RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CCL14Q16627 93 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 TRBV27A0A0K0K1C4 114 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 H7C2G1 150 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 TMEM256-PLSCR3K7ERE1 68 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 PLNP26678 52 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 Q1RN00 199 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 TMEM92Q6UXU6 159 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 FREM1Q5H8C1 2179 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 PIEZO1Q92508 2521 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 D6R8Y8 96 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 ZNF73O43830 326 aaPredicted RBP5.85□□□□□ -1.47
GPNMB-201ENST00000258733 ATP5EP56381 51 aaPredicted RBP5.85□□□□□ -1.47
GPNMB-201ENST00000258733 MLANAQ16655 118 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 FAM222AQ5U5X8 452 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 Q9H8V8 135 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 MUC22E2RYF6 1773 aaPredicted RBP5.84□□□□□ -1.47
GPNMB-201ENST00000258733 A0A087WVE0 104 aa5.84□□□□□ -1.47
GPNMB-201ENST00000258733 IGLV1-36A0A0B4J1U3 117 aa5.84□□□□□ -1.47
GPNMB-201ENST00000258733 A0A1B0GUT8 65 aa5.84□□□□□ -1.47
GPNMB-201ENST00000258733 CD70P32970 193 aa5.84□□□□□ -1.47
GPNMB-201ENST00000258733 RIGQ13278 110 aa5.84□□□□□ -1.47
GPNMB-201ENST00000258733 CRIP3Q6Q6R5 217 aa5.84□□□□□ -1.47
GPNMB-201ENST00000258733 IGFL3Q6UXB1 125 aa5.84□□□□□ -1.47
GPNMB-201ENST00000258733 WFDC5Q8TCV5 224 aa5.84□□□□□ -1.47
GPNMB-201ENST00000258733 IGKV1D-43A0A0B4J1Z2 117 aa5.84□□□□□ -1.48
GPNMB-201ENST00000258733 TRBV30A0A0K0K1B3 111 aa5.84□□□□□ -1.48
GPNMB-201ENST00000258733 NDUFA3O95167 84 aa5.84□□□□□ -1.48
GPNMB-201ENST00000258733 IGHV3-30P01768 117 aa5.84□□□□□ -1.48
GPNMB-201ENST00000258733 IGHV3-30-5P0DP03 117 aa5.84□□□□□ -1.48
GPNMB-201ENST00000258733 HMGA1P17096 107 aaKnown RBP5.84□□□□□ -1.48
GPNMB-201ENST00000258733 NRACQ8N912 160 aa5.84□□□□□ -1.48
GPNMB-201ENST00000258733 TIMM21Q9BVV7 248 aa5.84□□□□□ -1.48
GPNMB-201ENST00000258733 DEFB127Q9H1M4 99 aa5.84□□□□□ -1.48
GPNMB-201ENST00000258733 ARHGAP32A7KAX9 2087 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 CEP290O15078 2479 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 KNTC1P50748 2209 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 UNC13CQ8NB66 2214 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 LINC00473A8K010 186 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 C4orf51C9J302 202 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 GHRHP01286 108 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 MIR17HGQ75NE6 70 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 ORMDL3Q8N138 153 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 DSCAML1Q8TD84 2053 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 LYRM9A8MSI8 78 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 E7EUB6 86 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 NDUFS5O43920 106 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 Q6ZPA2 131 aa5.83□□□□□ -1.48
GPNMB-201ENST00000258733 C6orf106Q9H6K1 298 aaPredicted RBP5.83□□□□□ -1.48
GPNMB-201ENST00000258733 TCF20Q9UGU0 1960 aaKnown RBP5.83□□□□□ -1.48
GPNMB-201ENST00000258733 DYNAPQ8N1N2 210 aa5.82□□□□□ -1.48
GPNMB-201ENST00000258733 TMEM263Q8WUH6 116 aaKnown RBP5.82□□□□□ -1.48
GPNMB-201ENST00000258733 PSMG3-AS1Q96PY0 264 aa5.82□□□□□ -1.48
GPNMB-201ENST00000258733 ZNF71Q9NQZ8 489 aaPredicted RBP5.82□□□□□ -1.48
GPNMB-201ENST00000258733 LINC00588Q9Y4M8 146 aa5.82□□□□□ -1.48
GPNMB-201ENST00000258733 U3KQK5 164 aa5.82□□□□□ -1.48
GPNMB-201ENST00000258733 HTTP42858 3142 aa5.82□□□□□ -1.48
GPNMB-201ENST00000258733 PI4KAP42356 2102 aa5.82□□□□□ -1.48
GPNMB-201ENST00000258733 FAM229BQ4G0N7 80 aa5.82□□□□□ -1.48
GPNMB-201ENST00000258733 KMT2BQ9UMN6 2715 aaPredicted RBP5.82□□□□□ -1.48
GPNMB-201ENST00000258733 ADAMTS9Q9P2N4 1935 aa5.82□□□□□ -1.48
GPNMB-201ENST00000258733 IGKV1D-42A0A075B6H8 117 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 IBA57-AS1B1ANH7 110 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 TRIAP1O43715 76 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 EGR2P11161 476 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-201ENST00000258733 Q6JHZ5 121 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 GUSBP11Q6P575 273 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 CXCL17Q6UXB2 119 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 LINC00322Q6ZN03 302 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-201ENST00000258733 A0A0J9YY99 117 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 ARMS2P0C7Q2 107 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 KLKP1Q107X0 134 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 FAM19A3Q7Z5A8 133 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 DAND5Q8N907 189 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 VSIG2Q96IQ7 327 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 COL6A3P12111 3177 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 PCNX2A6NKB5 2137 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 SPTBN5Q9NRC6 3674 aaKnown RBP5.81□□□□□ -1.48
GPNMB-201ENST00000258733 IGKV3D-7A0A0C4DH55 119 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 A8MUN3 132 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 UBE2L6O14933 153 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 LYZL4Q96KX0 146 aa5.81□□□□□ -1.48
GPNMB-201ENST00000258733 F8WEM9 126 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 IGHV3-13P01766 116 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 Q6ZVQ6 151 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 ZGRF1Q86YA3 2104 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 OVOL2Q9BRP0 275 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 LRRK1Q38SD2 2015 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 TMEM202A6NGA9 273 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 M0R135 149 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 COX6CP09669 75 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 ZNF80P51504 273 aaPredicted RBP5.8□□□□□ -1.48
GPNMB-201ENST00000258733 ZNF134P52741 427 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 ZNF329Q86UD4 541 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 SPTSSAQ969W0 71 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 UBE2D4Q9Y2X8 147 aa5.8□□□□□ -1.48
GPNMB-201ENST00000258733 PRRC2AP48634 2157 aaKnown RBP5.79□□□□□ -1.48
GPNMB-201ENST00000258733 TRAV13-2A0A0B4J235 113 aa5.79□□□□□ -1.48
GPNMB-201ENST00000258733 TMEM223A0PJW6 202 aa5.79□□□□□ -1.48
GPNMB-201ENST00000258733 EIF4EBP3O60516 100 aaPredicted RBP5.79□□□□□ -1.48
GPNMB-201ENST00000258733 COX6B1P14854 86 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms