RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 TMEM8BA6NDV4 472 aa14.78□□□□□ -0.04
CDC42EP1-201ENST00000249014 TCTAP57738 103 aa14.78□□□□□ -0.04
CDC42EP1-201ENST00000249014 DKK2Q9UBU2 259 aa14.78□□□□□ -0.04
CDC42EP1-201ENST00000249014 SPRY2O43597 315 aa14.77□□□□□ -0.04
CDC42EP1-201ENST00000249014 SMIM15Q7Z3B0 74 aa14.77□□□□□ -0.04
CDC42EP1-201ENST00000249014 Q8N8P6 123 aa14.77□□□□□ -0.04
CDC42EP1-201ENST00000249014 KIR3DS1Q14943 382 aa14.77□□□□□ -0.05
CDC42EP1-201ENST00000249014 FAM19A4Q96LR4 140 aa14.77□□□□□ -0.05
CDC42EP1-201ENST00000249014 DAZ1Q9NQZ3 744 aaKnown RBP14.77□□□□□ -0.05
CDC42EP1-201ENST00000249014 MYO18BQ8IUG5 2567 aa14.77□□□□□ -0.05
CDC42EP1-201ENST00000249014 ACACBO00763 2458 aa14.76□□□□□ -0.05
CDC42EP1-201ENST00000249014 IGHV4-59P01825 116 aa14.76□□□□□ -0.05
CDC42EP1-201ENST00000249014 C12orf54Q6X4T0 127 aa14.76□□□□□ -0.05
CDC42EP1-201ENST00000249014 TRAV21A0A0B4J279 112 aa14.75□□□□□ -0.05
CDC42EP1-201ENST00000249014 SRD5A1P18405 259 aa14.75□□□□□ -0.05
CDC42EP1-201ENST00000249014 DEFB112Q30KQ8 113 aa14.75□□□□□ -0.05
CDC42EP1-201ENST00000249014 OR1N2Q8NGR9 330 aa14.75□□□□□ -0.05
CDC42EP1-201ENST00000249014 TMEM158Q8WZ71 300 aa14.75□□□□□ -0.05
CDC42EP1-201ENST00000249014 GATA3P23771 443 aa14.75□□□□□ -0.05
CDC42EP1-201ENST00000249014 FBN2P35556 2912 aa14.75□□□□□ -0.05
CDC42EP1-201ENST00000249014 PRSS47A8MTI9 375 aa14.74□□□□□ -0.05
CDC42EP1-201ENST00000249014 DSCR9P59020 149 aa14.74□□□□□ -0.05
CDC42EP1-201ENST00000249014 C10orf99Q6UWK7 81 aa14.74□□□□□ -0.05
CDC42EP1-201ENST00000249014 PEF1Q9UBV8 284 aaKnown RBP14.74□□□□□ -0.05
CDC42EP1-201ENST00000249014 SMPXQ9UHP9 88 aa14.74□□□□□ -0.05
CDC42EP1-201ENST00000249014 CCL25O15444 150 aa14.74□□□□□ -0.05
CDC42EP1-201ENST00000249014 ANXA2RQ3ZCQ2 193 aa14.74□□□□□ -0.05
CDC42EP1-201ENST00000249014 A0A096LNT2 108 aa14.73□□□□□ -0.05
CDC42EP1-201ENST00000249014 TAX1BP3O14907 124 aa14.73□□□□□ -0.05
CDC42EP1-201ENST00000249014 PSMB8P28062 276 aa14.73□□□□□ -0.05
CDC42EP1-201ENST00000249014 RNASE4P34096 147 aaKnown RBP14.73□□□□□ -0.05
CDC42EP1-201ENST00000249014 DEFB125Q8N687 156 aa14.73□□□□□ -0.05
CDC42EP1-201ENST00000249014 MAPK1IP1LQ8NDC0 245 aa14.73□□□□□ -0.05
CDC42EP1-201ENST00000249014 M0R381 172 aa14.73□□□□□ -0.05
CDC42EP1-201ENST00000249014 CD5LO43866 347 aa14.73□□□□□ -0.05
CDC42EP1-201ENST00000249014 PRB1P04280 392 aa14.73□□□□□ -0.05
CDC42EP1-201ENST00000249014 ODF1Q14990 250 aa14.73□□□□□ -0.05
CDC42EP1-201ENST00000249014 APRG1Q8IVJ8 170 aa14.73□□□□□ -0.05
CDC42EP1-201ENST00000249014 BOD1L2Q8IYS8 172 aa14.73□□□□□ -0.05
CDC42EP1-201ENST00000249014 SLC25A16P16260 332 aa14.72□□□□□ -0.05
CDC42EP1-201ENST00000249014 LINC01356Q8N9X3 169 aa14.72□□□□□ -0.05
CDC42EP1-201ENST00000249014 ZANQ9Y493 2812 aa14.72□□□□□ -0.05
CDC42EP1-201ENST00000249014 ANKRD17O75179 2603 aaKnown RBP14.72□□□□□ -0.05
CDC42EP1-201ENST00000249014 ERASQ7Z444 233 aa14.71□□□□□ -0.05
CDC42EP1-201ENST00000249014 ZNF580Q9UK33 172 aa14.71□□□□□ -0.05
CDC42EP1-201ENST00000249014 S100A4P26447 101 aaKnown RBP14.71□□□□□ -0.05
CDC42EP1-201ENST00000249014 ZMAT4Q9H898 229 aa14.71□□□□□ -0.05
CDC42EP1-201ENST00000249014 K7EMT4 169 aa14.7□□□□□ -0.06
CDC42EP1-201ENST00000249014 GNRH2O43555 120 aa14.7□□□□□ -0.06
CDC42EP1-201ENST00000249014 PRSS1P07477 247 aa14.7□□□□□ -0.06
CDC42EP1-201ENST00000249014 SMIM17P0DL12 118 aa14.7□□□□□ -0.06
CDC42EP1-201ENST00000249014 ASIPP42127 132 aa14.7□□□□□ -0.06
CDC42EP1-201ENST00000249014 PTTG1IPP53801 180 aa14.7□□□□□ -0.06
CDC42EP1-201ENST00000249014 UBE2V1Q13404 147 aa14.7□□□□□ -0.06
CDC42EP1-201ENST00000249014 LAGE3Q14657 143 aa14.7□□□□□ -0.06
CDC42EP1-201ENST00000249014 PCP2Q8IVA1 136 aa14.7□□□□□ -0.06
CDC42EP1-201ENST00000249014 DCANP1Q8TF63 244 aa14.7□□□□□ -0.06
CDC42EP1-201ENST00000249014 MRAP2Q96G30 205 aa14.7□□□□□ -0.06
CDC42EP1-201ENST00000249014 HHLA3Q9XRX5 114 aa14.69□□□□□ -0.06
CDC42EP1-201ENST00000249014 PHLDA3Q9Y5J5 127 aa14.69□□□□□ -0.06
CDC42EP1-201ENST00000249014 RNASE3P12724 160 aaKnown RBP14.68□□□□□ -0.06
CDC42EP1-201ENST00000249014 NMUP48645 174 aa14.68□□□□□ -0.06
CDC42EP1-201ENST00000249014 FOXC2Q99958 501 aa14.68□□□□□ -0.06
CDC42EP1-201ENST00000249014 USP9YO00507 2555 aaPredicted RBP14.68□□□□□ -0.06
CDC42EP1-201ENST00000249014 TRBV7-9A0A0J9YWB2 115 aa14.68□□□□□ -0.06
CDC42EP1-201ENST00000249014 TGFAP01135 160 aa14.68□□□□□ -0.06
CDC42EP1-201ENST00000249014 TMEM97Q5BJF2 176 aa14.68□□□□□ -0.06
CDC42EP1-201ENST00000249014 C14orf178Q8N769 122 aaPredicted RBP14.68□□□□□ -0.06
CDC42EP1-201ENST00000249014 POLQO75417 2590 aa14.68□□□□□ -0.06
CDC42EP1-201ENST00000249014 MUC4Q99102 2169 aa14.68□□□□□ -0.06
CDC42EP1-201ENST00000249014 USP24Q9UPU5 2620 aa14.67□□□□□ -0.06
CDC42EP1-201ENST00000249014 RASL10AQ92737 203 aa14.67□□□□□ -0.06
CDC42EP1-201ENST00000249014 SMIM2Q9BVW6 85 aa14.67□□□□□ -0.06
CDC42EP1-201ENST00000249014 DPH3P1Q9H4G8 78 aa14.67□□□□□ -0.06
CDC42EP1-201ENST00000249014 ZFYVE26Q68DK2 2539 aa14.66□□□□□ -0.06
CDC42EP1-201ENST00000249014 SRSF1Q07955 248 aaKnown RBP eCLIP14.66□□□□□ -0.06
CDC42EP1-201ENST00000249014 WFDC12Q8WWY7 111 aa14.66□□□□□ -0.06
CDC42EP1-201ENST00000249014 IGKV2D-26A0A0A0MRZ7 120 aa14.66□□□□□ -0.06
CDC42EP1-201ENST00000249014 CBY3A6NI87 242 aa14.66□□□□□ -0.06
CDC42EP1-201ENST00000249014 KLLNB2CW77 178 aa14.66□□□□□ -0.06
CDC42EP1-201ENST00000249014 MED14OSP0DP75 135 aa14.66□□□□□ -0.06
CDC42EP1-201ENST00000249014 RPL39LQ96EH5 51 aaKnown RBP14.66□□□□□ -0.06
CDC42EP1-201ENST00000249014 ATP5LO75964 103 aa14.65□□□□□ -0.06
CDC42EP1-201ENST00000249014 IGKCP01834 107 aa14.65□□□□□ -0.06
CDC42EP1-201ENST00000249014 BBC3Q96PG8 261 aaPredicted RBP14.65□□□□□ -0.06
CDC42EP1-201ENST00000249014 CENPEQ02224 2701 aa14.64□□□□□ -0.07
CDC42EP1-201ENST00000249014 A1L4Q6 167 aa14.64□□□□□ -0.07
CDC42EP1-201ENST00000249014 C7orf71A4D174 169 aa14.64□□□□□ -0.07
CDC42EP1-201ENST00000249014 VAMP3Q15836 100 aa14.64□□□□□ -0.07
CDC42EP1-201ENST00000249014 OR9G4Q8NGQ1 327 aa14.64□□□□□ -0.07
CDC42EP1-201ENST00000249014 ZNF462Q96JM2 2506 aa14.64□□□□□ -0.07
CDC42EP1-201ENST00000249014 J3QLI3 93 aa14.64□□□□□ -0.07
CDC42EP1-201ENST00000249014 ID1P41134 155 aa14.64□□□□□ -0.07
CDC42EP1-201ENST00000249014 SUMO2P61956 95 aaKnown RBP14.64□□□□□ -0.07
CDC42EP1-201ENST00000249014 ADAMTSL5Q6ZMM2 481 aa14.64□□□□□ -0.07
CDC42EP1-201ENST00000249014 MYOZ3Q8TDC0 251 aa14.64□□□□□ -0.07
CDC42EP1-201ENST00000249014 FAM208BQ5VWN6 2430 aa14.64□□□□□ -0.07
CDC42EP1-201ENST00000249014 RNF223E7ERA6 249 aa14.63□□□□□ -0.07
CDC42EP1-201ENST00000249014 SIVA1O15304 175 aa14.63□□□□□ -0.07
CDC42EP1-201ENST00000249014 DOPEY2Q9Y3R5 2298 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms