RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 C8orf49Q96NF6 230 aa17.1■□□□□ 0.33
SDF2L1-201ENST00000248958 SDF2L1Q9HCN8 221 aa17.1■□□□□ 0.33
SDF2L1-201ENST00000248958 HYDINQ4G0P3 5121 aa17.1■□□□□ 0.33
SDF2L1-201ENST00000248958 GCGP01275 180 aa17.09■□□□□ 0.33
SDF2L1-201ENST00000248958 PFN1P07737 140 aaKnown RBP17.09■□□□□ 0.33
SDF2L1-201ENST00000248958 OR5I1Q13606 314 aa17.09■□□□□ 0.33
SDF2L1-201ENST00000248958 RNF212Q495C1 297 aa17.09■□□□□ 0.33
SDF2L1-201ENST00000248958 SLC51BQ86UW2 128 aa17.09■□□□□ 0.33
SDF2L1-201ENST00000248958 UBE2DNLQ8IWF7 75 aa17.08■□□□□ 0.32
SDF2L1-201ENST00000248958 MDFICQ9P1T7 246 aa17.08■□□□□ 0.32
SDF2L1-201ENST00000248958 TRAV34A0A0B4J273 112 aa17.07■□□□□ 0.32
SDF2L1-201ENST00000248958 H3BNG1 76 aa17.07■□□□□ 0.32
SDF2L1-201ENST00000248958 FMC1Q96HJ9 113 aa17.07■□□□□ 0.32
SDF2L1-201ENST00000248958 LINC00479Q96M42 142 aa17.07■□□□□ 0.32
SDF2L1-201ENST00000248958 TEX46H3BTG2 121 aa17.06■□□□□ 0.32
SDF2L1-201ENST00000248958 PAGE4O60829 102 aa17.06■□□□□ 0.32
SDF2L1-201ENST00000248958 ZNF80P51504 273 aaPredicted RBP17.06■□□□□ 0.32
SDF2L1-201ENST00000248958 UBE2G1P62253 170 aa17.06■□□□□ 0.32
SDF2L1-201ENST00000248958 MRPL16Q9NX20 251 aaKnown RBP17.06■□□□□ 0.32
SDF2L1-201ENST00000248958 ZFP30Q9Y2G7 519 aa17.06■□□□□ 0.32
SDF2L1-201ENST00000248958 GNRH2O43555 120 aa17.05■□□□□ 0.32
SDF2L1-201ENST00000248958 NUDT3O95989 172 aa17.05■□□□□ 0.32
SDF2L1-201ENST00000248958 TYMSP04818 313 aa17.05■□□□□ 0.32
SDF2L1-201ENST00000248958 HOXA5P20719 270 aa17.05■□□□□ 0.32
SDF2L1-201ENST00000248958 SULT1A2P50226 295 aa17.05■□□□□ 0.32
SDF2L1-201ENST00000248958 Q86TA4 180 aa17.05■□□□□ 0.32
SDF2L1-201ENST00000248958 TRAV26-1A0A087WT03 109 aa17.04■□□□□ 0.32
SDF2L1-201ENST00000248958 IGHV3-16A0A0C4DH30 117 aa17.04■□□□□ 0.32
SDF2L1-201ENST00000248958 TRBV6-1A0A0K0K1D8 114 aa17.04■□□□□ 0.32
SDF2L1-201ENST00000248958 FAM3BP58499 235 aaPredicted RBP17.04■□□□□ 0.32
SDF2L1-201ENST00000248958 RASL10AQ92737 203 aa17.04■□□□□ 0.32
SDF2L1-201ENST00000248958 TRAV1-1A0A0B4J248 108 aa17.03■□□□□ 0.32
SDF2L1-201ENST00000248958 A0A1B0GV50 99 aa17.03■□□□□ 0.32
SDF2L1-201ENST00000248958 AKR1C3P42330 323 aa17.03■□□□□ 0.32
SDF2L1-201ENST00000248958 SLAQ13239 276 aa17.03■□□□□ 0.32
SDF2L1-201ENST00000248958 FABP5P3A8MUU1 101 aa17.02■□□□□ 0.32
SDF2L1-201ENST00000248958 M0R2P5 195 aa17.02■□□□□ 0.32
SDF2L1-201ENST00000248958 S100A9P06702 114 aaKnown RBP17.02■□□□□ 0.32
SDF2L1-201ENST00000248958 COX8CQ7Z4L0 72 aa17.02■□□□□ 0.32
SDF2L1-201ENST00000248958 C9orf62Q8N4C0 152 aa17.02■□□□□ 0.32
SDF2L1-201ENST00000248958 MANBALQ9NQG1 85 aa17.02■□□□□ 0.32
SDF2L1-201ENST00000248958 CCL18P55774 89 aa17■□□□□ 0.31
SDF2L1-201ENST00000248958 MUC4Q99102 2169 aa17■□□□□ 0.31
SDF2L1-201ENST00000248958 A0A0J9YY99 117 aa16.99■□□□□ 0.31
SDF2L1-201ENST00000248958 TXNDC17Q9BRA2 123 aa16.99■□□□□ 0.31
SDF2L1-201ENST00000248958 C11orf21Q9P2W6 132 aa16.99■□□□□ 0.31
SDF2L1-201ENST00000248958 LTAP01374 205 aa16.98■□□□□ 0.31
SDF2L1-201ENST00000248958 PRO0255Q9UI72 69 aa16.98■□□□□ 0.31
SDF2L1-201ENST00000248958 IGHV3-53P01767 116 aa16.97■□□□□ 0.31
SDF2L1-201ENST00000248958 KMT2AQ03164 3969 aa16.96■□□□□ 0.31
SDF2L1-201ENST00000248958 VPS13DQ5THJ4 4388 aa16.96■□□□□ 0.31
SDF2L1-201ENST00000248958 TRAV4A0A0B4J268 109 aa16.96■□□□□ 0.31
SDF2L1-201ENST00000248958 PTH2Q96A98 100 aa16.96■□□□□ 0.31
SDF2L1-201ENST00000248958 ZC2HC1AQ96GY0 325 aa16.96■□□□□ 0.31
SDF2L1-201ENST00000248958 VSIG2Q96IQ7 327 aa16.96■□□□□ 0.31
SDF2L1-201ENST00000248958 GNG13Q9P2W3 67 aa16.96■□□□□ 0.31
SDF2L1-201ENST00000248958 NACAE9PAV3 2078 aa16.95■□□□□ 0.3
SDF2L1-201ENST00000248958 TRGV4A0A0C4DH28 118 aa16.95■□□□□ 0.3
SDF2L1-201ENST00000248958 SCO2A0A1W2PP80 73 aa16.95■□□□□ 0.3
SDF2L1-201ENST00000248958 PAX4O43316 350 aa16.95■□□□□ 0.3
SDF2L1-201ENST00000248958 FHL2Q14192 279 aa16.95■□□□□ 0.3
SDF2L1-201ENST00000248958 FAM162BQ5T6X4 162 aa16.95■□□□□ 0.3
SDF2L1-201ENST00000248958 C9orf85Q96MD7 179 aa16.95■□□□□ 0.3
SDF2L1-201ENST00000248958 HHLA3Q9XRX5 114 aa16.95■□□□□ 0.3
SDF2L1-201ENST00000248958 IGKV3D-20A0A0C4DH25 116 aa16.94■□□□□ 0.3
SDF2L1-201ENST00000248958 A0A1B0GVG6 124 aa16.94■□□□□ 0.3
SDF2L1-201ENST00000248958 CCL20P78556 96 aa16.94■□□□□ 0.3
SDF2L1-201ENST00000248958 OR4C5Q8NGB2 326 aa16.94■□□□□ 0.3
SDF2L1-201ENST00000248958 CIDEAO60543 219 aa16.93■□□□□ 0.3
SDF2L1-201ENST00000248958 IFNA1P01562 189 aa16.93■□□□□ 0.3
SDF2L1-201ENST00000248958 ORM1P02763 201 aa16.93■□□□□ 0.3
SDF2L1-201ENST00000248958 S100A4P26447 101 aaKnown RBP16.93■□□□□ 0.3
SDF2L1-201ENST00000248958 CRYBA4P53673 196 aa16.93■□□□□ 0.3
SDF2L1-201ENST00000248958 ZNF674Q2M3X9 581 aa16.93■□□□□ 0.3
SDF2L1-201ENST00000248958 ASIPP42127 132 aa16.92■□□□□ 0.3
SDF2L1-201ENST00000248958 CRIP1P50238 77 aa16.92■□□□□ 0.3
SDF2L1-201ENST00000248958 ZNF876PQ49A33 203 aa16.92■□□□□ 0.3
SDF2L1-201ENST00000248958 ZNF479Q96JC4 524 aa16.92■□□□□ 0.3
SDF2L1-201ENST00000248958 LINC00588Q9Y4M8 146 aa16.92■□□□□ 0.3
SDF2L1-201ENST00000248958 ICOSQ9Y6W8 199 aa16.92■□□□□ 0.3
SDF2L1-201ENST00000248958 A0A096LPF7 62 aa16.91■□□□□ 0.3
SDF2L1-201ENST00000248958 B4DEV8 164 aa16.91■□□□□ 0.3
SDF2L1-201ENST00000248958 SH2D1AO60880 128 aa16.91■□□□□ 0.3
SDF2L1-201ENST00000248958 SFTA3P0C7M3 94 aa16.91■□□□□ 0.3
SDF2L1-201ENST00000248958 RNASE3P12724 160 aaKnown RBP16.91■□□□□ 0.3
SDF2L1-201ENST00000248958 TAGLN2P37802 199 aaKnown RBP16.91■□□□□ 0.3
SDF2L1-201ENST00000248958 DNLZQ5SXM8 178 aa16.91■□□□□ 0.3
SDF2L1-201ENST00000248958 C11orf52Q96A22 123 aa16.91■□□□□ 0.3
SDF2L1-201ENST00000248958 C9JCJ5 164 aa16.9■□□□□ 0.3
SDF2L1-201ENST00000248958 PIK3CD-AS1Q5SR53 167 aa16.9■□□□□ 0.3
SDF2L1-201ENST00000248958 BAGE2Q86Y30 109 aa16.9■□□□□ 0.3
SDF2L1-201ENST00000248958 ZNRF2Q8NHG8 242 aa16.89■□□□□ 0.29
SDF2L1-201ENST00000248958 IL36BQ9NZH7 164 aa16.89■□□□□ 0.29
SDF2L1-201ENST00000248958 IGLV2-18A0A075B6J9 118 aa16.88■□□□□ 0.29
SDF2L1-201ENST00000248958 KRBOX1C9JBD0 128 aa16.88■□□□□ 0.29
SDF2L1-201ENST00000248958 PDE6DO43924 150 aa16.88■□□□□ 0.29
SDF2L1-201ENST00000248958 BLOC1S1P78537 153 aa16.88■□□□□ 0.29
SDF2L1-201ENST00000248958 MEF2BQ02080 365 aaPredicted RBP16.88■□□□□ 0.29
SDF2L1-201ENST00000248958 MRPL23Q16540 153 aaKnown RBP16.88■□□□□ 0.29
SDF2L1-201ENST00000248958 LINC01559Q495D7 138 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms