RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SIGLEC8Q9NYZ4 499 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 NBASA2RRP1 2371 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 KALRNO60229 2985 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 IGLV5-52A0A0A0MRZ9 124 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 TMEM213A2RRL7 107 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 LINC01546A6NGU7 62 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 H3BUA1 57 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 NDUFS8O00217 210 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 CSN3P07498 182 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 ZNF80P51504 273 aaPredicted RBP5.98□□□□□ -1.45
CXCR4-201ENST00000241393 ZNF138P52744 262 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 ATP5G2Q06055 141 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 LGALS9BQ3B8N2 356 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 LGALS9CQ6DKI2 356 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 AMN1Q8IY45 258 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 Q8TAT8 98 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 SCRT2Q9NQ03 307 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 LENEPQ9Y5L5 61 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 CHD8Q9HCK8 2581 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 NCOR2Q9Y618 2525 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 HIVEP3Q5T1R4 2406 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 ATRXP46100 2492 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 WNK2Q9Y3S1 2297 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 TMSB15BA0A087X1C1 80 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 A0A096LNJ9 63 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 TRAV41A0A0B4J266 112 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 IGHV1-69DA0A0B4J2H0 117 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 IGHV1-69P01742 117 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 HBDP02042 147 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 CKS2P33552 79 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 IFI27P40305 119 aaPredicted RBP5.97□□□□□ -1.45
CXCR4-201ENST00000241393 CLEC19AQ6UXS0 136 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 C12orf54Q6X4T0 127 aa5.97□□□□□ -1.45
CXCR4-201ENST00000241393 SPTBN1Q01082 2364 aaKnown RBP5.97□□□□□ -1.45
CXCR4-201ENST00000241393 G3V318 75 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 TCF21O43680 179 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 IGHV4-39P01824 125 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 ORM1P02763 201 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 IGF1P05019 195 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 HLA-DMBP28068 263 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 TFPI2P48307 235 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 LY6DQ14210 128 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 TMEM78Q5T7P6 136 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 C9orf139Q6ZV77 190 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 DEFB125Q8N687 156 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 OR1N2Q8NGR9 330 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 MAP1LC3AQ9H492 121 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 NXT2Q9NPJ8 142 aaKnown RBP5.96□□□□□ -1.46
CXCR4-201ENST00000241393 ZZEF1O43149 2961 aa5.96□□□□□ -1.46
CXCR4-201ENST00000241393 CACNA1AO00555 2505 aa5.95□□□□□ -1.46
CXCR4-201ENST00000241393 IGHV4-4A0A075B6R2 117 aa5.95□□□□□ -1.46
CXCR4-201ENST00000241393 TRAV8-2A0A0B4J237 113 aa5.95□□□□□ -1.46
CXCR4-201ENST00000241393 TMEM8BA6NDV4 472 aa5.95□□□□□ -1.46
CXCR4-201ENST00000241393 PRAC2D3DTV9 90 aa5.95□□□□□ -1.46
CXCR4-201ENST00000241393 COX8AP10176 69 aa5.95□□□□□ -1.46
CXCR4-201ENST00000241393 HINT1P49773 126 aaPredicted RBP5.95□□□□□ -1.46
CXCR4-201ENST00000241393 ZNF738Q8NE65 137 aa5.95□□□□□ -1.46
CXCR4-201ENST00000241393 RNF185Q96GF1 192 aa5.95□□□□□ -1.46
CXCR4-201ENST00000241393 USMG5Q96IX5 58 aa5.95□□□□□ -1.46
CXCR4-201ENST00000241393 AGPAT4-IT1Q9H0P7 198 aa5.95□□□□□ -1.46
CXCR4-201ENST00000241393 IGHV3-35A0A0C4DH35 117 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 C19orf84I3L1E1 186 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 NDUFA4O00483 81 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 NPYP01303 97 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 CACNG7P62955 275 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 GAGE2BQ13066 116 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 GAGE2EQ4V326 116 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 GAGE2AQ6NT46 116 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 PIFOQ8TCI5 191 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 C10orf105Q8TEF2 133 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 GAGE2DQ9UEU5 116 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 ZNF580Q9UK33 172 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 COL6A6A6NMZ7 2263 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 HRNRQ86YZ3 2850 aaPredicted RBP5.94□□□□□ -1.46
CXCR4-201ENST00000241393 IGKV3D-20A0A0C4DH25 116 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 TRBV7-9A0A0J9YWB2 115 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 LOC389332A0A1B0GUA5 103 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 SNAI2O43623 268 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 LOXL1Q08397 574 aaPredicted RBP5.94□□□□□ -1.46
CXCR4-201ENST00000241393 ERCC8Q13216 396 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 BVES-AS1Q5T3Y7 98 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 IL17RELQ6ZVW7 336 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 SMIM15Q7Z3B0 74 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 IFI27L1Q96BM0 104 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 LINC00477Q96M19 166 aa5.94□□□□□ -1.46
CXCR4-201ENST00000241393 IGHV3OR16-8A0A075B7F1 116 aa5.93□□□□□ -1.46
CXCR4-201ENST00000241393 OVOL1O14753 267 aa5.93□□□□□ -1.46
CXCR4-201ENST00000241393 SIVA1O15304 175 aa5.93□□□□□ -1.46
CXCR4-201ENST00000241393 IGHG2P01859 326 aa5.93□□□□□ -1.46
CXCR4-201ENST00000241393 TRGV3P03979 118 aa5.93□□□□□ -1.46
CXCR4-201ENST00000241393 FCER1GP30273 86 aa5.93□□□□□ -1.46
CXCR4-201ENST00000241393 UQCRFS1P47985 274 aa5.93□□□□□ -1.46
CXCR4-201ENST00000241393 FAM106AQ4KMX7 169 aa5.93□□□□□ -1.46
CXCR4-201ENST00000241393 RNF182Q8N6D2 247 aa5.93□□□□□ -1.46
CXCR4-201ENST00000241393 OR8A1Q8NGG7 326 aa5.93□□□□□ -1.46
CXCR4-201ENST00000241393 DUX5Q96PT3 197 aa5.93□□□□□ -1.46
CXCR4-201ENST00000241393 MED13LQ71F56 2210 aa5.92□□□□□ -1.46
CXCR4-201ENST00000241393 IGHV4-61A0A0C4DH41 118 aa5.92□□□□□ -1.46
CXCR4-201ENST00000241393 A6NDX4 124 aa5.92□□□□□ -1.46
CXCR4-201ENST00000241393 NCR2O95944 276 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms