RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 FABP2P12104 132 aa16.48■□□□□ 0.23
SH2D3A-201ENST00000245908 PRR9Q5T870 116 aa16.48■□□□□ 0.23
SH2D3A-201ENST00000245908 AKAP6Q13023 2319 aa16.47■□□□□ 0.23
SH2D3A-201ENST00000245908 H3BUA1 57 aa16.47■□□□□ 0.23
SH2D3A-201ENST00000245908 NRACQ8N912 160 aa16.47■□□□□ 0.23
SH2D3A-201ENST00000245908 C10orf105Q8TEF2 133 aa16.47■□□□□ 0.23
SH2D3A-201ENST00000245908 ZMAT4Q9H898 229 aa16.47■□□□□ 0.23
SH2D3A-201ENST00000245908 SOCS3O14543 225 aa16.46■□□□□ 0.23
SH2D3A-201ENST00000245908 IGHG2P01859 326 aa16.46■□□□□ 0.23
SH2D3A-201ENST00000245908 IGHV4-38-2P0DP08 117 aa16.46■□□□□ 0.23
SH2D3A-201ENST00000245908 ODF1Q14990 250 aa16.46■□□□□ 0.23
SH2D3A-201ENST00000245908 TMEM158Q8WZ71 300 aa16.46■□□□□ 0.23
SH2D3A-201ENST00000245908 LINC00477Q96M19 166 aa16.46■□□□□ 0.23
SH2D3A-201ENST00000245908 SPANXN1Q5VSR9 72 aa16.45■□□□□ 0.22
SH2D3A-201ENST00000245908 RAB37Q96AX2 223 aa16.45■□□□□ 0.22
SH2D3A-201ENST00000245908 USMG5Q96IX5 58 aa16.45■□□□□ 0.22
SH2D3A-201ENST00000245908 SMPXQ9UHP9 88 aa16.45■□□□□ 0.22
SH2D3A-201ENST00000245908 SELENOKQ9Y6D0 94 aa16.45■□□□□ 0.22
SH2D3A-201ENST00000245908 PSMG4Q5JS54 123 aa16.45■□□□□ 0.22
SH2D3A-201ENST00000245908 UFC1Q9Y3C8 167 aa16.45■□□□□ 0.22
SH2D3A-201ENST00000245908 ITPR1Q14643 2758 aa16.44■□□□□ 0.22
SH2D3A-201ENST00000245908 A6NDX4 124 aa16.44■□□□□ 0.22
SH2D3A-201ENST00000245908 LY6EQ16553 131 aa16.44■□□□□ 0.22
SH2D3A-201ENST00000245908 CCL19Q99731 98 aa16.44■□□□□ 0.22
SH2D3A-201ENST00000245908 H3BVH4 76 aa16.44■□□□□ 0.22
SH2D3A-201ENST00000245908 OVOL1O14753 267 aa16.44■□□□□ 0.22
SH2D3A-201ENST00000245908 TCTAP57738 103 aa16.44■□□□□ 0.22
SH2D3A-201ENST00000245908 ZFAND2AQ8N6M9 145 aa16.43■□□□□ 0.22
SH2D3A-201ENST00000245908 NCOR2Q9Y618 2525 aa16.43■□□□□ 0.22
SH2D3A-201ENST00000245908 NMUP48645 174 aa16.43■□□□□ 0.22
SH2D3A-201ENST00000245908 SAMD5Q5TGI4 173 aa16.43■□□□□ 0.22
SH2D3A-201ENST00000245908 PCP2Q8IVA1 136 aa16.43■□□□□ 0.22
SH2D3A-201ENST00000245908 OR10J6PQ8NGY7 276 aa16.43■□□□□ 0.22
SH2D3A-201ENST00000245908 CHD8Q9HCK8 2581 aa16.42■□□□□ 0.22
SH2D3A-201ENST00000245908 TRAV26-2A0A0B4J265 109 aa16.42■□□□□ 0.22
SH2D3A-201ENST00000245908 H3BUX3 64 aa16.42■□□□□ 0.22
SH2D3A-201ENST00000245908 SIGMAR1Q99720 223 aa16.42■□□□□ 0.22
SH2D3A-201ENST00000245908 ATP5LO75964 103 aa16.42■□□□□ 0.22
SH2D3A-201ENST00000245908 PRSS1P07477 247 aa16.42■□□□□ 0.22
SH2D3A-201ENST00000245908 SMIM13P0DJ93 91 aa16.42■□□□□ 0.22
SH2D3A-201ENST00000245908 AZU1P20160 251 aa16.42■□□□□ 0.22
SH2D3A-201ENST00000245908 HHLA3Q9XRX5 114 aa16.42■□□□□ 0.22
SH2D3A-201ENST00000245908 TEX48A0A1B0GUV7 120 aa16.41■□□□□ 0.22
SH2D3A-201ENST00000245908 LAGE3Q14657 143 aa16.41■□□□□ 0.22
SH2D3A-201ENST00000245908 MRAP2Q96G30 205 aa16.41■□□□□ 0.22
SH2D3A-201ENST00000245908 TRAV21A0A0B4J279 112 aa16.4■□□□□ 0.22
SH2D3A-201ENST00000245908 RPL24P83731 157 aaKnown RBP16.4■□□□□ 0.22
SH2D3A-201ENST00000245908 IGHV3-11P01762 117 aa16.4■□□□□ 0.22
SH2D3A-201ENST00000245908 IGKCP01834 107 aa16.4■□□□□ 0.22
SH2D3A-201ENST00000245908 FOXC2Q99958 501 aa16.4■□□□□ 0.22
SH2D3A-201ENST00000245908 KLK15Q9H2R5 256 aa16.4■□□□□ 0.22
SH2D3A-201ENST00000245908 ZFHX3Q15911 3703 aa16.39■□□□□ 0.21
SH2D3A-201ENST00000245908 FAM19A4Q96LR4 140 aa16.39■□□□□ 0.21
SH2D3A-201ENST00000245908 PF4V1P10720 104 aa16.39■□□□□ 0.21
SH2D3A-201ENST00000245908 IGHV4-30-2A0A087WSY4 118 aa16.38■□□□□ 0.21
SH2D3A-201ENST00000245908 A0A1B0GV72 72 aa16.38■□□□□ 0.21
SH2D3A-201ENST00000245908 J3KRW8 73 aa16.38■□□□□ 0.21
SH2D3A-201ENST00000245908 HIGD1BQ9P298 99 aa16.38■□□□□ 0.21
SH2D3A-201ENST00000245908 DPM2O94777 84 aa16.37■□□□□ 0.21
SH2D3A-201ENST00000245908 IGLV1-40P01703 118 aa16.37■□□□□ 0.21
SH2D3A-201ENST00000245908 BLCAPP62952 87 aa16.37■□□□□ 0.21
SH2D3A-201ENST00000245908 IGKV2D-26A0A0A0MRZ7 120 aa16.36■□□□□ 0.21
SH2D3A-201ENST00000245908 MSMBP08118 114 aa16.36■□□□□ 0.21
SH2D3A-201ENST00000245908 ATP5J2P56134 94 aa16.36■□□□□ 0.21
SH2D3A-201ENST00000245908 SRSF1Q07955 248 aaKnown RBP eCLIP16.36■□□□□ 0.21
SH2D3A-201ENST00000245908 CD300EQ496F6 205 aaPredicted RBP16.36■□□□□ 0.21
SH2D3A-201ENST00000245908 APRG1Q8IVJ8 170 aa16.36■□□□□ 0.21
SH2D3A-201ENST00000245908 MYOZ3Q8TDC0 251 aa16.36■□□□□ 0.21
SH2D3A-201ENST00000245908 GTSF1LQ9H1H1 148 aa16.36■□□□□ 0.21
SH2D3A-201ENST00000245908 DEFB1P60022 68 aa16.36■□□□□ 0.21
SH2D3A-201ENST00000245908 Q6ZS46 218 aa16.36■□□□□ 0.21
SH2D3A-201ENST00000245908 SMIM2Q9BVW6 85 aa16.36■□□□□ 0.21
SH2D3A-201ENST00000245908 MED14OSP0DP75 135 aa16.35■□□□□ 0.21
SH2D3A-201ENST00000245908 ASIPP42127 132 aa16.35■□□□□ 0.21
SH2D3A-201ENST00000245908 FOXI2Q6ZQN5 318 aa16.35■□□□□ 0.21
SH2D3A-201ENST00000245908 TRBV7-9A0A0J9YWB2 115 aa16.35■□□□□ 0.21
SH2D3A-201ENST00000245908 RHPN1-AS1Q9BWJ2 59 aa16.35■□□□□ 0.21
SH2D3A-201ENST00000245908 TMEM8BA6NDV4 472 aa16.34■□□□□ 0.21
SH2D3A-201ENST00000245908 RPL11P62913 178 aaKnown RBP16.34■□□□□ 0.21
SH2D3A-201ENST00000245908 ANXA2RQ3ZCQ2 193 aa16.34■□□□□ 0.21
SH2D3A-201ENST00000245908 TMEM238LA0A1B0GVL6 79 aa16.34■□□□□ 0.21
SH2D3A-201ENST00000245908 J3QR89 54 aa16.34■□□□□ 0.21
SH2D3A-201ENST00000245908 M0R381 172 aa16.34■□□□□ 0.21
SH2D3A-201ENST00000245908 S100A4P26447 101 aaKnown RBP16.34■□□□□ 0.21
SH2D3A-201ENST00000245908 CFHR3Q02985 330 aa16.34■□□□□ 0.21
SH2D3A-201ENST00000245908 SMAGPQ0VAQ4 97 aa16.34■□□□□ 0.21
SH2D3A-201ENST00000245908 DPH3P1Q9H4G8 78 aa16.34■□□□□ 0.21
SH2D3A-201ENST00000245908 GAGE12HA6NDE8 117 aa16.33■□□□□ 0.2
SH2D3A-201ENST00000245908 HLA-DRB4P13762 266 aa16.33■□□□□ 0.2
SH2D3A-201ENST00000245908 LCNL1Q6ZST4 164 aa16.33■□□□□ 0.2
SH2D3A-201ENST00000245908 HLA-DRB4X5D2U9 266 aa16.33■□□□□ 0.2
SH2D3A-201ENST00000245908 F6UB75 175 aa16.33■□□□□ 0.2
SH2D3A-201ENST00000245908 TM4SF20Q53R12 229 aa16.33■□□□□ 0.2
SH2D3A-201ENST00000245908 SPATA25Q9BR10 227 aa16.33■□□□□ 0.2
SH2D3A-201ENST00000245908 DAZ1Q9NQZ3 744 aaKnown RBP16.33■□□□□ 0.2
SH2D3A-201ENST00000245908 MRPL35Q9NZE8 188 aaKnown RBP16.33■□□□□ 0.2
SH2D3A-201ENST00000245908 RNASE4P34096 147 aaKnown RBP16.32■□□□□ 0.2
SH2D3A-201ENST00000245908 FXYD2P54710 66 aa16.32■□□□□ 0.2
SH2D3A-201ENST00000245908 ZC2HC1BQ5TFG8 222 aa16.32■□□□□ 0.2
SH2D3A-201ENST00000245908 PHLDA1Q8WV24 401 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms