENST00000260956 NCR2O95944 276 aa13.23□□□□□ -0.29
SSB-201ENST00000260956 SSTP61278 116 aa13.23□□□□□ -0.29
SSB-201ENST00000260956 FA2HQ7L5A8 372 aa13.23□□□□□ -0.29
SSB-201ENST00000260956 LGALS9O00182 355 aa13.22□□□□□ -0.29
SSB-201ENST00000260956 PPBPP02775 128 aa13.22□□□□□ -0.29
SSB-201ENST00000260956 PET117Q6UWS5 81 aa13.22□□□□□ -0.29
SSB-201ENST00000260956 LAMTOR2Q9Y2Q5 125 aa13.22□□□□□ -0.29
SSB-201ENST00000260956 C20orf202A1L168 122 aa13.22□□□□□ -0.29
SSB-201ENST00000260956 KLLNB2CW77 178 aa13.22□□□□□ -0.29
SSB-201ENST00000260956 LINC01545Q5VT33 79 aa13.22□□□□□ -0.29
SSB-201ENST00000260956 SAMD13Q5VXD3 122 aa13.22□□□□□ -0.29
SSB-201ENST00000260956 DEFB125Q8N687 156 aa13.22□□□□□ -0.29
SSB-201ENST00000260956 PRSS3P2Q8NHM4 247 aa13.22□□□□□ -0.29
SSB-201ENST00000260956 SCRT2Q9NQ03 307 aa13.22□□□□□ -0.29
SSB-201ENST00000260956 HSPB8Q9UJY1 196 aa13.22□□□□□ -0.29
SSB-201ENST00000260956 IGHV4OR15-8A0A075B7B6 117 aa13.21□□□□□ -0.3
SSB-201ENST00000260956 A0A087WW49 117 aa13.21□□□□□ -0.3
SSB-201ENST00000260956 CKS2P33552 79 aa13.21□□□□□ -0.3
SSB-201ENST00000260956 KRTAP10-3P60369 221 aa13.21□□□□□ -0.3
SSB-201ENST00000260956 KIR3DS1Q14943 382 aa13.21□□□□□ -0.3
SSB-201ENST00000260956 UBE2E2Q96LR5 201 aa13.21□□□□□ -0.3
SSB-201ENST00000260956 MED14OSP0DP75 135 aa13.2□□□□□ -0.3
SSB-201ENST00000260956 IGLL1P15814 213 aa13.2□□□□□ -0.3
SSB-201ENST00000260956 SPATA3Q8NHX4 192 aa13.2□□□□□ -0.3
SSB-201ENST00000260956 C16orf95Q9H693 158 aa13.2□□□□□ -0.3
SSB-201ENST00000260956 IGLV2-18A0A075B6J9 118 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 TRAV21A0A0B4J279 112 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 OR4C46A6NHA9 309 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 CACNG7P62955 275 aa13.19□□□□□ -0.3
SSB-201ENST00000260956 HIST2H2BDQ6DRA6 164 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms