RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 HHLA3Q9XRX5 114 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 TNFRSF18Q9Y5U5 241 aa6.99□□□□□ -1.29
VPS50-201ENST00000251739 A0A087WTM6 91 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 K7EP13 123 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 PRAF2O60831 178 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 OR10J4P0C629 311 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 DNAH10OSP0CZ25 163 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 FUSP35637 526 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS50-201ENST00000251739 ASAH1Q13510 395 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 NEGR1Q7Z3B1 354 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 NFE4Q86UQ8 179 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 LYPD1Q8N2G4 141 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 OR10G4Q8NGN3 311 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 RASL10AQ92737 203 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 PAXXQ9BUH6 204 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 WDR61Q9GZS3 305 aaKnown RBP6.98□□□□□ -1.29
VPS50-201ENST00000251739 KCNIP2Q9NS61 270 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 OR5AC2Q9NZP5 309 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 MDFICQ9P1T7 246 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 LENEPQ9Y5L5 61 aa6.98□□□□□ -1.29
VPS50-201ENST00000251739 FAM240BA0A1B0GVZ2 78 aa6.97□□□□□ -1.29
VPS50-201ENST00000251739 EPM2AB3EWF7 344 aa6.97□□□□□ -1.29
VPS50-201ENST00000251739 E5RGE8 158 aa6.97□□□□□ -1.29
VPS50-201ENST00000251739 K7EQD1 137 aa6.97□□□□□ -1.29
VPS50-201ENST00000251739 DEFA1P59665 94 aa6.97□□□□□ -1.29
VPS50-201ENST00000251739 DEFA3P59666 94 aa6.97□□□□□ -1.29
VPS50-201ENST00000251739 KRTAP10-1P60331 282 aa6.97□□□□□ -1.29
VPS50-201ENST00000251739 TDRG1Q3Y452 100 aa6.97□□□□□ -1.29
VPS50-201ENST00000251739 WFDC10BQ8IUB3 73 aa6.97□□□□□ -1.29
VPS50-201ENST00000251739 LINC00518Q8N0U6 118 aa6.97□□□□□ -1.29
VPS50-201ENST00000251739 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.97□□□□□ -1.29
VPS50-201ENST00000251739 ZNF479Q96JC4 524 aa6.97□□□□□ -1.29
VPS50-201ENST00000251739 NMES1Q9C002 83 aa6.97□□□□□ -1.29
VPS50-201ENST00000251739 SIX6O95475 246 aa6.96□□□□□ -1.3
VPS50-201ENST00000251739 PTTG1O95997 202 aa6.96□□□□□ -1.3
VPS50-201ENST00000251739 SFTA3P0C7M3 94 aa6.96□□□□□ -1.3
VPS50-201ENST00000251739 MUC21Q5SSG8 566 aa6.96□□□□□ -1.3
VPS50-201ENST00000251739 TMED6Q8WW62 240 aa6.96□□□□□ -1.3
VPS50-201ENST00000251739 SPXQ9BT56 116 aa6.96□□□□□ -1.3
VPS50-201ENST00000251739 SLC25A31Q9H0C2 315 aa6.96□□□□□ -1.3
VPS50-201ENST00000251739 MSRB1Q9NZV6 116 aa6.96□□□□□ -1.3
VPS50-201ENST00000251739 LY96Q9Y6Y9 160 aa6.96□□□□□ -1.3
VPS50-201ENST00000251739 DIRC3C9JPN6 131 aa6.95□□□□□ -1.3
VPS50-201ENST00000251739 OR7C2O60412 319 aa6.95□□□□□ -1.3
VPS50-201ENST00000251739 ORM1P02763 201 aa6.95□□□□□ -1.3
VPS50-201ENST00000251739 SRIP30626 198 aa6.95□□□□□ -1.3
VPS50-201ENST00000251739 TIRAPP58753 221 aa6.95□□□□□ -1.3
VPS50-201ENST00000251739 RAB4BP61018 213 aa6.95□□□□□ -1.3
VPS50-201ENST00000251739 RANP62826 216 aaKnown RBP6.95□□□□□ -1.3
VPS50-201ENST00000251739 UBE2L3P68036 154 aaKnown RBP6.95□□□□□ -1.3
VPS50-201ENST00000251739 TMEM183BQ1AE95 376 aa6.95□□□□□ -1.3
VPS50-201ENST00000251739 TMEM183AQ8IXX5 376 aa6.95□□□□□ -1.3
VPS50-201ENST00000251739 TRGV11A0A075B6L2 103 aa6.94□□□□□ -1.3
VPS50-201ENST00000251739 TRAV4A0A0B4J268 109 aa6.94□□□□□ -1.3
VPS50-201ENST00000251739 TRGV4A0A0C4DH28 118 aa6.94□□□□□ -1.3
VPS50-201ENST00000251739 GYPEP15421 78 aa6.94□□□□□ -1.3
VPS50-201ENST00000251739 CSN1S1P47710 185 aa6.94□□□□□ -1.3
VPS50-201ENST00000251739 H2BFSP57053 126 aa6.94□□□□□ -1.3
VPS50-201ENST00000251739 FLI1Q01543 452 aaPredicted RBP6.94□□□□□ -1.3
VPS50-201ENST00000251739 ZFP69Q49AA0 526 aa6.94□□□□□ -1.3
VPS50-201ENST00000251739 Q5VSD8 79 aa6.94□□□□□ -1.3
VPS50-201ENST00000251739 MZT2BQ6NZ67 158 aa6.94□□□□□ -1.3
VPS50-201ENST00000251739 ATP5SQ99766 215 aa6.94□□□□□ -1.3
VPS50-201ENST00000251739 TRAV9-2A0A087WT02 112 aa6.93□□□□□ -1.3
VPS50-201ENST00000251739 IGHV3-16A0A0C4DH30 117 aa6.93□□□□□ -1.3
VPS50-201ENST00000251739 C17orf112F2Z3M2 114 aa6.93□□□□□ -1.3
VPS50-201ENST00000251739 GATA1P15976 413 aaPredicted RBP6.93□□□□□ -1.3
VPS50-201ENST00000251739 CYCSP99999 105 aaKnown RBP6.93□□□□□ -1.3
VPS50-201ENST00000251739 LRRC37A5PQ49AS3 106 aa6.93□□□□□ -1.3
VPS50-201ENST00000251739 KHDC3LQ587J8 217 aa6.93□□□□□ -1.3
VPS50-201ENST00000251739 FAM159AQ6UWV7 190 aa6.93□□□□□ -1.3
VPS50-201ENST00000251739 PPP1R1CQ8WVI7 109 aa6.93□□□□□ -1.3
VPS50-201ENST00000251739 TVP23CQ96ET8 276 aa6.93□□□□□ -1.3
VPS50-201ENST00000251739 TXNDC17Q9BRA2 123 aa6.93□□□□□ -1.3
VPS50-201ENST00000251739 HSPB11Q9Y547 144 aa6.93□□□□□ -1.3
VPS50-201ENST00000251739 LOC100131303A0A0U1RQF7 123 aa6.92□□□□□ -1.3
VPS50-201ENST00000251739 LRCOL1A6NCL2 159 aa6.92□□□□□ -1.3
VPS50-201ENST00000251739 C9JCJ5 164 aa6.92□□□□□ -1.3
VPS50-201ENST00000251739 M0R2P5 195 aa6.92□□□□□ -1.3
VPS50-201ENST00000251739 INAFM2P0DMQ5 153 aa6.92□□□□□ -1.3
VPS50-201ENST00000251739 EVI2AP22794 236 aa6.92□□□□□ -1.3
VPS50-201ENST00000251739 IFITM3Q01628 133 aa6.92□□□□□ -1.3
VPS50-201ENST00000251739 IFITM2Q01629 132 aa6.92□□□□□ -1.3
VPS50-201ENST00000251739 FFAR4Q5NUL3 377 aa6.92□□□□□ -1.3
VPS50-201ENST00000251739 C10orf126Q8N4M7 172 aa6.92□□□□□ -1.3
VPS50-201ENST00000251739 PCNPQ8WW12 178 aaKnown RBP6.92□□□□□ -1.3
VPS50-201ENST00000251739 OTORQ9NRC9 128 aa6.92□□□□□ -1.3
VPS50-201ENST00000251739 GNRH2O43555 120 aa6.91□□□□□ -1.3
VPS50-201ENST00000251739 EIF3GO75821 320 aaKnown RBP eCLIP6.91□□□□□ -1.3
VPS50-201ENST00000251739 MPC2O95563 127 aa6.91□□□□□ -1.3
VPS50-201ENST00000251739 TYMSP04818 313 aa6.91□□□□□ -1.3
VPS50-201ENST00000251739 CRYGDP07320 174 aa6.91□□□□□ -1.3
VPS50-201ENST00000251739 TAS2R45P59539 299 aa6.91□□□□□ -1.3
VPS50-201ENST00000251739 LINC01556Q5JQF7 62 aa6.91□□□□□ -1.3
VPS50-201ENST00000251739 SH2D6Q7Z4S9 175 aa6.91□□□□□ -1.3
VPS50-201ENST00000251739 TRAV8-1A0A0A6YYK1 113 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 TRAV21A0A0B4J279 112 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 IGHV3-38A0A0C4DH36 116 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 INMT-MINDY4F8WBC2 141 aa6.9□□□□□ -1.3
VPS50-201ENST00000251739 UPK1BO75841 260 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms