RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 PSMG4Q5JS54 123 aa20.72■□□□□ 0.91
CCM2-201ENST00000258781 FAM104BQ5XKR9 115 aa20.72■□□□□ 0.91
CCM2-201ENST00000258781 CDPF1Q6NVV7 123 aa20.72■□□□□ 0.91
CCM2-201ENST00000258781 ODF3Q96PU9 254 aa20.71■□□□□ 0.91
CCM2-201ENST00000258781 MUC21A0A0G2JKD1 596 aa20.71■□□□□ 0.91
CCM2-201ENST00000258781 MUC21A0A140T8X8 626 aa20.71■□□□□ 0.91
CCM2-201ENST00000258781 AMTP48728 403 aa20.71■□□□□ 0.91
CCM2-201ENST00000258781 MUC21Q5SSG8 566 aa20.71■□□□□ 0.91
CCM2-201ENST00000258781 DMRTA1Q5VZB9 504 aa20.71■□□□□ 0.91
CCM2-201ENST00000258781 RNF114Q9Y508 228 aa20.71■□□□□ 0.91
CCM2-201ENST00000258781 Q6ZQT7 251 aa20.7■□□□□ 0.9
CCM2-201ENST00000258781 Q6ZWC4 215 aa20.7■□□□□ 0.9
CCM2-201ENST00000258781 OR5AL1P0C617 328 aa20.69■□□□□ 0.9
CCM2-201ENST00000258781 CD28P10747 220 aa20.69■□□□□ 0.9
CCM2-201ENST00000258781 PROK1P58294 105 aa20.69■□□□□ 0.9
CCM2-201ENST00000258781 DLX4Q92988 240 aaPredicted RBP20.69■□□□□ 0.9
CCM2-201ENST00000258781 DUX3Q96PT4 197 aa20.69■□□□□ 0.9
CCM2-201ENST00000258781 TMEM191AQ9H0A3 160 aa20.69■□□□□ 0.9
CCM2-201ENST00000258781 TRAV2A0A0B4J234 112 aa20.69■□□□□ 0.9
CCM2-201ENST00000258781 A0A0J9YX75 114 aa20.69■□□□□ 0.9
CCM2-201ENST00000258781 KLLNB2CW77 178 aa20.69■□□□□ 0.9
CCM2-201ENST00000258781 J3KRW8 73 aa20.69■□□□□ 0.9
CCM2-201ENST00000258781 PMCHP20382 165 aa20.69■□□□□ 0.9
CCM2-201ENST00000258781 NIT1Q86X76 327 aa20.69■□□□□ 0.9
CCM2-201ENST00000258781 U3KQK5 164 aa20.69■□□□□ 0.9
CCM2-201ENST00000258781 SNAI2O43623 268 aa20.68■□□□□ 0.9
CCM2-201ENST00000258781 HSBP1O75506 76 aa20.68■□□□□ 0.9
CCM2-201ENST00000258781 RNASE4P34096 147 aaKnown RBP20.68■□□□□ 0.9
CCM2-201ENST00000258781 SSTP61278 116 aa20.68■□□□□ 0.9
CCM2-201ENST00000258781 RNASEKQ6P5S7 137 aaKnown RBP20.68■□□□□ 0.9
CCM2-201ENST00000258781 GSN-AS1Q9NRJ2 163 aa20.68■□□□□ 0.9
CCM2-201ENST00000258781 AMN1Q8IY45 258 aa20.67■□□□□ 0.9
CCM2-201ENST00000258781 CHCHD1Q96BP2 118 aaKnown RBP20.67■□□□□ 0.9
CCM2-201ENST00000258781 CSN3P07498 182 aa20.67■□□□□ 0.9
CCM2-201ENST00000258781 EBLN2Q6P2I7 272 aa20.67■□□□□ 0.9
CCM2-201ENST00000258781 URB1-AS1Q96HZ7 61 aa20.67■□□□□ 0.9
CCM2-201ENST00000258781 LEPP41159 167 aa20.66■□□□□ 0.9
CCM2-201ENST00000258781 FHL3Q13643 280 aa20.66■□□□□ 0.9
CCM2-201ENST00000258781 RAX2Q96IS3 184 aa20.66■□□□□ 0.9
CCM2-201ENST00000258781 CACNG7P62955 275 aa20.65■□□□□ 0.9
CCM2-201ENST00000258781 MSRB1Q9NZV6 116 aa20.65■□□□□ 0.9
CCM2-201ENST00000258781 IGHV4-4A0A075B6R2 117 aa20.64■□□□□ 0.9
CCM2-201ENST00000258781 CITED2Q99967 270 aaPredicted RBP20.64■□□□□ 0.9
CCM2-201ENST00000258781 NAGKQ9UJ70 344 aa20.64■□□□□ 0.9
CCM2-201ENST00000258781 TSSC4Q9Y5U2 329 aaPredicted RBP20.64■□□□□ 0.9
CCM2-201ENST00000258781 DUSP14O95147 198 aaKnown RBP20.64■□□□□ 0.89
CCM2-201ENST00000258781 MRPL51Q4U2R6 128 aaKnown RBP20.64■□□□□ 0.89
CCM2-201ENST00000258781 FOXI2Q6ZQN5 318 aa20.64■□□□□ 0.89
CCM2-201ENST00000258781 CD33P20138 364 aa20.63■□□□□ 0.89
CCM2-201ENST00000258781 ORMDL3Q8N138 153 aa20.63■□□□□ 0.89
CCM2-201ENST00000258781 FAM19A2Q8N3H0 131 aa20.63■□□□□ 0.89
CCM2-201ENST00000258781 D6R8Y8 96 aa20.62■□□□□ 0.89
CCM2-201ENST00000258781 MED14OSP0DP75 135 aa20.62■□□□□ 0.89
CCM2-201ENST00000258781 KIR3DS1Q14943 382 aa20.62■□□□□ 0.89
CCM2-201ENST00000258781 OR10AG1Q8NH19 301 aa20.62■□□□□ 0.89
CCM2-201ENST00000258781 SCGB1D1O95968 90 aa20.62■□□□□ 0.89
CCM2-201ENST00000258781 ANXA2RQ3ZCQ2 193 aa20.62■□□□□ 0.89
CCM2-201ENST00000258781 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.62■□□□□ 0.89
CCM2-201ENST00000258781 DYNLRB2Q8TF09 96 aa20.62■□□□□ 0.89
CCM2-201ENST00000258781 TENM1Q9UKZ4 2725 aa20.61■□□□□ 0.89
CCM2-201ENST00000258781 LINC00614P0C842 121 aa20.61■□□□□ 0.89
CCM2-201ENST00000258781 ASIPP42127 132 aa20.61■□□□□ 0.89
CCM2-201ENST00000258781 A0A1W2PRX2 142 aa20.6■□□□□ 0.89
CCM2-201ENST00000258781 H3BVH4 76 aa20.6■□□□□ 0.89
CCM2-201ENST00000258781 CCL24O00175 119 aa20.6■□□□□ 0.89
CCM2-201ENST00000258781 KRTAP10-3P60369 221 aa20.6■□□□□ 0.89
CCM2-201ENST00000258781 PRELID3AQ96N28 172 aa20.6■□□□□ 0.89
CCM2-201ENST00000258781 ATRQ13535 2644 aa20.6■□□□□ 0.89
CCM2-201ENST00000258781 M0R2Z0 102 aa20.6■□□□□ 0.89
CCM2-201ENST00000258781 TMEM61Q8N0U2 210 aa20.6■□□□□ 0.89
CCM2-201ENST00000258781 RNF185Q96GF1 192 aa20.6■□□□□ 0.89
CCM2-201ENST00000258781 C7orf71A4D174 169 aa20.59■□□□□ 0.89
CCM2-201ENST00000258781 WNK1Q9H4A3 2382 aa20.59■□□□□ 0.89
CCM2-201ENST00000258781 PPBPP02775 128 aa20.58■□□□□ 0.89
CCM2-201ENST00000258781 RAB4AP20338 218 aa20.58■□□□□ 0.89
CCM2-201ENST00000258781 TSPOP30536 169 aa20.58■□□□□ 0.89
CCM2-201ENST00000258781 DEFB114Q30KQ6 69 aa20.58■□□□□ 0.89
CCM2-201ENST00000258781 CKS2P33552 79 aa20.58■□□□□ 0.88
CCM2-201ENST00000258781 SPANXN1Q5VSR9 72 aa20.58■□□□□ 0.88
CCM2-201ENST00000258781 SMIM15Q7Z3B0 74 aa20.58■□□□□ 0.88
CCM2-201ENST00000258781 S100A4P26447 101 aaKnown RBP20.56■□□□□ 0.88
CCM2-201ENST00000258781 SCRT2Q9NQ03 307 aa20.56■□□□□ 0.88
CCM2-201ENST00000258781 KRTDAPP60985 99 aa20.56■□□□□ 0.88
CCM2-201ENST00000258781 SIGLEC8Q9NYZ4 499 aa20.55■□□□□ 0.88
CCM2-201ENST00000258781 LAMTOR2Q9Y2Q5 125 aa20.55■□□□□ 0.88
CCM2-201ENST00000258781 TRAV25A0A0B4J276 109 aa20.54■□□□□ 0.88
CCM2-201ENST00000258781 IGHV1-24A0A0C4DH33 117 aa20.54■□□□□ 0.88
CCM2-201ENST00000258781 CDKN1BP46527 198 aa20.54■□□□□ 0.88
CCM2-201ENST00000258781 FAM159AQ6UWV7 190 aa20.54■□□□□ 0.88
CCM2-201ENST00000258781 ADARB2-AS1A8MUL3 147 aa20.54■□□□□ 0.88
CCM2-201ENST00000258781 AMTNQ6UX39 209 aa20.54■□□□□ 0.88
CCM2-201ENST00000258781 PRSS3P2Q8NHM4 247 aa20.54■□□□□ 0.88
CCM2-201ENST00000258781 SPAG8Q99932 426 aaPredicted RBP20.54■□□□□ 0.88
CCM2-201ENST00000258781 TRAV12-3A0A0B4J271 114 aa20.53■□□□□ 0.88
CCM2-201ENST00000258781 A8MTW9 85 aa20.53■□□□□ 0.88
CCM2-201ENST00000258781 IGKV3-20P01619 116 aa20.53■□□□□ 0.88
CCM2-201ENST00000258781 DEFB131AP59861 70 aa20.53■□□□□ 0.88
CCM2-201ENST00000258781 FA2HQ7L5A8 372 aa20.53■□□□□ 0.88
CCM2-201ENST00000258781 C3orf79P0CE67 100 aa20.52■□□□□ 0.88
CCM2-201ENST00000258781 PKIAP61925 76 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms