RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 FAM74A4Q5TZK3 123 aa9.11□□□□□ -0.95
SOX9-201ENST00000245479 C10orf126Q8N4M7 172 aa9.11□□□□□ -0.95
SOX9-201ENST00000245479 TRAV2A0A0B4J234 112 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 PRSS46E5RG02 174 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 G3V318 75 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 CRXO43186 299 aaPredicted RBP9.1□□□□□ -0.95
SOX9-201ENST00000245479 FAM106CPP0CH98 169 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 FAM106AQ4KMX7 169 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 TMEM155Q4W5P6 130 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 ORMDL2Q53FV1 153 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 CLEC19AQ6UXS0 136 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 RAX2Q96IS3 184 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 DPM3Q9P2X0 92 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 TRBV19A0A075B6N1 114 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 IGFL2Q6UWQ7 119 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 SHISA9B4DS77 424 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 RRN3P1Q2M238 152 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 OR10J6PQ8NGY7 276 aa9.1□□□□□ -0.95
SOX9-201ENST00000245479 SPAG8Q99932 426 aaPredicted RBP9.1□□□□□ -0.95
SOX9-201ENST00000245479 BUB1B-PAK6H3BSN5 160 aa9.09□□□□□ -0.95
SOX9-201ENST00000245479 DEFB1P60022 68 aa9.09□□□□□ -0.95
SOX9-201ENST00000245479 LYPD1Q8N2G4 141 aa9.09□□□□□ -0.95
SOX9-201ENST00000245479 METTL26Q96S19 204 aa9.09□□□□□ -0.95
SOX9-201ENST00000245479 TRAV8-4A0A0B4J246 113 aa9.09□□□□□ -0.95
SOX9-201ENST00000245479 EIF4EBP1Q13541 118 aaPredicted RBP9.09□□□□□ -0.95
SOX9-201ENST00000245479 NRGNQ92686 78 aa9.09□□□□□ -0.95
SOX9-201ENST00000245479 C2orf91Q6ZV80 131 aa9.09□□□□□ -0.95
SOX9-201ENST00000245479 RNF182Q8N6D2 247 aa9.09□□□□□ -0.95
SOX9-201ENST00000245479 SHANK2-AS3Q9BTD1 123 aa9.09□□□□□ -0.95
SOX9-201ENST00000245479 ERG28Q9UKR5 140 aa9.09□□□□□ -0.95
SOX9-201ENST00000245479 PRRC2AP48634 2157 aaKnown RBP9.08□□□□□ -0.96
SOX9-201ENST00000245479 EFNA4P52798 201 aa9.08□□□□□ -0.96
SOX9-201ENST00000245479 DGAT2L7PQ6IED9 249 aa9.08□□□□□ -0.96
SOX9-201ENST00000245479 C8orf86Q6ZUL3 223 aa9.08□□□□□ -0.96
SOX9-201ENST00000245479 C20orf78Q9BR46 151 aa9.08□□□□□ -0.96
SOX9-201ENST00000245479 FCN3O75636 299 aa9.08□□□□□ -0.96
SOX9-201ENST00000245479 ZANQ9Y493 2812 aa9.08□□□□□ -0.96
SOX9-201ENST00000245479 TRBV20-1A0A075B6N2 111 aa9.08□□□□□ -0.96
SOX9-201ENST00000245479 GAGE5Q13069 117 aa9.08□□□□□ -0.96
SOX9-201ENST00000245479 GAGE6Q13070 117 aa9.08□□□□□ -0.96
SOX9-201ENST00000245479 HIST2H2BDQ6DRA6 164 aa9.08□□□□□ -0.96
SOX9-201ENST00000245479 THAP8Q8NA92 274 aa9.08□□□□□ -0.96
SOX9-201ENST00000245479 IGHV3-64A0A075B6Q5 118 aa9.07□□□□□ -0.96
SOX9-201ENST00000245479 TMEM95Q3KNT9 176 aa9.07□□□□□ -0.96
SOX9-201ENST00000245479 KLF12Q9Y4X4 402 aa9.07□□□□□ -0.96
SOX9-201ENST00000245479 CGB3P0DN86 165 aa9.07□□□□□ -0.96
SOX9-201ENST00000245479 CGB7P0DN87 165 aa9.07□□□□□ -0.96
SOX9-201ENST00000245479 SLC25A16P16260 332 aa9.07□□□□□ -0.96
SOX9-201ENST00000245479 GATA4P43694 442 aa9.07□□□□□ -0.96
SOX9-201ENST00000245479 ERCC8Q13216 396 aa9.07□□□□□ -0.96
SOX9-201ENST00000245479 PAPPA-AS1Q5QFB9 102 aa9.07□□□□□ -0.96
SOX9-201ENST00000245479 MYMXA0A1B0GTQ4 84 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 GATA1P15976 413 aaPredicted RBP9.06□□□□□ -0.96
SOX9-201ENST00000245479 BPESC1Q9GZL8 116 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 C19orf71A6NCJ1 209 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 PRSS29PA6NIE9 313 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 NBR2O15453 112 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 ASIPP42127 132 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 TAL2Q16559 108 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 CCDC144NLQ6NUI1 221 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 ZNF833PQ6ZTB9 187 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 C1QTNF4Q9BXJ3 329 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 TRAV26-2A0A0B4J265 109 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 PF4V1P10720 104 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 HLA-DRB4P13762 266 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 IGFL3Q6UXB1 125 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 VMO1Q7Z5L0 202 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 SMIM20Q8N5G0 67 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 HLA-DRB4X5D2U9 266 aa9.06□□□□□ -0.96
SOX9-201ENST00000245479 GP9P14770 177 aa9.05□□□□□ -0.96
SOX9-201ENST00000245479 KLRB1Q12918 225 aa9.05□□□□□ -0.96
SOX9-201ENST00000245479 PRR25Q96S07 402 aa9.05□□□□□ -0.96
SOX9-201ENST00000245479 PRADC1Q9BSG0 188 aa9.05□□□□□ -0.96
SOX9-201ENST00000245479 Q8N8P6 123 aa9.05□□□□□ -0.96
SOX9-201ENST00000245479 PRSS22Q9GZN4 317 aa9.05□□□□□ -0.96
SOX9-201ENST00000245479 MSRB1Q9NZV6 116 aa9.05□□□□□ -0.96
SOX9-201ENST00000245479 VWC2LB2RUY7 222 aa9.05□□□□□ -0.96
SOX9-201ENST00000245479 NEGR1Q7Z3B1 354 aa9.05□□□□□ -0.96
SOX9-201ENST00000245479 ANKRD17O75179 2603 aaKnown RBP9.05□□□□□ -0.96
SOX9-201ENST00000245479 GAGE12JA6NER3 117 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 F8VRH5 84 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 GAGE7O76087 117 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 GAGE12FP0CL80 117 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 GAGE12GP0CL81 117 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 GAGE12IP0CL82 117 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 GNLYP22749 145 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 FOXI1Q12951 378 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 GAGE4Q13068 117 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 ZNF56Q15929 161 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 URB1-AS1Q96HZ7 61 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 FLNBO75369 2602 aaKnown RBP9.04□□□□□ -0.96
SOX9-201ENST00000245479 ZNF688P0C7X2 276 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 C11orf44Q8N8P7 122 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 NUP37Q8NFH4 326 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 HIGD1BQ9P298 99 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 PPP1R17O96001 155 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 C15orf32Q32M92 178 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 PTH2Q96A98 100 aa9.04□□□□□ -0.96
SOX9-201ENST00000245479 C3orf36Q3SXR2 165 aa9.03□□□□□ -0.96
SOX9-201ENST00000245479 TEX36Q5VZQ5 186 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms