RNA–Protein interactions for RNA: ENST00000251849.8

RAF1-201, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAF1, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-201ENST00000251849 HIGD1BQ9P298 99 aa11.27□□□□□ -0.61
RAF1-201ENST00000251849 IGKV3D-20A0A0C4DH25 116 aa11.26□□□□□ -0.61
RAF1-201ENST00000251849 ATP5LO75964 103 aa11.26□□□□□ -0.61
RAF1-201ENST00000251849 TRPT1Q86TN4 253 aaKnown RBP11.26□□□□□ -0.61
RAF1-201ENST00000251849 TRAV8-2A0A0B4J237 113 aa11.26□□□□□ -0.61
RAF1-201ENST00000251849 S100A4P26447 101 aaKnown RBP11.26□□□□□ -0.61
RAF1-201ENST00000251849 RPL11P62913 178 aaKnown RBP11.26□□□□□ -0.61
RAF1-201ENST00000251849 Q1RN00 199 aa11.26□□□□□ -0.61
RAF1-201ENST00000251849 TMEM155Q4W5P6 130 aa11.26□□□□□ -0.61
RAF1-201ENST00000251849 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
RAF1-201ENST00000251849 CARD19Q96LW7 228 aa11.25□□□□□ -0.61
RAF1-201ENST00000251849 SMAD5-AS1Q9Y6J3 95 aa11.25□□□□□ -0.61
RAF1-201ENST00000251849 SETD2Q9BYW2 2564 aaPredicted RBP11.25□□□□□ -0.61
RAF1-201ENST00000251849 TSPAN13O95857 204 aa11.25□□□□□ -0.61
RAF1-201ENST00000251849 IGHV4-39P01824 125 aa11.25□□□□□ -0.61
RAF1-201ENST00000251849 IGLC6P0CF74 106 aa11.25□□□□□ -0.61
RAF1-201ENST00000251849 A0A087WX48 190 aa11.25□□□□□ -0.61
RAF1-201ENST00000251849 NPC2P61916 151 aa11.25□□□□□ -0.61
RAF1-201ENST00000251849 TMEM170BQ5T4T1 132 aa11.25□□□□□ -0.61
RAF1-201ENST00000251849 Q8N8P6 123 aa11.25□□□□□ -0.61
RAF1-201ENST00000251849 NCOR2Q9Y618 2525 aa11.25□□□□□ -0.61
RAF1-201ENST00000251849 MRPS12O15235 138 aaKnown RBP11.24□□□□□ -0.61
RAF1-201ENST00000251849 TCL1BO95988 128 aa11.24□□□□□ -0.61
RAF1-201ENST00000251849 CRIP2P52943 208 aaPredicted RBP11.24□□□□□ -0.61
RAF1-201ENST00000251849 MFAP4P55083 255 aa11.24□□□□□ -0.61
RAF1-201ENST00000251849 LINC00574Q9H8X3 128 aa11.24□□□□□ -0.61
RAF1-201ENST00000251849 C9JAW5 83 aa11.24□□□□□ -0.61
RAF1-201ENST00000251849 INS-IGF2F8WCM5 200 aa11.24□□□□□ -0.61
RAF1-201ENST00000251849 Q6ZS46 218 aa11.24□□□□□ -0.61
RAF1-201ENST00000251849 ZNF575Q86XF7 245 aa11.24□□□□□ -0.61
RAF1-201ENST00000251849 TRBV7-3A0A075B6L6 115 aa11.24□□□□□ -0.61
RAF1-201ENST00000251849 CDX4O14627 284 aaPredicted RBP11.23□□□□□ -0.61
RAF1-201ENST00000251849 ANKRD29Q8N6D5 301 aa11.23□□□□□ -0.61
RAF1-201ENST00000251849 CHD8Q9HCK8 2581 aa11.23□□□□□ -0.61
RAF1-201ENST00000251849 ADARB2-AS1A8MUL3 147 aa11.23□□□□□ -0.61
RAF1-201ENST00000251849 IGHG4P01861 327 aa11.23□□□□□ -0.61
RAF1-201ENST00000251849 AGPAT4-IT1Q9H0P7 198 aa11.23□□□□□ -0.61
RAF1-201ENST00000251849 ZMAT4Q9H898 229 aa11.23□□□□□ -0.61
RAF1-201ENST00000251849 TCTEX1D4Q5JR98 221 aa11.22□□□□□ -0.61
RAF1-201ENST00000251849 CFAP126Q5VTH2 177 aa11.22□□□□□ -0.61
RAF1-201ENST00000251849 PVRIGQ6DKI7 326 aa11.22□□□□□ -0.61
RAF1-201ENST00000251849 CRYBG3Q68DQ2 2970 aa11.22□□□□□ -0.61
RAF1-201ENST00000251849 CCDC179H3BU77 68 aa11.22□□□□□ -0.61
RAF1-201ENST00000251849 CLEC3BP05452 202 aa11.22□□□□□ -0.61
RAF1-201ENST00000251849 DLX6P56179 175 aa11.22□□□□□ -0.61
RAF1-201ENST00000251849 SPTBN4Q9H254 2564 aa11.22□□□□□ -0.61
RAF1-201ENST00000251849 F8VRH5 84 aa11.21□□□□□ -0.61
RAF1-201ENST00000251849 H7C1H1 209 aa11.21□□□□□ -0.61
RAF1-201ENST00000251849 RPL39P62891 51 aaKnown RBP11.21□□□□□ -0.61
RAF1-201ENST00000251849 SRSF1Q07955 248 aaKnown RBP eCLIP11.21□□□□□ -0.61
RAF1-201ENST00000251849 CLEC19AQ6UXS0 136 aa11.21□□□□□ -0.61
RAF1-201ENST00000251849 TEX29Q8N6K0 151 aa11.21□□□□□ -0.61
RAF1-201ENST00000251849 RNASE6Q93091 150 aaKnown RBP11.21□□□□□ -0.61
RAF1-201ENST00000251849 FANCD2OSQ96PS1 177 aa11.21□□□□□ -0.61
RAF1-201ENST00000251849 CSMD2Q7Z408 3487 aa11.21□□□□□ -0.61
RAF1-201ENST00000251849 F5H697 171 aa11.21□□□□□ -0.62
RAF1-201ENST00000251849 DUSP14O95147 198 aaKnown RBP11.21□□□□□ -0.62
RAF1-201ENST00000251849 CRYGBP07316 175 aa11.21□□□□□ -0.62
RAF1-201ENST00000251849 SRD5A1P18405 259 aa11.21□□□□□ -0.62
RAF1-201ENST00000251849 NBR2O15453 112 aa11.2□□□□□ -0.62
RAF1-201ENST00000251849 AJUBAQ96IF1 538 aa11.2□□□□□ -0.62
RAF1-201ENST00000251849 OPRPNQ99935 248 aaPredicted RBP11.2□□□□□ -0.62
RAF1-201ENST00000251849 CRLF1O75462 422 aa11.2□□□□□ -0.62
RAF1-201ENST00000251849 C2orf66Q6UXQ4 117 aa11.2□□□□□ -0.62
RAF1-201ENST00000251849 F6UB75 175 aa11.2□□□□□ -0.62
RAF1-201ENST00000251849 TRAV2A0A0B4J234 112 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 FAM74A4Q5TZK3 123 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 ZFAND6Q6FIF0 208 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 LYPD1Q8N2G4 141 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 JPT2Q9H910 190 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 MBD3L4A6NDZ8 208 aaPredicted RBP11.19□□□□□ -0.62
RAF1-201ENST00000251849 MBD3L3A6NE82 208 aaPredicted RBP11.19□□□□□ -0.62
RAF1-201ENST00000251849 MBD3L5A6NJ08 208 aaPredicted RBP11.19□□□□□ -0.62
RAF1-201ENST00000251849 A8MWV9 139 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 IGLV1-47P01700 117 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 NRACQ8N912 160 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 GATD1Q8NB37 220 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 MBD3L2Q8NHZ7 208 aaPredicted RBP11.19□□□□□ -0.62
RAF1-201ENST00000251849 TRAV4A0A0B4J268 109 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 TRBV7-9A0A0J9YWB2 115 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 CEACAM4O75871 244 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 PLNP26678 52 aa11.19□□□□□ -0.62
RAF1-201ENST00000251849 G3V318 75 aa11.18□□□□□ -0.62
RAF1-201ENST00000251849 C15orf32Q32M92 178 aa11.18□□□□□ -0.62
RAF1-201ENST00000251849 PRR9Q5T870 116 aa11.18□□□□□ -0.62
RAF1-201ENST00000251849 LINC01560Q8TB33 94 aa11.18□□□□□ -0.62
RAF1-201ENST00000251849 A0A087WWL8 130 aa11.18□□□□□ -0.62
RAF1-201ENST00000251849 CTSGP08311 255 aa11.18□□□□□ -0.62
RAF1-201ENST00000251849 RASL10AQ92737 203 aa11.18□□□□□ -0.62
RAF1-201ENST00000251849 CENPEQ02224 2701 aa11.18□□□□□ -0.62
RAF1-201ENST00000251849 IGLV2-18A0A075B6J9 118 aa11.17□□□□□ -0.62
RAF1-201ENST00000251849 F8W735 103 aaPredicted RBP11.17□□□□□ -0.62
RAF1-201ENST00000251849 GAGE5Q13069 117 aa11.17□□□□□ -0.62
RAF1-201ENST00000251849 GAGE6Q13070 117 aa11.17□□□□□ -0.62
RAF1-201ENST00000251849 ERG28Q9UKR5 140 aa11.17□□□□□ -0.62
RAF1-201ENST00000251849 ZNF256Q9Y2P7 627 aaPredicted RBP11.17□□□□□ -0.62
RAF1-201ENST00000251849 HRNRQ86YZ3 2850 aaPredicted RBP11.17□□□□□ -0.62
RAF1-201ENST00000251849 LINC00311Q8N616 119 aa11.17□□□□□ -0.62
RAF1-201ENST00000251849 NTN5Q8WTR8 489 aaPredicted RBP11.17□□□□□ -0.62
RAF1-201ENST00000251849 PPDPFLQ8WWR9 84 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms