RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 TRAV12-2A0A075B6T6 113 aa11.63□□□□□ -0.55
UBE4B-201ENST00000253251 E7EUB6 86 aa11.63□□□□□ -0.55
UBE4B-201ENST00000253251 C1orf159Q96HA4 380 aa11.63□□□□□ -0.55
UBE4B-201ENST00000253251 CKS1BP61024 79 aa11.63□□□□□ -0.55
UBE4B-201ENST00000253251 CLPSL1A2RUU4 121 aa11.63□□□□□ -0.55
UBE4B-201ENST00000253251 HLA-DMBP28068 263 aa11.63□□□□□ -0.55
UBE4B-201ENST00000253251 MYMXA0A1B0GTQ4 84 aa11.63□□□□□ -0.55
UBE4B-201ENST00000253251 EGR2P11161 476 aaPredicted RBP11.63□□□□□ -0.55
UBE4B-201ENST00000253251 ZC2HC1BQ5TFG8 222 aa11.63□□□□□ -0.55
UBE4B-201ENST00000253251 IGKV3D-20A0A0C4DH25 116 aa11.62□□□□□ -0.55
UBE4B-201ENST00000253251 CRYGBP07316 175 aa11.62□□□□□ -0.55
UBE4B-201ENST00000253251 SLURP1P55000 103 aa11.62□□□□□ -0.55
UBE4B-201ENST00000253251 C9orf47Q6ZRZ4 202 aa11.62□□□□□ -0.55
UBE4B-201ENST00000253251 C2orf70A6NJV1 201 aa11.62□□□□□ -0.55
UBE4B-201ENST00000253251 UBE2DNLQ8IWF7 75 aa11.62□□□□□ -0.55
UBE4B-201ENST00000253251 IGF2BP2-AS1Q96M15 143 aa11.62□□□□□ -0.55
UBE4B-201ENST00000253251 NHP2Q9NX24 153 aaKnown RBP11.62□□□□□ -0.55
UBE4B-201ENST00000253251 IGHG4P01861 327 aa11.62□□□□□ -0.55
UBE4B-201ENST00000253251 IGHV4-31P0DP07 118 aa11.62□□□□□ -0.55
UBE4B-201ENST00000253251 TP53TG1Q9Y2A0 90 aa11.62□□□□□ -0.55
UBE4B-201ENST00000253251 SPCS1Q9Y6A9 102 aa11.62□□□□□ -0.55
UBE4B-201ENST00000253251 PMVKQ15126 192 aa11.62□□□□□ -0.55
UBE4B-201ENST00000253251 CHD3Q12873 2000 aaKnown RBP11.61□□□□□ -0.55
UBE4B-201ENST00000253251 IGHV4OR15-8A0A075B7B6 117 aa11.61□□□□□ -0.55
UBE4B-201ENST00000253251 A0A087WW49 117 aa11.61□□□□□ -0.55
UBE4B-201ENST00000253251 TRAV2A0A0B4J234 112 aa11.61□□□□□ -0.55
UBE4B-201ENST00000253251 TEX48A0A1B0GUV7 120 aa11.61□□□□□ -0.55
UBE4B-201ENST00000253251 KLF5Q13887 457 aaPredicted RBP11.61□□□□□ -0.55
UBE4B-201ENST00000253251 PHLDA1Q8WV24 401 aaPredicted RBP11.61□□□□□ -0.55
UBE4B-201ENST00000253251 COL4A2P08572 1712 aa11.61□□□□□ -0.55
UBE4B-201ENST00000253251 IGLC2P0DOY2 106 aa11.61□□□□□ -0.55
UBE4B-201ENST00000253251 MORN5Q5VZ52 161 aa11.61□□□□□ -0.55
UBE4B-201ENST00000253251 MED14OSP0DP75 135 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 TIMM21Q9BVV7 248 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 KMT2EQ8IZD2 1858 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 Q6YL49 198 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 NCOR2Q9Y618 2525 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 GAGE12JA6NER3 117 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 GAGE1Q13065 139 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 GAGE4Q13068 117 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 GAGE5Q13069 117 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 LGALS9BQ3B8N2 356 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 GAGE13Q4V321 117 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 LGALS9CQ6DKI2 356 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 TMEM243Q9BU79 118 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 MRPL36Q9P0J6 103 aaKnown RBP11.6□□□□□ -0.55
UBE4B-201ENST00000253251 GAGE12BA1L429 117 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 GAGE7O76087 117 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 GAGE12FP0CL80 117 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 GAGE12GP0CL81 117 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 GAGE12IP0CL82 117 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 DEFB136Q30KP8 78 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 SIGLEC8Q9NYZ4 499 aa11.6□□□□□ -0.55
UBE4B-201ENST00000253251 CD5LO43866 347 aa11.59□□□□□ -0.55
UBE4B-201ENST00000253251 RHOHQ15669 191 aa11.59□□□□□ -0.55
UBE4B-201ENST00000253251 C20orf144Q9BQM9 153 aa11.59□□□□□ -0.55
UBE4B-201ENST00000253251 DOPEY2Q9Y3R5 2298 aa11.59□□□□□ -0.55
UBE4B-201ENST00000253251 IGKV1D-37A0A075B6S9 117 aa11.59□□□□□ -0.55
UBE4B-201ENST00000253251 F5H768 121 aa11.59□□□□□ -0.55
UBE4B-201ENST00000253251 F6UB75 175 aa11.59□□□□□ -0.55
UBE4B-201ENST00000253251 LINC00158P58513 81 aa11.59□□□□□ -0.55
UBE4B-201ENST00000253251 PRR31Q5SQ13 230 aa11.59□□□□□ -0.55
UBE4B-201ENST00000253251 A0A1B0GV90 55 aa11.59□□□□□ -0.55
UBE4B-201ENST00000253251 INSL3P51460 131 aa11.59□□□□□ -0.55
UBE4B-201ENST00000253251 SLC25A20O43772 301 aa11.58□□□□□ -0.56
UBE4B-201ENST00000253251 NPYP01303 97 aa11.58□□□□□ -0.56
UBE4B-201ENST00000253251 C21orf62-AS1Q17RA5 79 aa11.58□□□□□ -0.56
UBE4B-201ENST00000253251 PCP4P48539 62 aa11.58□□□□□ -0.56
UBE4B-201ENST00000253251 hDV102S1A0JD36 115 aa11.58□□□□□ -0.56
UBE4B-201ENST00000253251 RIPPLY3P57055 190 aa11.58□□□□□ -0.56
UBE4B-201ENST00000253251 C6orf226Q5I0X4 101 aa11.58□□□□□ -0.56
UBE4B-201ENST00000253251 ZNRF2Q8NHG8 242 aa11.57□□□□□ -0.56
UBE4B-201ENST00000253251 DNAJC30Q96LL9 226 aa11.57□□□□□ -0.56
UBE4B-201ENST00000253251 H3BUT2 72 aa11.57□□□□□ -0.56
UBE4B-201ENST00000253251 COA6Q5JTJ3 125 aaKnown RBP11.57□□□□□ -0.56
UBE4B-201ENST00000253251 NEGR1Q7Z3B1 354 aa11.57□□□□□ -0.56
UBE4B-201ENST00000253251 ERG28Q9UKR5 140 aa11.57□□□□□ -0.56
UBE4B-201ENST00000253251 TRAV13-1A0A0B4J241 112 aa11.56□□□□□ -0.56
UBE4B-201ENST00000253251 DNAJC9-AS1A6NH13 148 aa11.56□□□□□ -0.56
UBE4B-201ENST00000253251 IGHV1-24A0A0C4DH33 117 aa11.56□□□□□ -0.56
UBE4B-201ENST00000253251 C16orf74Q96GX8 76 aa11.56□□□□□ -0.56
UBE4B-201ENST00000253251 CHAC1Q9BUX1 264 aa11.56□□□□□ -0.56
UBE4B-201ENST00000253251 ARHGAP21Q5T5U3 1957 aa11.56□□□□□ -0.56
UBE4B-201ENST00000253251 LGALS9O00182 355 aa11.55□□□□□ -0.56
UBE4B-201ENST00000253251 C1orf229Q6ZS94 237 aaPredicted RBP11.55□□□□□ -0.56
UBE4B-201ENST00000253251 ZNF479Q96JC4 524 aa11.55□□□□□ -0.56
UBE4B-201ENST00000253251 ZNF295-AS1Q8N0V1 137 aa11.55□□□□□ -0.56
UBE4B-201ENST00000253251 IGHV3-64A0A075B6Q5 118 aa11.55□□□□□ -0.56
UBE4B-201ENST00000253251 A0A1B0GWB2 263 aa11.55□□□□□ -0.56
UBE4B-201ENST00000253251 GNRH2O43555 120 aa11.55□□□□□ -0.56
UBE4B-201ENST00000253251 CCDC140Q96MF4 163 aa11.54□□□□□ -0.56
UBE4B-201ENST00000253251 HIVEP2P31629 2446 aa11.54□□□□□ -0.56
UBE4B-201ENST00000253251 IGF2RP11717 2491 aa11.54□□□□□ -0.56
UBE4B-201ENST00000253251 IGHV3-16A0A0C4DH30 117 aa11.54□□□□□ -0.56
UBE4B-201ENST00000253251 UTF1Q5T230 341 aa11.54□□□□□ -0.56
UBE4B-201ENST00000253251 ESDP10768 282 aa11.54□□□□□ -0.56
UBE4B-201ENST00000253251 U3KQE9 123 aa11.54□□□□□ -0.56
UBE4B-201ENST00000253251 HLA-DRB4P13762 266 aa11.54□□□□□ -0.56
UBE4B-201ENST00000253251 HLA-DRB4X5D2U9 266 aa11.54□□□□□ -0.56
UBE4B-201ENST00000253251 DSCAMO60469 2012 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms